RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RBM46Q8TBY0 533 aaKnown RBP9.05□□□□□ -0.96
VPS25-204ENST00000589577 PCDH10Q9P2E7 1040 aa9.05□□□□□ -0.96
VPS25-204ENST00000589577 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
VPS25-204ENST00000589577 HSPA1AP0DMV8 641 aaKnown RBP9.04□□□□□ -0.96
VPS25-204ENST00000589577 HSPA1BP0DMV9 641 aaKnown RBP9.04□□□□□ -0.96
VPS25-204ENST00000589577 ERBB3P21860 1342 aa9.04□□□□□ -0.96
VPS25-204ENST00000589577 KIAA1210Q9ULL0 1709 aa9.03□□□□□ -0.96
VPS25-204ENST00000589577 ANKRD36BQ8N2N9 1353 aa9.03□□□□□ -0.96
VPS25-204ENST00000589577 SOX12O15370 315 aa9.03□□□□□ -0.96
VPS25-204ENST00000589577 MSH5O43196 834 aa9.03□□□□□ -0.96
VPS25-204ENST00000589577 IL2RBP14784 551 aa9.03□□□□□ -0.96
VPS25-204ENST00000589577 FAM208AQ9UK61 1670 aaKnown RBP9.03□□□□□ -0.96
VPS25-204ENST00000589577 C4BP0C0L5 1744 aa9.02□□□□□ -0.96
VPS25-204ENST00000589577 PXDNLA1KZ92 1463 aa9.02□□□□□ -0.96
VPS25-204ENST00000589577 AMIGO3Q86WK7 504 aa9.02□□□□□ -0.97
VPS25-204ENST00000589577 CABP2Q9NPB3 220 aa9.02□□□□□ -0.97
VPS25-204ENST00000589577 MON2Q7Z3U7 1717 aa9.02□□□□□ -0.97
VPS25-204ENST00000589577 RGPD2P0DJD1 1756 aa9.01□□□□□ -0.97
VPS25-204ENST00000589577 ARFGEF1Q9Y6D6 1849 aa9.01□□□□□ -0.97
VPS25-204ENST00000589577 PRIM1P49642 420 aaKnown RBP9.01□□□□□ -0.97
VPS25-204ENST00000589577 FSTL1Q12841 308 aa9.01□□□□□ -0.97
VPS25-204ENST00000589577 C10orf71Q711Q0 1435 aa9.01□□□□□ -0.97
VPS25-204ENST00000589577 KCNH5Q8NCM2 988 aa9.01□□□□□ -0.97
VPS25-204ENST00000589577 DCAF11Q8TEB1 546 aa9.01□□□□□ -0.97
VPS25-204ENST00000589577 CABP1Q9NZU7 370 aa9.01□□□□□ -0.97
VPS25-204ENST00000589577 CCNL1Q9UK58 526 aaPredicted RBP9.01□□□□□ -0.97
VPS25-204ENST00000589577 KDM2AQ9Y2K7 1162 aa9.01□□□□□ -0.97
VPS25-204ENST00000589577 KCPQ6ZWJ8 1503 aa9□□□□□ -0.97
VPS25-204ENST00000589577 SRPK2P78362 688 aaKnown RBP9□□□□□ -0.97
VPS25-204ENST00000589577 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
VPS25-204ENST00000589577 SBF1O95248 1867 aa9□□□□□ -0.97
VPS25-204ENST00000589577 TNRC18O15417 2968 aaPredicted RBP9□□□□□ -0.97
VPS25-204ENST00000589577 SYTL4Q96C24 671 aaPredicted RBP8.99□□□□□ -0.97
VPS25-204ENST00000589577 TTC21BQ7Z4L5 1316 aa8.99□□□□□ -0.97
VPS25-204ENST00000589577 SMIM5Q71RC9 77 aa8.98□□□□□ -0.97
VPS25-204ENST00000589577 DDX54Q8TDD1 881 aaKnown RBP8.98□□□□□ -0.97
VPS25-204ENST00000589577 MAP2P11137 1827 aaKnown RBP8.98□□□□□ -0.97
VPS25-204ENST00000589577 ITGB4P16144 1822 aa8.97□□□□□ -0.97
VPS25-204ENST00000589577 FAM161AQ3B820 660 aa8.97□□□□□ -0.97
VPS25-204ENST00000589577 MEGF6O75095 1541 aa8.96□□□□□ -0.97
VPS25-204ENST00000589577 C16orf71Q8IYS4 520 aaPredicted RBP8.96□□□□□ -0.98
VPS25-204ENST00000589577 ANKRD24Q8TF21 1146 aa8.96□□□□□ -0.98
VPS25-204ENST00000589577 USP47Q96K76 1375 aa8.96□□□□□ -0.98
VPS25-204ENST00000589577 PLEKHG2Q9H7P9 1386 aa8.96□□□□□ -0.98
VPS25-204ENST00000589577 FLAD1Q8NFF5 587 aa8.95□□□□□ -0.98
VPS25-204ENST00000589577 TTC21AQ8NDW8 1320 aa8.95□□□□□ -0.98
VPS25-204ENST00000589577 NBPF1Q3BBV0 1214 aa8.94□□□□□ -0.98
VPS25-204ENST00000589577 C9orf131Q5VYM1 1079 aa8.94□□□□□ -0.98
VPS25-204ENST00000589577 SMC1BQ8NDV3 1235 aa8.94□□□□□ -0.98
VPS25-204ENST00000589577 STAC3Q96MF2 364 aa8.94□□□□□ -0.98
VPS25-204ENST00000589577 RRAGCQ9HB90 399 aa8.94□□□□□ -0.98
VPS25-204ENST00000589577 BCS1LQ9Y276 419 aa8.94□□□□□ -0.98
VPS25-204ENST00000589577 CENPJQ9HC77 1338 aaPredicted RBP8.94□□□□□ -0.98
VPS25-204ENST00000589577 USP31Q70CQ4 1352 aa8.94□□□□□ -0.98
VPS25-204ENST00000589577 PHF14O94880 888 aa8.93□□□□□ -0.98
VPS25-204ENST00000589577 ARHGAP27Q6ZUM4 889 aa8.93□□□□□ -0.98
VPS25-204ENST00000589577 PALLDQ8WX93 1383 aa8.93□□□□□ -0.98
VPS25-204ENST00000589577 C4AP0C0L4 1744 aa8.93□□□□□ -0.98
VPS25-204ENST00000589577 TIAM2Q8IVF5 1701 aa8.93□□□□□ -0.98
VPS25-204ENST00000589577 VIRMAQ69YN4 1812 aaKnown RBP8.92□□□□□ -0.98
VPS25-204ENST00000589577 KDM2BQ8NHM5 1336 aa8.92□□□□□ -0.98
VPS25-204ENST00000589577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.92□□□□□ -0.98
VPS25-204ENST00000589577 A0A0G2JLW4 131 aa8.92□□□□□ -0.98
VPS25-204ENST00000589577 FOXN1O15353 648 aa8.92□□□□□ -0.98
VPS25-204ENST00000589577 CD163L1Q9NR16 1453 aa8.91□□□□□ -0.98
VPS25-204ENST00000589577 KTN1Q86UP2 1357 aaKnown RBP8.91□□□□□ -0.98
VPS25-204ENST00000589577 ZNF692Q9BU19 519 aaPredicted RBP8.91□□□□□ -0.98
VPS25-204ENST00000589577 NSD3Q9BZ95 1437 aa8.9□□□□□ -0.98
VPS25-204ENST00000589577 SBNO2Q9Y2G9 1366 aa8.9□□□□□ -0.98
VPS25-204ENST00000589577 CCDC88AQ3V6T2 1871 aa8.9□□□□□ -0.98
VPS25-204ENST00000589577 MMP10P09238 476 aa8.9□□□□□ -0.98
VPS25-204ENST00000589577 KCNA3P22001 575 aa8.9□□□□□ -0.98
VPS25-204ENST00000589577 TGFB2P61812 414 aa8.9□□□□□ -0.98
VPS25-204ENST00000589577 NME9Q86XW9 330 aa8.9□□□□□ -0.98
VPS25-204ENST00000589577 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
VPS25-204ENST00000589577 AK7Q96M32 723 aa8.9□□□□□ -0.98
VPS25-204ENST00000589577 PRDM10Q9NQV6 1147 aa8.9□□□□□ -0.98
VPS25-204ENST00000589577 DPEP1P16444 411 aa8.89□□□□□ -0.99
VPS25-204ENST00000589577 SSFA2P28290 1259 aa8.89□□□□□ -0.99
VPS25-204ENST00000589577 RNF181Q9P0P0 153 aa8.89□□□□□ -0.99
VPS25-204ENST00000589577 KDM6AO15550 1401 aaPredicted RBP8.88□□□□□ -0.99
VPS25-204ENST00000589577 FCHSD2O94868 740 aa8.88□□□□□ -0.99
VPS25-204ENST00000589577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.88□□□□□ -0.99
VPS25-204ENST00000589577 LINC00116Q8NCU8 138 aa8.88□□□□□ -0.99
VPS25-204ENST00000589577 ABHD8Q96I13 439 aa8.88□□□□□ -0.99
VPS25-204ENST00000589577 DCAF5Q96JK2 942 aa8.88□□□□□ -0.99
VPS25-204ENST00000589577 COL5A3P25940 1745 aaPredicted RBP8.88□□□□□ -0.99
VPS25-204ENST00000589577 IP6K1Q92551 441 aa8.87□□□□□ -0.99
VPS25-204ENST00000589577 LTV1Q96GA3 475 aaPredicted RBP8.87□□□□□ -0.99
VPS25-204ENST00000589577 MKRN1Q9UHC7 482 aaKnown RBP8.87□□□□□ -0.99
VPS25-204ENST00000589577 PDE4DIPQ5VU43 2346 aa8.87□□□□□ -0.99
VPS25-204ENST00000589577 EVC2Q86UK5 1308 aa8.86□□□□□ -0.99
VPS25-204ENST00000589577 RGS19P49795 217 aa8.86□□□□□ -0.99
VPS25-204ENST00000589577 DLEC1Q9Y238 1755 aa8.86□□□□□ -0.99
VPS25-204ENST00000589577 POTECB2RU33 542 aa8.85□□□□□ -0.99
VPS25-204ENST00000589577 MLLT1Q03111 559 aaPredicted RBP8.85□□□□□ -0.99
VPS25-204ENST00000589577 MPRIPQ6WCQ1 1025 aa8.85□□□□□ -0.99
VPS25-204ENST00000589577 CNTNAP1P78357 1384 aa8.85□□□□□ -0.99
VPS25-204ENST00000589577 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
VPS25-204ENST00000589577 GNPATO15228 680 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms