RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 RAPGEF4Q8WZA2 1011 aa19.87■□□□□ 0.77
MBD1-220ENST00000589758 MEGF6O75095 1541 aa19.86■□□□□ 0.77
MBD1-220ENST00000589758 TATP17735 454 aaPredicted RBP19.85■□□□□ 0.77
MBD1-220ENST00000589758 PRIM1P49642 420 aaKnown RBP19.84■□□□□ 0.77
MBD1-220ENST00000589758 SLC27A3Q5K4L6 730 aa19.84■□□□□ 0.77
MBD1-220ENST00000589758 USHBP1Q8N6Y0 703 aa19.84■□□□□ 0.77
MBD1-220ENST00000589758 POLR3GLQ9BT43 218 aa19.84■□□□□ 0.77
MBD1-220ENST00000589758 SHANK3Q9BYB0 1731 aa19.83■□□□□ 0.77
MBD1-220ENST00000589758 SYTL4Q96C24 671 aaPredicted RBP19.83■□□□□ 0.77
MBD1-220ENST00000589758 PDGFDQ9GZP0 370 aaPredicted RBP19.83■□□□□ 0.77
MBD1-220ENST00000589758 ZBTB7AO95365 584 aa19.82■□□□□ 0.76
MBD1-220ENST00000589758 EMILIN1Q9Y6C2 1016 aa19.82■□□□□ 0.76
MBD1-220ENST00000589758 PAPPAQ13219 1627 aa19.82■□□□□ 0.76
MBD1-220ENST00000589758 HSPA5P11021 654 aaKnown RBP19.81■□□□□ 0.76
MBD1-220ENST00000589758 LRRC4BQ9NT99 713 aa19.81■□□□□ 0.76
MBD1-220ENST00000589758 DOT1LQ8TEK3 1739 aa19.81■□□□□ 0.76
MBD1-220ENST00000589758 MTFR1LQ9H019 292 aa19.8■□□□□ 0.76
MBD1-220ENST00000589758 WASHC2AQ641Q2 1341 aa19.79■□□□□ 0.76
MBD1-220ENST00000589758 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
MBD1-220ENST00000589758 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
MBD1-220ENST00000589758 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
MBD1-220ENST00000589758 PPM1GO15355 546 aaPredicted RBP19.79■□□□□ 0.76
MBD1-220ENST00000589758 ATF5Q9Y2D1 282 aaPredicted RBP19.79■□□□□ 0.76
MBD1-220ENST00000589758 ANKRD26Q9UPS8 1709 aa19.79■□□□□ 0.76
MBD1-220ENST00000589758 PTGER2P43116 358 aa19.78■□□□□ 0.76
MBD1-220ENST00000589758 NSD2O96028 1365 aa19.78■□□□□ 0.76
MBD1-220ENST00000589758 MAP2P11137 1827 aaKnown RBP19.77■□□□□ 0.76
MBD1-220ENST00000589758 ZNF827Q17R98 1081 aa19.76■□□□□ 0.75
MBD1-220ENST00000589758 AKT1S1Q96B36 256 aa19.76■□□□□ 0.75
MBD1-220ENST00000589758 POLKQ9UBT6 870 aa19.76■□□□□ 0.75
MBD1-220ENST00000589758 LY75O60449 1722 aa19.76■□□□□ 0.75
MBD1-220ENST00000589758 NCAPD2Q15021 1401 aa19.76■□□□□ 0.75
MBD1-220ENST00000589758 HMGB2P26583 209 aaKnown RBP19.75■□□□□ 0.75
MBD1-220ENST00000589758 PANK3Q9H999 370 aa19.75■□□□□ 0.75
MBD1-220ENST00000589758 SLC16A10Q8TF71 515 aa19.73■□□□□ 0.75
MBD1-220ENST00000589758 CCNL1Q9UK58 526 aaPredicted RBP19.73■□□□□ 0.75
MBD1-220ENST00000589758 SPG7Q9UQ90 795 aa19.73■□□□□ 0.75
MBD1-220ENST00000589758 QSER1Q2KHR3 1735 aa19.73■□□□□ 0.75
MBD1-220ENST00000589758 CYP27B1O15528 508 aa19.72■□□□□ 0.75
MBD1-220ENST00000589758 EYA1Q99502 592 aa19.72■□□□□ 0.75
MBD1-220ENST00000589758 SGIP1Q9BQI5 828 aa19.72■□□□□ 0.75
MBD1-220ENST00000589758 TFCP2L1Q9NZI6 479 aa19.72■□□□□ 0.75
MBD1-220ENST00000589758 PKD1L3Q7Z443 1732 aa19.71■□□□□ 0.75
MBD1-220ENST00000589758 TNNT2P45379 298 aaPredicted RBP19.71■□□□□ 0.75
MBD1-220ENST00000589758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.71■□□□□ 0.751e-7■□□□□ 11
MBD1-220ENST00000589758 KCNQ4P56696 695 aa19.7■□□□□ 0.74
MBD1-220ENST00000589758 MPRIPQ6WCQ1 1025 aa19.69■□□□□ 0.74
MBD1-220ENST00000589758 ARXQ96QS3 562 aa19.69■□□□□ 0.74
MBD1-220ENST00000589758 PNPLA7Q6ZV29 1317 aa19.69■□□□□ 0.74
MBD1-220ENST00000589758 EIF4A2Q14240 407 aaKnown RBP19.68■□□□□ 0.74
MBD1-220ENST00000589758 NKX1-1Q15270 411 aaPredicted RBP19.68■□□□□ 0.74
MBD1-220ENST00000589758 SYT17Q9BSW7 474 aa19.68■□□□□ 0.74
MBD1-220ENST00000589758 FHDC1Q9C0D6 1143 aaPredicted RBP19.68■□□□□ 0.74
MBD1-220ENST00000589758 SMARCC1Q92922 1105 aaPredicted RBP19.67■□□□□ 0.74
MBD1-220ENST00000589758 PLEKHG2Q9H7P9 1386 aa19.67■□□□□ 0.74
MBD1-220ENST00000589758 POLD1P28340 1107 aa19.66■□□□□ 0.74
MBD1-220ENST00000589758 KNSTRNQ9Y448 316 aa19.66■□□□□ 0.74
MBD1-220ENST00000589758 PALLDQ8WX93 1383 aa19.66■□□□□ 0.74
MBD1-220ENST00000589758 ITGB4P16144 1822 aa19.65■□□□□ 0.74
MBD1-220ENST00000589758 YY1P25490 414 aa19.65■□□□□ 0.74
MBD1-220ENST00000589758 MORC1Q86VD1 984 aa19.65■□□□□ 0.74
MBD1-220ENST00000589758 IFNL2Q8IZJ0 200 aa19.65■□□□□ 0.74
MBD1-220ENST00000589758 TUBGCP6Q96RT7 1819 aa19.65■□□□□ 0.74
MBD1-220ENST00000589758 MAP3K5Q99683 1374 aa19.64■□□□□ 0.73
MBD1-220ENST00000589758 TOGARAM1Q9Y4F4 1720 aa19.64■□□□□ 0.73
MBD1-220ENST00000589758 IGSF1Q8N6C5 1336 aa19.63■□□□□ 0.73
MBD1-220ENST00000589758 PHKG2P15735 406 aa19.63■□□□□ 0.73
MBD1-220ENST00000589758 COL24A1Q17RW2 1714 aa19.62■□□□□ 0.73
MBD1-220ENST00000589758 C5P01031 1676 aa19.62■□□□□ 0.73
MBD1-220ENST00000589758 PIGBQ92521 554 aa19.62■□□□□ 0.73
MBD1-220ENST00000589758 FLAD1Q8NFF5 587 aa19.61■□□□□ 0.73
MBD1-220ENST00000589758 TMOD3Q9NYL9 352 aa19.61■□□□□ 0.73
MBD1-220ENST00000589758 MSH5O43196 834 aa19.6■□□□□ 0.73
MBD1-220ENST00000589758 COL23A1Q86Y22 540 aaPredicted RBP19.6■□□□□ 0.73
MBD1-220ENST00000589758 KIF7Q2M1P5 1343 aa19.59■□□□□ 0.73
MBD1-220ENST00000589758 TAF1LQ8IZX4 1826 aa19.59■□□□□ 0.73
MBD1-220ENST00000589758 HSP90AB1P08238 724 aaKnown RBP19.58■□□□□ 0.72
MBD1-220ENST00000589758 AMOTQ4VCS5 1084 aa19.58■□□□□ 0.72
MBD1-220ENST00000589758 PLEKHO1Q53GL0 409 aaPredicted RBP19.58■□□□□ 0.72
MBD1-220ENST00000589758 AMER1Q5JTC6 1135 aaPredicted RBP19.57■□□□□ 0.72
MBD1-220ENST00000589758 LOC102724428A0A0B4J2F2 783 aa19.56■□□□□ 0.72
MBD1-220ENST00000589758 SIK1P57059 783 aa19.56■□□□□ 0.72
MBD1-220ENST00000589758 AK7Q96M32 723 aa19.56■□□□□ 0.72
MBD1-220ENST00000589758 ERVV-2B6SEH9 535 aa19.55■□□□□ 0.72
MBD1-220ENST00000589758 C4BP0C0L5 1744 aa19.55■□□□□ 0.72
MBD1-220ENST00000589758 KLHL34Q8N239 644 aa19.55■□□□□ 0.72
MBD1-220ENST00000589758 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
MBD1-220ENST00000589758 ASAP1Q9ULH1 1129 aa19.54■□□□□ 0.72
MBD1-220ENST00000589758 IL13P35225 146 aa19.52■□□□□ 0.72
MBD1-220ENST00000589758 ATP6V1AP38606 617 aa19.52■□□□□ 0.72
MBD1-220ENST00000589758 SULT6B1Q6IMI4 303 aa19.52■□□□□ 0.72
MBD1-220ENST00000589758 ZNF530Q6P9A1 599 aaPredicted RBP19.52■□□□□ 0.72
MBD1-220ENST00000589758 ATG3Q9NT62 314 aa19.52■□□□□ 0.72
MBD1-220ENST00000589758 PER1O15534 1290 aaPredicted RBP19.51■□□□□ 0.71
MBD1-220ENST00000589758 SSFA2P28290 1259 aa19.51■□□□□ 0.71
MBD1-220ENST00000589758 GPR162Q16538 588 aa19.51■□□□□ 0.71
MBD1-220ENST00000589758 C1orf141Q5JVX7 400 aa19.51■□□□□ 0.71
MBD1-220ENST00000589758 KDRP35968 1356 aa19.5■□□□□ 0.71
MBD1-220ENST00000589758 MSL1Q68DK7 614 aa19.5■□□□□ 0.71
MBD1-220ENST00000589758 AEBP1Q8IUX7 1158 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms