RNA–Protein interactions for RNA: ENST00000589695.1

TREM1-205, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-205ENST00000589695 ACSBG1Q96GR2 724 aa7□□□□□ -1.29
TREM1-205ENST00000589695 ANO8Q9HCE9 1232 aaPredicted RBP7□□□□□ -1.29
TREM1-205ENST00000589695 POLKQ9UBT6 870 aa7□□□□□ -1.29
TREM1-205ENST00000589695 EMILIN1Q9Y6C2 1016 aa7□□□□□ -1.29
TREM1-205ENST00000589695 NCAPD2Q15021 1401 aa7□□□□□ -1.29
TREM1-205ENST00000589695 FAM208AQ9UK61 1670 aaKnown RBP7□□□□□ -1.29
TREM1-205ENST00000589695 SLC15A2Q16348 729 aa6.99□□□□□ -1.29
TREM1-205ENST00000589695 PDGFDQ9GZP0 370 aaPredicted RBP6.99□□□□□ -1.29
TREM1-205ENST00000589695 LRRC4BQ9NT99 713 aa6.99□□□□□ -1.29
TREM1-205ENST00000589695 MEGF6O75095 1541 aa6.99□□□□□ -1.29
TREM1-205ENST00000589695 NSD2O96028 1365 aa6.98□□□□□ -1.29
TREM1-205ENST00000589695 NHSQ6T4R5 1651 aa6.98□□□□□ -1.29
TREM1-205ENST00000589695 PER1O15534 1290 aaPredicted RBP6.98□□□□□ -1.29
TREM1-205ENST00000589695 TATP17735 454 aaPredicted RBP6.98□□□□□ -1.29
TREM1-205ENST00000589695 PRIM1P49642 420 aaKnown RBP6.98□□□□□ -1.29
TREM1-205ENST00000589695 NKX1-1Q15270 411 aaPredicted RBP6.98□□□□□ -1.29
TREM1-205ENST00000589695 POTEHQ6S545 545 aa6.98□□□□□ -1.29
TREM1-205ENST00000589695 USHBP1Q8N6Y0 703 aa6.98□□□□□ -1.29
TREM1-205ENST00000589695 RAPGEF4Q8WZA2 1011 aa6.98□□□□□ -1.29
TREM1-205ENST00000589695 SPON1Q9HCB6 807 aa6.98□□□□□ -1.29
TREM1-205ENST00000589695 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.98□□□□□ -1.29
TREM1-205ENST00000589695 SMG6Q86US8 1419 aaKnown RBP6.98□□□□□ -1.29
TREM1-205ENST00000589695 CYP27B1O15528 508 aa6.97□□□□□ -1.29
TREM1-205ENST00000589695 PTGER2P43116 358 aa6.97□□□□□ -1.29
TREM1-205ENST00000589695 SLC27A3Q5K4L6 730 aa6.97□□□□□ -1.29
TREM1-205ENST00000589695 AKT1S1Q96B36 256 aa6.97□□□□□ -1.29
TREM1-205ENST00000589695 EYA1Q99502 592 aa6.97□□□□□ -1.29
TREM1-205ENST00000589695 STK32BQ9NY57 414 aa6.97□□□□□ -1.29
TREM1-205ENST00000589695 KIF7Q2M1P5 1343 aa6.97□□□□□ -1.29
TREM1-205ENST00000589695 KIF20BQ96Q89 1820 aa6.97□□□□□ -1.29
TREM1-205ENST00000589695 PLEKHG2Q9H7P9 1386 aa6.96□□□□□ -1.29
TREM1-205ENST00000589695 PPM1GO15355 546 aaPredicted RBP6.96□□□□□ -1.3
TREM1-205ENST00000589695 EIF4A2Q14240 407 aaKnown RBP6.96□□□□□ -1.3
TREM1-205ENST00000589695 AMER1Q5JTC6 1135 aaPredicted RBP6.96□□□□□ -1.3
TREM1-205ENST00000589695 SGIP1Q9BQI5 828 aa6.96□□□□□ -1.3
TREM1-205ENST00000589695 SHANK3Q9BYB0 1731 aa6.96□□□□□ -1.3
TREM1-205ENST00000589695 ANKRD26Q9UPS8 1709 aa6.96□□□□□ -1.3
TREM1-205ENST00000589695 RGPD2P0DJD1 1756 aa6.95□□□□□ -1.3
TREM1-205ENST00000589695 PAPPAQ13219 1627 aa6.95□□□□□ -1.3
TREM1-205ENST00000589695 POLR3GLQ9BT43 218 aa6.95□□□□□ -1.3
TREM1-205ENST00000589695 SPG7Q9UQ90 795 aa6.95□□□□□ -1.3
TREM1-205ENST00000589695 IGSF1Q8N6C5 1336 aa6.95□□□□□ -1.3
TREM1-205ENST00000589695 PCDH11XQ9BZA7 1347 aa6.95□□□□□ -1.3
TREM1-205ENST00000589695 PCDH11YQ9BZA8 1340 aa6.95□□□□□ -1.3
TREM1-205ENST00000589695 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
TREM1-205ENST00000589695 BTAF1O14981 1849 aa6.94□□□□□ -1.3
TREM1-205ENST00000589695 TNNT2P45379 298 aaPredicted RBP6.94□□□□□ -1.3
TREM1-205ENST00000589695 ZNF827Q17R98 1081 aa6.94□□□□□ -1.3
TREM1-205ENST00000589695 MORC1Q86VD1 984 aa6.94□□□□□ -1.3
TREM1-205ENST00000589695 SLC16A10Q8TF71 515 aa6.94□□□□□ -1.3
TREM1-205ENST00000589695 SYTL4Q96C24 671 aaPredicted RBP6.94□□□□□ -1.3
TREM1-205ENST00000589695 MTFR1LQ9H019 292 aa6.94□□□□□ -1.3
TREM1-205ENST00000589695 KNSTRNQ9Y448 316 aa6.94□□□□□ -1.3
TREM1-205ENST00000589695 ZBTB7AO95365 584 aa6.93□□□□□ -1.3
TREM1-205ENST00000589695 PHKG2P15735 406 aa6.93□□□□□ -1.3
TREM1-205ENST00000589695 HMGB2P26583 209 aaKnown RBP6.93□□□□□ -1.3
TREM1-205ENST00000589695 IL13P35225 146 aa6.93□□□□□ -1.3
TREM1-205ENST00000589695 KCNQ4P56696 695 aa6.93□□□□□ -1.3
TREM1-205ENST00000589695 IFNL2Q8IZJ0 200 aa6.93□□□□□ -1.3
TREM1-205ENST00000589695 PIGBQ92521 554 aa6.93□□□□□ -1.3
TREM1-205ENST00000589695 PNPLA7Q6ZV29 1317 aa6.93□□□□□ -1.3
TREM1-205ENST00000589695 MAP2P11137 1827 aaKnown RBP6.92□□□□□ -1.3
TREM1-205ENST00000589695 MPRIPQ6WCQ1 1025 aa6.92□□□□□ -1.3
TREM1-205ENST00000589695 CCNL1Q9UK58 526 aaPredicted RBP6.92□□□□□ -1.3
TREM1-205ENST00000589695 ATF5Q9Y2D1 282 aaPredicted RBP6.92□□□□□ -1.3
TREM1-205ENST00000589695 KDRP35968 1356 aa6.92□□□□□ -1.3
TREM1-205ENST00000589695 NPC1L1Q9UHC9 1359 aa6.92□□□□□ -1.3
TREM1-205ENST00000589695 LY75O60449 1722 aa6.91□□□□□ -1.3
TREM1-205ENST00000589695 PKD1L3Q7Z443 1732 aa6.91□□□□□ -1.3
TREM1-205ENST00000589695 ERVV-2B6SEH9 535 aa6.91□□□□□ -1.3
TREM1-205ENST00000589695 AMOTQ4VCS5 1084 aa6.91□□□□□ -1.3
TREM1-205ENST00000589695 PLEKHO1Q53GL0 409 aaPredicted RBP6.91□□□□□ -1.3
TREM1-205ENST00000589695 SMARCC1Q92922 1105 aaPredicted RBP6.91□□□□□ -1.3
TREM1-205ENST00000589695 SYT17Q9BSW7 474 aa6.91□□□□□ -1.3
TREM1-205ENST00000589695 ATG3Q9NT62 314 aa6.91□□□□□ -1.3
TREM1-205ENST00000589695 DOT1LQ8TEK3 1739 aa6.9□□□□□ -1.3
TREM1-205ENST00000589695 MTHFSP49914 203 aa6.9□□□□□ -1.3
TREM1-205ENST00000589695 COL23A1Q86Y22 540 aaPredicted RBP6.9□□□□□ -1.3
TREM1-205ENST00000589695 AEBP1Q8IUX7 1158 aa6.9□□□□□ -1.3
TREM1-205ENST00000589695 DCAF5Q96JK2 942 aa6.9□□□□□ -1.3
TREM1-205ENST00000589695 ARXQ96QS3 562 aa6.9□□□□□ -1.3
TREM1-205ENST00000589695 TFCP2L1Q9NZI6 479 aa6.9□□□□□ -1.3
TREM1-205ENST00000589695 PPP1R1BQ9UD71 204 aaPredicted RBP6.9□□□□□ -1.3
TREM1-205ENST00000589695 ASAP1Q9ULH1 1129 aa6.9□□□□□ -1.3
TREM1-205ENST00000589695 PALLDQ8WX93 1383 aa6.9□□□□□ -1.31
TREM1-205ENST00000589695 MAP3K5Q99683 1374 aa6.9□□□□□ -1.31
TREM1-205ENST00000589695 LOC102724428A0A0B4J2F2 783 aa6.89□□□□□ -1.31
TREM1-205ENST00000589695 HSP90AB1P08238 724 aaKnown RBP6.89□□□□□ -1.31
TREM1-205ENST00000589695 SIK1P57059 783 aa6.89□□□□□ -1.31
TREM1-205ENST00000589695 SULT6B1Q6IMI4 303 aa6.89□□□□□ -1.31
TREM1-205ENST00000589695 FLAD1Q8NFF5 587 aa6.89□□□□□ -1.31
TREM1-205ENST00000589695 FHDC1Q9C0D6 1143 aaPredicted RBP6.89□□□□□ -1.31
TREM1-205ENST00000589695 TMOD3Q9NYL9 352 aa6.89□□□□□ -1.31
TREM1-205ENST00000589695 COL24A1Q17RW2 1714 aa6.89□□□□□ -1.31
TREM1-205ENST00000589695 QSER1Q2KHR3 1735 aa6.89□□□□□ -1.31
TREM1-205ENST00000589695 TOGARAM1Q9Y4F4 1720 aa6.89□□□□□ -1.31
TREM1-205ENST00000589695 ITPK1Q13572 414 aa6.88□□□□□ -1.31
TREM1-205ENST00000589695 AMIGO3Q86WK7 504 aa6.88□□□□□ -1.31
TREM1-205ENST00000589695 CNKSR2Q8WXI2 1034 aa6.88□□□□□ -1.31
TREM1-205ENST00000589695 SLC4A9Q96Q91 983 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms