RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 ZBTB7AO95365 584 aa33.16■■■□□ 2.9
LSM7-205ENST00000589532 NBPF6Q5VWK0 638 aa33.16■■■□□ 2.9
LSM7-205ENST00000589532 DDX54Q8TDD1 881 aaKnown RBP33.16■■■□□ 2.9
LSM7-205ENST00000589532 NBPF4Q96M43 638 aa33.16■■■□□ 2.9
LSM7-205ENST00000589532 LRRC4BQ9NT99 713 aa33.16■■■□□ 2.9
LSM7-205ENST00000589532 FLT4P35916 1363 aa33.16■■■□□ 2.9
LSM7-205ENST00000589532 KAT6BQ8WYB5 2073 aa33.16■■■□□ 2.9
LSM7-205ENST00000589532 SMG6Q86US8 1419 aaKnown RBP33.15■■■□□ 2.9
LSM7-205ENST00000589532 ZNF827Q17R98 1081 aa33.13■■■□□ 2.89
LSM7-205ENST00000589532 TUBGCP6Q96RT7 1819 aa33.13■■■□□ 2.89
LSM7-205ENST00000589532 NCAPD2Q15021 1401 aa33.12■■■□□ 2.89
LSM7-205ENST00000589532 SGIP1Q9BQI5 828 aa33.12■■■□□ 2.89
LSM7-205ENST00000589532 ZCRB1Q8TBF4 217 aaKnown RBP33.11■■■□□ 2.89
LSM7-205ENST00000589532 UTRNP46939 3433 aa33.1■■■□□ 2.89
LSM7-205ENST00000589532 HSP90AB2PQ58FF8 381 aa33.1■■■□□ 2.89
LSM7-205ENST00000589532 USHBP1Q8N6Y0 703 aa33.1■■■□□ 2.89
LSM7-205ENST00000589532 COL24A1Q17RW2 1714 aa33.1■■■□□ 2.89
LSM7-205ENST00000589532 PKD1L3Q7Z443 1732 aa33.1■■■□□ 2.89
LSM7-205ENST00000589532 CGNL1Q0VF96 1302 aa33.09■■■□□ 2.89
LSM7-205ENST00000589532 MTFR1LQ9H019 292 aa33.09■■■□□ 2.89
LSM7-205ENST00000589532 TOGARAM1Q9Y4F4 1720 aa33.06■■■□□ 2.88
LSM7-205ENST00000589532 SLC27A3Q5K4L6 730 aa33.06■■■□□ 2.88
LSM7-205ENST00000589532 AKT1S1Q96B36 256 aa33.06■■■□□ 2.88
LSM7-205ENST00000589532 ATF5Q9Y2D1 282 aaPredicted RBP33.06■■■□□ 2.88
LSM7-205ENST00000589532 PRIM1P49642 420 aaKnown RBP33.05■■■□□ 2.88
LSM7-205ENST00000589532 EMILIN1Q9Y6C2 1016 aa33.04■■■□□ 2.88
LSM7-205ENST00000589532 RAPGEF4Q8WZA2 1011 aa33■■■□□ 2.87
LSM7-205ENST00000589532 SYTL4Q96C24 671 aaPredicted RBP33■■■□□ 2.87
LSM7-205ENST00000589532 MAP2P11137 1827 aaKnown RBP33■■■□□ 2.87
LSM7-205ENST00000589532 PCDH11XQ9BZA7 1347 aa32.98■■■□□ 2.87
LSM7-205ENST00000589532 PCDH11YQ9BZA8 1340 aa32.98■■■□□ 2.87
LSM7-205ENST00000589532 TATP17735 454 aaPredicted RBP32.97■■■□□ 2.87
LSM7-205ENST00000589532 PNPLA7Q6ZV29 1317 aa32.97■■■□□ 2.87
LSM7-205ENST00000589532 MAP3K5Q99683 1374 aa32.96■■■□□ 2.87
LSM7-205ENST00000589532 C5P01031 1676 aa32.95■■■□□ 2.87
LSM7-205ENST00000589532 KCNQ4P56696 695 aa32.95■■■□□ 2.87
LSM7-205ENST00000589532 FHDC1Q9C0D6 1143 aaPredicted RBP32.95■■■□□ 2.87
LSM7-205ENST00000589532 ITGB4P16144 1822 aa32.94■■■□□ 2.86
LSM7-205ENST00000589532 WASHC2AQ641Q2 1341 aa32.94■■■□□ 2.86
LSM7-205ENST00000589532 CYP27B1O15528 508 aa32.93■■■□□ 2.86
LSM7-205ENST00000589532 SYT17Q9BSW7 474 aa32.92■■■□□ 2.86
LSM7-205ENST00000589532 TAF1LQ8IZX4 1826 aa32.92■■■□□ 2.86
LSM7-205ENST00000589532 YY1P25490 414 aa32.89■■■□□ 2.86
LSM7-205ENST00000589532 SLC16A10Q8TF71 515 aa32.89■■■□□ 2.86
LSM7-205ENST00000589532 ARXQ96QS3 562 aa32.89■■■□□ 2.86
LSM7-205ENST00000589532 POLKQ9UBT6 870 aa32.89■■■□□ 2.86
LSM7-205ENST00000589532 CCNL1Q9UK58 526 aaPredicted RBP32.89■■■□□ 2.86
LSM7-205ENST00000589532 HSPA5P11021 654 aaKnown RBP32.88■■■□□ 2.85
LSM7-205ENST00000589532 EIF4G2P78344 907 aaKnown RBP eCLIP32.87■■■□□ 2.85
LSM7-205ENST00000589532 GOLGB1Q14789 3259 aaKnown RBP32.87■■■□□ 2.85
LSM7-205ENST00000589532 PALLDQ8WX93 1383 aa32.84■■■□□ 2.85
LSM7-205ENST00000589532 EYA1Q99502 592 aa32.84■■■□□ 2.85
LSM7-205ENST00000589532 TFCP2L1Q9NZI6 479 aa32.84■■■□□ 2.85
LSM7-205ENST00000589532 DCAF8L1A6NGE4 600 aa32.83■■■□□ 2.85
LSM7-205ENST00000589532 PPM1GO15355 546 aaPredicted RBP32.83■■■□□ 2.85
LSM7-205ENST00000589532 PLEKHG2Q9H7P9 1386 aa32.83■■■□□ 2.85
LSM7-205ENST00000589532 NKX1-1Q15270 411 aaPredicted RBP32.82■■■□□ 2.84
LSM7-205ENST00000589532 C4BP0C0L5 1744 aa32.8■■■□□ 2.84
LSM7-205ENST00000589532 POLR3GLQ9BT43 218 aa32.8■■■□□ 2.84
LSM7-205ENST00000589532 EIF4A2Q14240 407 aaKnown RBP32.78■■■□□ 2.84
LSM7-205ENST00000589532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.78■■■□□ 2.84
LSM7-205ENST00000589532 MPRIPQ6WCQ1 1025 aa32.76■■■□□ 2.83
LSM7-205ENST00000589532 PANK3Q9H999 370 aa32.76■■■□□ 2.83
LSM7-205ENST00000589532 UBR3Q6ZT12 1888 aa32.75■■■□□ 2.83
LSM7-205ENST00000589532 IGSF1Q8N6C5 1336 aa32.75■■■□□ 2.83
LSM7-205ENST00000589532 COL23A1Q86Y22 540 aaPredicted RBP32.74■■■□□ 2.83
LSM7-205ENST00000589532 SPG7Q9UQ90 795 aa32.74■■■□□ 2.83
LSM7-205ENST00000589532 CHD4Q14839 1912 aa32.74■■■□□ 2.83
LSM7-205ENST00000589532 POLD1P28340 1107 aa32.73■■■□□ 2.83
LSM7-205ENST00000589532 PIGBQ92521 554 aa32.73■■■□□ 2.83
LSM7-205ENST00000589532 TNNT2P45379 298 aaPredicted RBP32.72■■■□□ 2.83
LSM7-205ENST00000589532 PHKG2P15735 406 aa32.7■■■□□ 2.83
LSM7-205ENST00000589532 SMARCC1Q92922 1105 aaPredicted RBP32.69■■■□□ 2.82
LSM7-205ENST00000589532 AMIGO3Q86WK7 504 aa32.66■■■□□ 2.82
LSM7-205ENST00000589532 IFNL2Q8IZJ0 200 aa32.65■■■□□ 2.82
LSM7-205ENST00000589532 ZNF831Q5JPB2 1677 aa32.64■■■□□ 2.82
LSM7-205ENST00000589532 KDRP35968 1356 aa32.63■■■□□ 2.81
LSM7-205ENST00000589532 NLGN2Q8NFZ4 835 aa32.63■■■□□ 2.81
LSM7-205ENST00000589532 HMGB2P26583 209 aaKnown RBP32.62■■■□□ 2.81
LSM7-205ENST00000589532 FLAD1Q8NFF5 587 aa32.61■■■□□ 2.81
LSM7-205ENST00000589532 TMOD3Q9NYL9 352 aa32.61■■■□□ 2.81
LSM7-205ENST00000589532 KDM6AO15550 1401 aaPredicted RBP32.6■■■□□ 2.81
LSM7-205ENST00000589532 LOC102724428A0A0B4J2F2 783 aa32.6■■■□□ 2.81
LSM7-205ENST00000589532 SIK1P57059 783 aa32.6■■■□□ 2.81
LSM7-205ENST00000589532 MSL1Q68DK7 614 aa32.6■■■□□ 2.81
LSM7-205ENST00000589532 MSH5O43196 834 aa32.59■■■□□ 2.81
LSM7-205ENST00000589532 KLHL34Q8N239 644 aa32.59■■■□□ 2.81
LSM7-205ENST00000589532 LINC00116Q8NCU8 138 aa32.59■■■□□ 2.81
LSM7-205ENST00000589532 ASAP1Q9ULH1 1129 aa32.59■■■□□ 2.81
LSM7-205ENST00000589532 COL5A3P25940 1745 aaPredicted RBP32.58■■■□□ 2.81
LSM7-205ENST00000589532 KIF7Q2M1P5 1343 aa32.57■■■□□ 2.8
LSM7-205ENST00000589532 ZNF784Q8NCA9 323 aaPredicted RBP32.57■■■□□ 2.8
LSM7-205ENST00000589532 AK7Q96M32 723 aa32.57■■■□□ 2.8
LSM7-205ENST00000589532 ITPK1Q13572 414 aa32.56■■■□□ 2.8
LSM7-205ENST00000589532 AMER1Q5JTC6 1135 aaPredicted RBP32.56■■■□□ 2.8
LSM7-205ENST00000589532 MORC1Q86VD1 984 aa32.56■■■□□ 2.8
LSM7-205ENST00000589532 ATG3Q9NT62 314 aa32.55■■■□□ 2.8
LSM7-205ENST00000589532 AEBP1Q8IUX7 1158 aa32.54■■■□□ 2.8
LSM7-205ENST00000589532 SSFA2P28290 1259 aa32.52■■■□□ 2.8
LSM7-205ENST00000589532 GPR162Q16538 588 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms