RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 ZCRB1Q8TBF4 217 aaKnown RBP26.6■■□□□ 1.85
PTBP1-215ENST00000589883 NSD3Q9BZ95 1437 aa26.59■■□□□ 1.85
PTBP1-215ENST00000589883 CGNL1Q0VF96 1302 aa26.59■■□□□ 1.85
PTBP1-215ENST00000589883 SYTL4Q96C24 671 aaPredicted RBP26.58■■□□□ 1.85
PTBP1-215ENST00000589883 GGNBP2Q9H3C7 697 aa26.58■■□□□ 1.85
PTBP1-215ENST00000589883 FBLN1P23142 703 aa26.57■■□□□ 1.84
PTBP1-215ENST00000589883 PAPPAQ13219 1627 aa26.57■■□□□ 1.84
PTBP1-215ENST00000589883 RRS1Q15050 365 aaKnown RBP26.56■■□□□ 1.84
PTBP1-215ENST00000589883 PRIM1P49642 420 aaKnown RBP26.55■■□□□ 1.84
PTBP1-215ENST00000589883 RAPGEF4Q8WZA2 1011 aa26.55■■□□□ 1.84
PTBP1-215ENST00000589883 LRRC4BQ9NT99 713 aa26.55■■□□□ 1.84
PTBP1-215ENST00000589883 SLC16A10Q8TF71 515 aa26.54■■□□□ 1.84
PTBP1-215ENST00000589883 FHDC1Q9C0D6 1143 aaPredicted RBP26.54■■□□□ 1.84
PTBP1-215ENST00000589883 KIF24Q5T7B8 1368 aa26.54■■□□□ 1.84
PTBP1-215ENST00000589883 ARXQ96QS3 562 aa26.53■■□□□ 1.84
PTBP1-215ENST00000589883 SGIP1Q9BQI5 828 aa26.53■■□□□ 1.84
PTBP1-215ENST00000589883 SYT17Q9BSW7 474 aa26.53■■□□□ 1.84
PTBP1-215ENST00000589883 RGPD2P0DJD1 1756 aa26.52■■□□□ 1.84
PTBP1-215ENST00000589883 HMGB2P26583 209 aaKnown RBP26.52■■□□□ 1.84
PTBP1-215ENST00000589883 ZNF827Q17R98 1081 aa26.52■■□□□ 1.84
PTBP1-215ENST00000589883 NBPF6Q5VWK0 638 aa26.52■■□□□ 1.84
PTBP1-215ENST00000589883 NBPF4Q96M43 638 aa26.52■■□□□ 1.84
PTBP1-215ENST00000589883 TATP17735 454 aaPredicted RBP26.51■■□□□ 1.83
PTBP1-215ENST00000589883 AKT1S1Q96B36 256 aa26.51■■□□□ 1.83
PTBP1-215ENST00000589883 MEGF6O75095 1541 aa26.5■■□□□ 1.83
PTBP1-215ENST00000589883 INSRP06213 1382 aa26.5■■□□□ 1.83
PTBP1-215ENST00000589883 FLT4P35916 1363 aa26.5■■□□□ 1.83
PTBP1-215ENST00000589883 KIF20BQ96Q89 1820 aa26.5■■□□□ 1.83
PTBP1-215ENST00000589883 DOT1LQ8TEK3 1739 aa26.49■■□□□ 1.83
PTBP1-215ENST00000589883 TFCP2L1Q9NZI6 479 aa26.48■■□□□ 1.83
PTBP1-215ENST00000589883 ZNF316A6NFI3 1004 aaPredicted RBP26.47■■□□□ 1.83
PTBP1-215ENST00000589883 POLD1P28340 1107 aa26.47■■□□□ 1.83
PTBP1-215ENST00000589883 KNSTRNQ9Y448 316 aa26.47■■□□□ 1.83
PTBP1-215ENST00000589883 QSER1Q2KHR3 1735 aa26.47■■□□□ 1.83
PTBP1-215ENST00000589883 MAP3K5Q99683 1374 aa26.46■■□□□ 1.83
PTBP1-215ENST00000589883 HSP90AB2PQ58FF8 381 aa26.46■■□□□ 1.83
PTBP1-215ENST00000589883 USHBP1Q8N6Y0 703 aa26.46■■□□□ 1.83
PTBP1-215ENST00000589883 SHANK3Q9BYB0 1731 aa26.45■■□□□ 1.83
PTBP1-215ENST00000589883 PCDH11XQ9BZA7 1347 aa26.45■■□□□ 1.83
PTBP1-215ENST00000589883 PCDH11YQ9BZA8 1340 aa26.45■■□□□ 1.83
PTBP1-215ENST00000589883 CCNL1Q9UK58 526 aaPredicted RBP26.45■■□□□ 1.82
PTBP1-215ENST00000589883 NSD2O96028 1365 aa26.44■■□□□ 1.82
PTBP1-215ENST00000589883 LY75O60449 1722 aa26.43■■□□□ 1.82
PTBP1-215ENST00000589883 PNPLA7Q6ZV29 1317 aa26.42■■□□□ 1.82
PTBP1-215ENST00000589883 PER1O15534 1290 aaPredicted RBP26.42■■□□□ 1.82
PTBP1-215ENST00000589883 DDX10Q13206 875 aaKnown RBP26.42■■□□□ 1.82
PTBP1-215ENST00000589883 KCNQ4P56696 695 aa26.39■■□□□ 1.82
PTBP1-215ENST00000589883 CNGB1Q14028 1251 aaPredicted RBP26.39■■□□□ 1.82
PTBP1-215ENST00000589883 AMER1Q5JTC6 1135 aaPredicted RBP26.38■■□□□ 1.81
PTBP1-215ENST00000589883 PPM1GO15355 546 aaPredicted RBP26.37■■□□□ 1.81
PTBP1-215ENST00000589883 EMILIN1Q9Y6C2 1016 aa26.36■■□□□ 1.81
PTBP1-215ENST00000589883 MSH5O43196 834 aa26.35■■□□□ 1.81
PTBP1-215ENST00000589883 CC2D1BQ5T0F9 858 aaKnown RBP26.35■■□□□ 1.81
PTBP1-215ENST00000589883 KLHL34Q8N239 644 aa26.35■■□□□ 1.81
PTBP1-215ENST00000589883 CHD4Q14839 1912 aa26.35■■□□□ 1.81
PTBP1-215ENST00000589883 GPR162Q16538 588 aa26.34■■□□□ 1.81
PTBP1-215ENST00000589883 SMARCC1Q92922 1105 aaPredicted RBP26.34■■□□□ 1.81
PTBP1-215ENST00000589883 SPG7Q9UQ90 795 aa26.34■■□□□ 1.81
PTBP1-215ENST00000589883 TUBGCP6Q96RT7 1819 aa26.33■■□□□ 1.81
PTBP1-215ENST00000589883 TNNT2P45379 298 aaPredicted RBP26.33■■□□□ 1.81
PTBP1-215ENST00000589883 MPRIPQ6WCQ1 1025 aa26.33■■□□□ 1.81
PTBP1-215ENST00000589883 FLAD1Q8NFF5 587 aa26.33■■□□□ 1.81
PTBP1-215ENST00000589883 COL24A1Q17RW2 1714 aa26.33■■□□□ 1.81
PTBP1-215ENST00000589883 CYP27B1O15528 508 aa26.32■■□□□ 1.8
PTBP1-215ENST00000589883 MORC1Q86VD1 984 aa26.32■■□□□ 1.8
PTBP1-215ENST00000589883 PALLDQ8WX93 1383 aa26.32■■□□□ 1.8
PTBP1-215ENST00000589883 UTRNP46939 3433 aa26.31■■□□□ 1.8
PTBP1-215ENST00000589883 COL23A1Q86Y22 540 aaPredicted RBP26.29■■□□□ 1.8
PTBP1-215ENST00000589883 ZNF784Q8NCA9 323 aaPredicted RBP26.29■■□□□ 1.8
PTBP1-215ENST00000589883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.29■■□□□ 1.8
PTBP1-215ENST00000589883 MAP2P11137 1827 aaKnown RBP26.29■■□□□ 1.8
PTBP1-215ENST00000589883 NCAPD2Q15021 1401 aa26.29■■□□□ 1.8
PTBP1-215ENST00000589883 PKD1L3Q7Z443 1732 aa26.28■■□□□ 1.8
PTBP1-215ENST00000589883 ANKRD26Q9UPS8 1709 aa26.28■■□□□ 1.8
PTBP1-215ENST00000589883 NKX1-1Q15270 411 aaPredicted RBP26.28■■□□□ 1.8
PTBP1-215ENST00000589883 C5P01031 1676 aa26.27■■□□□ 1.8
PTBP1-215ENST00000589883 NPC1L1Q9UHC9 1359 aa26.26■■□□□ 1.79
PTBP1-215ENST00000589883 EYA1Q99502 592 aa26.26■■□□□ 1.79
PTBP1-215ENST00000589883 POLKQ9UBT6 870 aa26.26■■□□□ 1.79
PTBP1-215ENST00000589883 ITGB4P16144 1822 aa26.24■■□□□ 1.79
PTBP1-215ENST00000589883 PELP1Q8IZL8 1130 aaKnown RBP26.24■■□□□ 1.79
PTBP1-215ENST00000589883 AK7Q96M32 723 aa26.24■■□□□ 1.79
PTBP1-215ENST00000589883 PLEKHG2Q9H7P9 1386 aa26.22■■□□□ 1.79
PTBP1-215ENST00000589883 IFNL2Q8IZJ0 200 aa26.22■■□□□ 1.79
PTBP1-215ENST00000589883 PIGBQ92521 554 aa26.22■■□□□ 1.79
PTBP1-215ENST00000589883 TMOD3Q9NYL9 352 aa26.22■■□□□ 1.79
PTBP1-215ENST00000589883 TAF1LQ8IZX4 1826 aa26.22■■□□□ 1.79
PTBP1-215ENST00000589883 TOGARAM1Q9Y4F4 1720 aa26.2■■□□□ 1.79
PTBP1-215ENST00000589883 GRIN3BO60391 1043 aa26.2■■□□□ 1.78
PTBP1-215ENST00000589883 MSL1Q68DK7 614 aa26.19■■□□□ 1.78
PTBP1-215ENST00000589883 NLGN2Q8NFZ4 835 aa26.19■■□□□ 1.78
PTBP1-215ENST00000589883 C4BP0C0L5 1744 aa26.17■■□□□ 1.78
PTBP1-215ENST00000589883 LOC102724428A0A0B4J2F2 783 aa26.17■■□□□ 1.78
PTBP1-215ENST00000589883 PHKG2P15735 406 aa26.17■■□□□ 1.78
PTBP1-215ENST00000589883 SIK1P57059 783 aa26.17■■□□□ 1.78
PTBP1-215ENST00000589883 EIF4A2Q14240 407 aaKnown RBP26.17■■□□□ 1.78
PTBP1-215ENST00000589883 CD2APQ9Y5K6 639 aa26.17■■□□□ 1.78
PTBP1-215ENST00000589883 HSP90AB1P08238 724 aaKnown RBP26.14■■□□□ 1.78
PTBP1-215ENST00000589883 SSFA2P28290 1259 aa26.14■■□□□ 1.78
PTBP1-215ENST00000589883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms