RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 DOT1LQ8TEK3 1739 aa14.64□□□□□ -0.07
RETREG3-209ENST00000590035 ZBTB7AO95365 584 aa14.63□□□□□ -0.07
RETREG3-209ENST00000590035 ZNF827Q17R98 1081 aa14.63□□□□□ -0.07
RETREG3-209ENST00000590035 NCAPD2Q15021 1401 aa14.63□□□□□ -0.07
RETREG3-209ENST00000590035 ANKRD26Q9UPS8 1709 aa14.63□□□□□ -0.07
RETREG3-209ENST00000590035 KIF24Q5T7B8 1368 aa14.62□□□□□ -0.07
RETREG3-209ENST00000590035 TMF1P82094 1093 aa14.62□□□□□ -0.07
RETREG3-209ENST00000590035 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
RETREG3-209ENST00000590035 MTFR1LQ9H019 292 aa14.62□□□□□ -0.07
RETREG3-209ENST00000590035 TUBGCP6Q96RT7 1819 aa14.62□□□□□ -0.07
RETREG3-209ENST00000590035 MAP3K5Q99683 1374 aa14.61□□□□□ -0.07
RETREG3-209ENST00000590035 RRS1Q15050 365 aaKnown RBP14.61□□□□□ -0.07
RETREG3-209ENST00000590035 NBPF6Q5VWK0 638 aa14.61□□□□□ -0.07
RETREG3-209ENST00000590035 LTV1Q96GA3 475 aaPredicted RBP14.61□□□□□ -0.07
RETREG3-209ENST00000590035 NBPF4Q96M43 638 aa14.61□□□□□ -0.07
RETREG3-209ENST00000590035 PPP1R1BQ9UD71 204 aaPredicted RBP14.61□□□□□ -0.07
RETREG3-209ENST00000590035 TIMELESSQ9UNS1 1208 aa14.61□□□□□ -0.07
RETREG3-209ENST00000590035 KAT6BQ8WYB5 2073 aa14.61□□□□□ -0.07
RETREG3-209ENST00000590035 INSRP06213 1382 aa14.6□□□□□ -0.07
RETREG3-209ENST00000590035 SLC27A3Q5K4L6 730 aa14.6□□□□□ -0.07
RETREG3-209ENST00000590035 CARD14Q9BXL6 1004 aa14.6□□□□□ -0.07
RETREG3-209ENST00000590035 GGNBP2Q9H3C7 697 aa14.6□□□□□ -0.07
RETREG3-209ENST00000590035 AMPHP49418 695 aa14.59□□□□□ -0.07
RETREG3-209ENST00000590035 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
RETREG3-209ENST00000590035 CGNL1Q0VF96 1302 aa14.59□□□□□ -0.07
RETREG3-209ENST00000590035 ZCRB1Q8TBF4 217 aaKnown RBP14.58□□□□□ -0.08
RETREG3-209ENST00000590035 DDX54Q8TDD1 881 aaKnown RBP14.58□□□□□ -0.08
RETREG3-209ENST00000590035 CLSPNQ9HAW4 1339 aa14.58□□□□□ -0.08
RETREG3-209ENST00000590035 FLT4P35916 1363 aa14.58□□□□□ -0.08
RETREG3-209ENST00000590035 PKD1L3Q7Z443 1732 aa14.58□□□□□ -0.08
RETREG3-209ENST00000590035 PRIM1P49642 420 aaKnown RBP14.57□□□□□ -0.08
RETREG3-209ENST00000590035 CDCA8Q53HL2 280 aa14.57□□□□□ -0.08
RETREG3-209ENST00000590035 TOGARAM1Q9Y4F4 1720 aa14.56□□□□□ -0.08
RETREG3-209ENST00000590035 GOLGB1Q14789 3259 aaKnown RBP14.56□□□□□ -0.08
RETREG3-209ENST00000590035 HSP90AB2PQ58FF8 381 aa14.56□□□□□ -0.08
RETREG3-209ENST00000590035 SYT17Q9BSW7 474 aa14.56□□□□□ -0.08
RETREG3-209ENST00000590035 FHDC1Q9C0D6 1143 aaPredicted RBP14.56□□□□□ -0.08
RETREG3-209ENST00000590035 PNPLA7Q6ZV29 1317 aa14.56□□□□□ -0.08
RETREG3-209ENST00000590035 NSD3Q9BZ95 1437 aa14.56□□□□□ -0.08
RETREG3-209ENST00000590035 YY1P25490 414 aa14.55□□□□□ -0.08
RETREG3-209ENST00000590035 SMG6Q86US8 1419 aaKnown RBP14.55□□□□□ -0.08
RETREG3-209ENST00000590035 USHBP1Q8N6Y0 703 aa14.54□□□□□ -0.08
RETREG3-209ENST00000590035 SLC16A10Q8TF71 515 aa14.54□□□□□ -0.08
RETREG3-209ENST00000590035 ARXQ96QS3 562 aa14.53□□□□□ -0.08
RETREG3-209ENST00000590035 EMILIN1Q9Y6C2 1016 aa14.52□□□□□ -0.09
RETREG3-209ENST00000590035 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.09
RETREG3-209ENST00000590035 WASHC2AQ641Q2 1341 aa14.51□□□□□ -0.09
RETREG3-209ENST00000590035 CYP27B1O15528 508 aa14.51□□□□□ -0.09
RETREG3-209ENST00000590035 KCNQ4P56696 695 aa14.51□□□□□ -0.09
RETREG3-209ENST00000590035 C5P01031 1676 aa14.51□□□□□ -0.09
RETREG3-209ENST00000590035 MAP2P11137 1827 aaKnown RBP14.5□□□□□ -0.09
RETREG3-209ENST00000590035 ITGB4P16144 1822 aa14.5□□□□□ -0.09
RETREG3-209ENST00000590035 PCDH11XQ9BZA7 1347 aa14.5□□□□□ -0.09
RETREG3-209ENST00000590035 PCDH11YQ9BZA8 1340 aa14.5□□□□□ -0.09
RETREG3-209ENST00000590035 RAPGEF4Q8WZA2 1011 aa14.5□□□□□ -0.09
RETREG3-209ENST00000590035 PLEKHG2Q9H7P9 1386 aa14.49□□□□□ -0.09
RETREG3-209ENST00000590035 CHD4Q14839 1912 aa14.49□□□□□ -0.09
RETREG3-209ENST00000590035 TATP17735 454 aaPredicted RBP14.49□□□□□ -0.09
RETREG3-209ENST00000590035 NKX1-1Q15270 411 aaPredicted RBP14.49□□□□□ -0.09
RETREG3-209ENST00000590035 SYTL4Q96C24 671 aaPredicted RBP14.49□□□□□ -0.09
RETREG3-209ENST00000590035 POLKQ9UBT6 870 aa14.48□□□□□ -0.09
RETREG3-209ENST00000590035 CCNL1Q9UK58 526 aaPredicted RBP14.48□□□□□ -0.09
RETREG3-209ENST00000590035 TFCP2L1Q9NZI6 479 aa14.47□□□□□ -0.09
RETREG3-209ENST00000590035 PALLDQ8WX93 1383 aa14.47□□□□□ -0.09
RETREG3-209ENST00000590035 COL23A1Q86Y22 540 aaPredicted RBP14.46□□□□□ -0.09
RETREG3-209ENST00000590035 EYA1Q99502 592 aa14.46□□□□□ -0.09
RETREG3-209ENST00000590035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.46□□□□□ -0.09
RETREG3-209ENST00000590035 C4BP0C0L5 1744 aa14.45□□□□□ -0.1
RETREG3-209ENST00000590035 UBR3Q6ZT12 1888 aa14.45□□□□□ -0.1
RETREG3-209ENST00000590035 ZNF784Q8NCA9 323 aaPredicted RBP14.44□□□□□ -0.1
RETREG3-209ENST00000590035 AMIGO3Q86WK7 504 aa14.43□□□□□ -0.1
RETREG3-209ENST00000590035 PIGBQ92521 554 aa14.43□□□□□ -0.1
RETREG3-209ENST00000590035 POLD1P28340 1107 aa14.42□□□□□ -0.1
RETREG3-209ENST00000590035 IGSF1Q8N6C5 1336 aa14.41□□□□□ -0.1
RETREG3-209ENST00000590035 EIF4A2Q14240 407 aaKnown RBP14.41□□□□□ -0.1
RETREG3-209ENST00000590035 MPRIPQ6WCQ1 1025 aa14.41□□□□□ -0.1
RETREG3-209ENST00000590035 NLGN2Q8NFZ4 835 aa14.41□□□□□ -0.1
RETREG3-209ENST00000590035 ZNF831Q5JPB2 1677 aa14.41□□□□□ -0.1
RETREG3-209ENST00000590035 HSPA5P11021 654 aaKnown RBP14.4□□□□□ -0.1
RETREG3-209ENST00000590035 PHKG2P15735 406 aa14.4□□□□□ -0.1
RETREG3-209ENST00000590035 HMGB2P26583 209 aaKnown RBP14.4□□□□□ -0.1
RETREG3-209ENST00000590035 SMARCC1Q92922 1105 aaPredicted RBP14.4□□□□□ -0.1
RETREG3-209ENST00000590035 SPG7Q9UQ90 795 aa14.4□□□□□ -0.1
RETREG3-209ENST00000590035 KDRP35968 1356 aa14.39□□□□□ -0.11
RETREG3-209ENST00000590035 EIF4G2P78344 907 aaKnown RBP eCLIP14.39□□□□□ -0.11
RETREG3-209ENST00000590035 FLAD1Q8NFF5 587 aa14.39□□□□□ -0.11
RETREG3-209ENST00000590035 PPM1GO15355 546 aaPredicted RBP14.38□□□□□ -0.11
RETREG3-209ENST00000590035 LOC102724428A0A0B4J2F2 783 aa14.37□□□□□ -0.11
RETREG3-209ENST00000590035 SIK1P57059 783 aa14.37□□□□□ -0.11
RETREG3-209ENST00000590035 IFNL2Q8IZJ0 200 aa14.37□□□□□ -0.11
RETREG3-209ENST00000590035 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
RETREG3-209ENST00000590035 PCGF6Q9BYE7 350 aa14.37□□□□□ -0.11
RETREG3-209ENST00000590035 PANK3Q9H999 370 aa14.37□□□□□ -0.11
RETREG3-209ENST00000590035 YBX3P16989 372 aaKnown RBP eCLIP14.36□□□□□ -0.11
RETREG3-209ENST00000590035 ITPK1Q13572 414 aa14.36□□□□□ -0.11
RETREG3-209ENST00000590035 COL5A3P25940 1745 aaPredicted RBP14.35□□□□□ -0.11
RETREG3-209ENST00000590035 KDM6AO15550 1401 aaPredicted RBP14.35□□□□□ -0.11
RETREG3-209ENST00000590035 GPR162Q16538 588 aa14.35□□□□□ -0.11
RETREG3-209ENST00000590035 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
RETREG3-209ENST00000590035 ATG3Q9NT62 314 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms