RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 CCDC27Q2M243 656 aa23.19■■□□□ 1.3
TMED1-205ENST00000589638 ZNF521Q96K83 1311 aa23.18■■□□□ 1.3
TMED1-205ENST00000589638 CENPBP07199 599 aaPredicted RBP23.18■■□□□ 1.3
TMED1-205ENST00000589638 AMOTQ4VCS5 1084 aa23.18■■□□□ 1.3
TMED1-205ENST00000589638 NCBP3Q53F19 620 aaKnown RBP23.18■■□□□ 1.3
TMED1-205ENST00000589638 ZNF530Q6P9A1 599 aaPredicted RBP23.18■■□□□ 1.3
TMED1-205ENST00000589638 SPATA31A1Q5TZJ5 1347 aa23.17■■□□□ 1.3
TMED1-205ENST00000589638 LMOD3Q0VAK6 560 aa23.17■■□□□ 1.3
TMED1-205ENST00000589638 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
TMED1-205ENST00000589638 SPATA31A5Q5VU36 1347 aa23.16■■□□□ 1.3
TMED1-205ENST00000589638 SPATA31A7Q8IWB4 1347 aa23.16■■□□□ 1.3
TMED1-205ENST00000589638 OVOS2A0A0G2JMS6 1433 aa23.16■■□□□ 1.3
TMED1-205ENST00000589638 DCTN1Q14203 1278 aa23.15■■□□□ 1.3
TMED1-205ENST00000589638 VPS72Q15906 364 aa23.15■■□□□ 1.3
TMED1-205ENST00000589638 CDCA7LQ96GN5 454 aa23.15■■□□□ 1.3
TMED1-205ENST00000589638 THUMPD2Q9BTF0 503 aaKnown RBP23.15■■□□□ 1.3
TMED1-205ENST00000589638 SPG7Q9UQ90 795 aa23.15■■□□□ 1.3
TMED1-205ENST00000589638 GOLGA2Q08379 1002 aa23.14■■□□□ 1.29
TMED1-205ENST00000589638 MAP3K5Q99683 1374 aa23.14■■□□□ 1.29
TMED1-205ENST00000589638 GNAT3A8MTJ3 354 aa23.13■■□□□ 1.29
TMED1-205ENST00000589638 PDE3BQ13370 1112 aa23.13■■□□□ 1.29
TMED1-205ENST00000589638 C1orf141Q5JVX7 400 aa23.13■■□□□ 1.29
TMED1-205ENST00000589638 MCM10Q7L590 875 aa23.13■■□□□ 1.29
TMED1-205ENST00000589638 RTF1Q92541 710 aaKnown RBP23.13■■□□□ 1.29
TMED1-205ENST00000589638 AKAP4Q5JQC9 854 aa23.12■■□□□ 1.29
TMED1-205ENST00000589638 WDR63Q8IWG1 891 aa23.12■■□□□ 1.29
TMED1-205ENST00000589638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.12■■□□□ 1.29
TMED1-205ENST00000589638 DISP2A7MBM2 1401 aa23.11■■□□□ 1.29
TMED1-205ENST00000589638 ZCRB1Q8TBF4 217 aaKnown RBP23.11■■□□□ 1.29
TMED1-205ENST00000589638 THRAP3Q9Y2W1 955 aaKnown RBP23.11■■□□□ 1.29
TMED1-205ENST00000589638 SPINK5Q9NQ38 1064 aaPredicted RBP23.1■■□□□ 1.29
TMED1-205ENST00000589638 PLEKHG2Q9H7P9 1386 aa23.1■■□□□ 1.29
TMED1-205ENST00000589638 PARP4Q9UKK3 1724 aaKnown RBP23.1■■□□□ 1.29
TMED1-205ENST00000589638 HTATSF1O43719 755 aaKnown RBP23.08■■□□□ 1.29
TMED1-205ENST00000589638 PHKG2P15735 406 aa23.08■■□□□ 1.29
TMED1-205ENST00000589638 SLFN5Q08AF3 891 aa23.08■■□□□ 1.29
TMED1-205ENST00000589638 IFNL2Q8IZJ0 200 aa23.08■■□□□ 1.29
TMED1-205ENST00000589638 TRPC5Q9UL62 973 aaPredicted RBP23.08■■□□□ 1.29
TMED1-205ENST00000589638 LAS1LQ9Y4W2 734 aaKnown RBP23.08■■□□□ 1.29
TMED1-205ENST00000589638 E9PSI1 815 aa23.07■■□□□ 1.28
TMED1-205ENST00000589638 CYP27B1O15528 508 aa23.07■■□□□ 1.28
TMED1-205ENST00000589638 CALD1Q05682 793 aaKnown RBP23.07■■□□□ 1.28
TMED1-205ENST00000589638 FAM98CQ17RN3 349 aaKnown RBP23.07■■□□□ 1.28
TMED1-205ENST00000589638 MPRIPQ6WCQ1 1025 aa23.07■■□□□ 1.28
TMED1-205ENST00000589638 DLG5Q8TDM6 1919 aa23.07■■□□□ 1.28
TMED1-205ENST00000589638 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.07■■□□□ 1.28
TMED1-205ENST00000589638 PCDH11XQ9BZA7 1347 aa23.07■■□□□ 1.28
TMED1-205ENST00000589638 PCDH11YQ9BZA8 1340 aa23.07■■□□□ 1.28
TMED1-205ENST00000589638 BARGINQ6ZT62 677 aa23.06■■□□□ 1.28
TMED1-205ENST00000589638 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
TMED1-205ENST00000589638 DDX54Q8TDD1 881 aaKnown RBP23.06■■□□□ 1.28
TMED1-205ENST00000589638 CDCA7Q9BWT1 371 aaPredicted RBP23.06■■□□□ 1.28
TMED1-205ENST00000589638 ATRNO75882 1429 aa23.06■■□□□ 1.28
TMED1-205ENST00000589638 PKD1L3Q7Z443 1732 aa23.05■■□□□ 1.28
TMED1-205ENST00000589638 LGR6Q9HBX8 967 aa23.05■■□□□ 1.28
TMED1-205ENST00000589638 IL16Q14005 1332 aa23.05■■□□□ 1.28
TMED1-205ENST00000589638 A0A0G2JS52 829 aa23.04■■□□□ 1.28
TMED1-205ENST00000589638 EXOC5O00471 708 aa23.04■■□□□ 1.28
TMED1-205ENST00000589638 MYT1Q01538 1121 aa23.04■■□□□ 1.28
TMED1-205ENST00000589638 GJD4Q96KN9 370 aaPredicted RBP23.04■■□□□ 1.28
TMED1-205ENST00000589638 QTRT2Q9H974 415 aaKnown RBP23.04■■□□□ 1.28
TMED1-205ENST00000589638 RNMTO43148 476 aaKnown RBP23.03■■□□□ 1.28
TMED1-205ENST00000589638 DDB1Q16531 1140 aa23.02■■□□□ 1.28
TMED1-205ENST00000589638 DUSP27Q5VZP5 1158 aa23.02■■□□□ 1.28
TMED1-205ENST00000589638 TSR2Q969E8 191 aaKnown RBP23.02■■□□□ 1.28
TMED1-205ENST00000589638 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
TMED1-205ENST00000589638 WNK3Q9BYP7 1800 aa23.01■■□□□ 1.27
TMED1-205ENST00000589638 TNS2Q63HR2 1409 aa23.01■■□□□ 1.27
TMED1-205ENST00000589638 HSP90AB1P08238 724 aaKnown RBP23.01■■□□□ 1.27
TMED1-205ENST00000589638 IFT57Q9NWB7 429 aa23.01■■□□□ 1.27
TMED1-205ENST00000589638 GNAI1P63096 354 aa23■■□□□ 1.27
TMED1-205ENST00000589638 ZNF772Q68DY9 489 aaPredicted RBP23■■□□□ 1.27
TMED1-205ENST00000589638 TRMT2AQ8IZ69 625 aaKnown RBP23■■□□□ 1.27
TMED1-205ENST00000589638 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
TMED1-205ENST00000589638 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
TMED1-205ENST00000589638 GLI3P10071 1580 aa22.99■■□□□ 1.27
TMED1-205ENST00000589638 CEMIPQ8WUJ3 1361 aa22.99■■□□□ 1.27
TMED1-205ENST00000589638 ZNF853P0CG23 659 aa22.98■■□□□ 1.27
TMED1-205ENST00000589638 TEFQ10587 303 aa22.98■■□□□ 1.27
TMED1-205ENST00000589638 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
TMED1-205ENST00000589638 CFAP44Q96MT7 982 aa22.98■■□□□ 1.27
TMED1-205ENST00000589638 MBIPQ9NS73 344 aa22.97■■□□□ 1.27
TMED1-205ENST00000589638 MIS18AQ9NYP9 233 aa22.97■■□□□ 1.27
TMED1-205ENST00000589638 SHANK3Q9BYB0 1731 aa22.96■■□□□ 1.27
TMED1-205ENST00000589638 TSPYL4Q9UJ04 414 aa22.96■■□□□ 1.27
TMED1-205ENST00000589638 LRRC37A3O60309 1634 aa22.96■■□□□ 1.27
TMED1-205ENST00000589638 NKX1-1Q15270 411 aaPredicted RBP22.95■■□□□ 1.26
TMED1-205ENST00000589638 TAF7Q15545 349 aaPredicted RBP22.95■■□□□ 1.26
TMED1-205ENST00000589638 ILDR1Q86SU0 546 aaPredicted RBP22.95■■□□□ 1.26
TMED1-205ENST00000589638 CHL1O00533 1208 aa22.94■■□□□ 1.26
TMED1-205ENST00000589638 CABP4P57796 275 aa22.92■■□□□ 1.26
TMED1-205ENST00000589638 EXOSC9Q06265 439 aaKnown RBP22.92■■□□□ 1.26
TMED1-205ENST00000589638 MARCH10Q8NA82 808 aaPredicted RBP22.92■■□□□ 1.26
TMED1-205ENST00000589638 SLC52A2Q9HAB3 445 aa22.92■■□□□ 1.26
TMED1-205ENST00000589638 BTBD11A6QL63 1104 aa22.91■■□□□ 1.26
TMED1-205ENST00000589638 SEPT12Q8IYM1 358 aa22.91■■□□□ 1.26
TMED1-205ENST00000589638 ADAMTS7Q9UKP4 1686 aa22.9■■□□□ 1.26
TMED1-205ENST00000589638 THSD7AQ9UPZ6 1657 aa22.9■■□□□ 1.26
TMED1-205ENST00000589638 RBM6P78332 1123 aaKnown RBP22.9■■□□□ 1.26
TMED1-205ENST00000589638 NFATC2IPQ8NCF5 419 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms