RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 MYOM1P52179 1685 aa16.92■□□□□ 0.3
VAT1-206ENST00000589709 KIF20BQ96Q89 1820 aa16.92■□□□□ 0.3
VAT1-206ENST00000589709 ZBTB7AO95365 584 aa16.92■□□□□ 0.3
VAT1-206ENST00000589709 PTGER2P43116 358 aa16.92■□□□□ 0.3
VAT1-206ENST00000589709 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
VAT1-206ENST00000589709 LRRC4BQ9NT99 713 aa16.92■□□□□ 0.3
VAT1-206ENST00000589709 TATP17735 454 aaPredicted RBP16.91■□□□□ 0.3
VAT1-206ENST00000589709 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
VAT1-206ENST00000589709 MTFR1LQ9H019 292 aa16.91■□□□□ 0.3
VAT1-206ENST00000589709 RGPD2P0DJD1 1756 aa16.9■□□□□ 0.3
VAT1-206ENST00000589709 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
VAT1-206ENST00000589709 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
VAT1-206ENST00000589709 EMILIN1Q9Y6C2 1016 aa16.9■□□□□ 0.3
VAT1-206ENST00000589709 PAPPAQ13219 1627 aa16.89■□□□□ 0.29
VAT1-206ENST00000589709 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
VAT1-206ENST00000589709 WASHC2AQ641Q2 1341 aa16.89■□□□□ 0.29
VAT1-206ENST00000589709 NSD2O96028 1365 aa16.89■□□□□ 0.29
VAT1-206ENST00000589709 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
VAT1-206ENST00000589709 ZNF827Q17R98 1081 aa16.88■□□□□ 0.29
VAT1-206ENST00000589709 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
VAT1-206ENST00000589709 SGIP1Q9BQI5 828 aa16.88■□□□□ 0.29
VAT1-206ENST00000589709 PCDH11XQ9BZA7 1347 aa16.87■□□□□ 0.29
VAT1-206ENST00000589709 PCDH11YQ9BZA8 1340 aa16.87■□□□□ 0.29
VAT1-206ENST00000589709 SHANK3Q9BYB0 1731 aa16.87■□□□□ 0.29
VAT1-206ENST00000589709 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
VAT1-206ENST00000589709 SLC16A10Q8TF71 515 aa16.86■□□□□ 0.29
VAT1-206ENST00000589709 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
VAT1-206ENST00000589709 POLKQ9UBT6 870 aa16.86■□□□□ 0.29
VAT1-206ENST00000589709 NCAPD2Q15021 1401 aa16.86■□□□□ 0.29
VAT1-206ENST00000589709 PPM1GO15355 546 aaPredicted RBP16.85■□□□□ 0.29
VAT1-206ENST00000589709 CYP27B1O15528 508 aa16.84■□□□□ 0.29
VAT1-206ENST00000589709 HMGB2P26583 209 aaKnown RBP16.84■□□□□ 0.29
VAT1-206ENST00000589709 DOT1LQ8TEK3 1739 aa16.83■□□□□ 0.28
VAT1-206ENST00000589709 PANK3Q9H999 370 aa16.83■□□□□ 0.28
VAT1-206ENST00000589709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.83■□□□□ 0.28
VAT1-206ENST00000589709 ANKRD26Q9UPS8 1709 aa16.82■□□□□ 0.28
VAT1-206ENST00000589709 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
VAT1-206ENST00000589709 EYA1Q99502 592 aa16.82■□□□□ 0.28
VAT1-206ENST00000589709 SYT17Q9BSW7 474 aa16.82■□□□□ 0.28
VAT1-206ENST00000589709 TFCP2L1Q9NZI6 479 aa16.82■□□□□ 0.28
VAT1-206ENST00000589709 CCNL1Q9UK58 526 aaPredicted RBP16.82■□□□□ 0.28
VAT1-206ENST00000589709 PNPLA7Q6ZV29 1317 aa16.81■□□□□ 0.28
VAT1-206ENST00000589709 KCNQ4P56696 695 aa16.81■□□□□ 0.28
VAT1-206ENST00000589709 ARXQ96QS3 562 aa16.81■□□□□ 0.28
VAT1-206ENST00000589709 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
VAT1-206ENST00000589709 SPG7Q9UQ90 795 aa16.81■□□□□ 0.28
VAT1-206ENST00000589709 LY75O60449 1722 aa16.81■□□□□ 0.28
VAT1-206ENST00000589709 MAP2P11137 1827 aaKnown RBP16.8■□□□□ 0.28
VAT1-206ENST00000589709 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
VAT1-206ENST00000589709 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
VAT1-206ENST00000589709 PLEKHG2Q9H7P9 1386 aa16.78■□□□□ 0.28
VAT1-206ENST00000589709 TNNT2P45379 298 aaPredicted RBP16.78■□□□□ 0.28
VAT1-206ENST00000589709 EIF4A2Q14240 407 aaKnown RBP16.78■□□□□ 0.28
VAT1-206ENST00000589709 MPRIPQ6WCQ1 1025 aa16.78■□□□□ 0.28
VAT1-206ENST00000589709 SMARCC1Q92922 1105 aaPredicted RBP16.78■□□□□ 0.28
VAT1-206ENST00000589709 PKD1L3Q7Z443 1732 aa16.77■□□□□ 0.28
VAT1-206ENST00000589709 YY1P25490 414 aa16.77■□□□□ 0.28
VAT1-206ENST00000589709 POLD1P28340 1107 aa16.76■□□□□ 0.27
VAT1-206ENST00000589709 PALLDQ8WX93 1383 aa16.76■□□□□ 0.27
VAT1-206ENST00000589709 IFNL2Q8IZJ0 200 aa16.75■□□□□ 0.27
VAT1-206ENST00000589709 PIGBQ92521 554 aa16.75■□□□□ 0.27
VAT1-206ENST00000589709 IGSF1Q8N6C5 1336 aa16.74■□□□□ 0.27
VAT1-206ENST00000589709 PHKG2P15735 406 aa16.74■□□□□ 0.27
VAT1-206ENST00000589709 MORC1Q86VD1 984 aa16.74■□□□□ 0.27
VAT1-206ENST00000589709 FLAD1Q8NFF5 587 aa16.74■□□□□ 0.27
VAT1-206ENST00000589709 KNSTRNQ9Y448 316 aa16.74■□□□□ 0.27
VAT1-206ENST00000589709 COL24A1Q17RW2 1714 aa16.73■□□□□ 0.27
VAT1-206ENST00000589709 COL23A1Q86Y22 540 aaPredicted RBP16.73■□□□□ 0.27
VAT1-206ENST00000589709 TOGARAM1Q9Y4F4 1720 aa16.71■□□□□ 0.27
VAT1-206ENST00000589709 TMOD3Q9NYL9 352 aa16.71■□□□□ 0.27
VAT1-206ENST00000589709 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
VAT1-206ENST00000589709 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
VAT1-206ENST00000589709 ITGB4P16144 1822 aa16.7■□□□□ 0.26
VAT1-206ENST00000589709 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
VAT1-206ENST00000589709 LOC102724428A0A0B4J2F2 783 aa16.69■□□□□ 0.26
VAT1-206ENST00000589709 MSH5O43196 834 aa16.69■□□□□ 0.26
VAT1-206ENST00000589709 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
VAT1-206ENST00000589709 SIK1P57059 783 aa16.69■□□□□ 0.26
VAT1-206ENST00000589709 AMOTQ4VCS5 1084 aa16.69■□□□□ 0.26
VAT1-206ENST00000589709 PLEKHO1Q53GL0 409 aaPredicted RBP16.69■□□□□ 0.26
VAT1-206ENST00000589709 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
VAT1-206ENST00000589709 ASAP1Q9ULH1 1129 aa16.68■□□□□ 0.26
VAT1-206ENST00000589709 C5P01031 1676 aa16.68■□□□□ 0.26
VAT1-206ENST00000589709 DCAF5Q96JK2 942 aa16.67■□□□□ 0.26
VAT1-206ENST00000589709 AK7Q96M32 723 aa16.67■□□□□ 0.26
VAT1-206ENST00000589709 TAF1LQ8IZX4 1826 aa16.66■□□□□ 0.26
VAT1-206ENST00000589709 PER1O15534 1290 aaPredicted RBP16.66■□□□□ 0.26
VAT1-206ENST00000589709 ATG3Q9NT62 314 aa16.66■□□□□ 0.26
VAT1-206ENST00000589709 IL13P35225 146 aa16.65■□□□□ 0.26
VAT1-206ENST00000589709 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
VAT1-206ENST00000589709 KDRP35968 1356 aa16.64■□□□□ 0.26
VAT1-206ENST00000589709 SSFA2P28290 1259 aa16.64■□□□□ 0.25
VAT1-206ENST00000589709 ATP6V1AP38606 617 aa16.64■□□□□ 0.25
VAT1-206ENST00000589709 ITPK1Q13572 414 aa16.64■□□□□ 0.25
VAT1-206ENST00000589709 GPR162Q16538 588 aa16.64■□□□□ 0.25
VAT1-206ENST00000589709 ZNF530Q6P9A1 599 aaPredicted RBP16.64■□□□□ 0.25
VAT1-206ENST00000589709 AEBP1Q8IUX7 1158 aa16.64■□□□□ 0.25
VAT1-206ENST00000589709 KLHL34Q8N239 644 aa16.64■□□□□ 0.25
VAT1-206ENST00000589709 LINC00116Q8NCU8 138 aa16.64■□□□□ 0.25
VAT1-206ENST00000589709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms