RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 PLIN1O60240 522 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 FRAT2O75474 233 aaPredicted RBP4.26□□□□□ -1.73
LINC01539-203ENST00000589447 TMF1P82094 1093 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 AAMPQ13685 434 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 SH3D19Q5HYK7 790 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 EFCAB2Q5VUJ9 269 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 CC2D2BQ6DHV5 1058 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 TMEM92Q6UXU6 159 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 NGEFQ8N5V2 710 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 ISY1Q9ULR0 285 aaKnown RBP4.26□□□□□ -1.73
LINC01539-203ENST00000589447 DUOX2Q9NRD8 1548 aa4.26□□□□□ -1.73
LINC01539-203ENST00000589447 NCKAP5LQ9HCH0 1330 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 GOLGA6L3A6NEY3 463 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 SPDYE5A6NIY4 337 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 ERCC3P19447 782 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 PTMSP20962 102 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 HNRNPMP52272 730 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC01539-203ENST00000589447 MAP2K5Q13163 448 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 CDCA8Q53HL2 280 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 NALCNQ8IZF0 1738 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 DCAF11Q8TEB1 546 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 MARVELD3Q96A59 401 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 CDCA7LQ96GN5 454 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 PKNOX2Q96KN3 472 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 SPATA32Q96LK8 384 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 BCCIPQ9P287 314 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC01539-203ENST00000589447 TET3O43151 1660 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 ADGRB3O60242 1522 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 CPS1P31327 1500 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 LRRC7Q96NW7 1537 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 NPC1L1Q9UHC9 1359 aa4.25□□□□□ -1.73
LINC01539-203ENST00000589447 COL16A1Q07092 1604 aaPredicted RBP4.24□□□□□ -1.73
LINC01539-203ENST00000589447 PHLPP1O60346 1717 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 SENP3-EIF4A1A0A087X0R7 540 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 UNCXA6NJT0 531 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 IRF6O14896 467 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 GPR37O15354 613 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 RRP9O43818 475 aaKnown RBP4.24□□□□□ -1.73
LINC01539-203ENST00000589447 SLC34A2O95436 690 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 HSP90AA1P07900 732 aaKnown RBP4.24□□□□□ -1.73
LINC01539-203ENST00000589447 TSPY4P0CV99 314 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 TSPY10P0CW01 314 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 CLCN1P35523 988 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 SLC4A3P48751 1232 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 RGS3P49796 1198 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 TAF7LQ5H9L4 462 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 DUSP27Q5VZP5 1158 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 ANKRD13AQ8IZ07 590 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 TMC2Q8TDI7 906 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 POM121Q96HA1 1249 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 NAP1L5Q96NT1 182 aaPredicted RBP4.24□□□□□ -1.73
LINC01539-203ENST00000589447 HS3ST6Q96QI5 342 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 PNNQ9H307 717 aaKnown RBP4.24□□□□□ -1.73
LINC01539-203ENST00000589447 CWC22Q9HCG8 908 aaKnown RBP4.24□□□□□ -1.73
LINC01539-203ENST00000589447 ZNF330Q9Y3S2 320 aaPredicted RBP4.24□□□□□ -1.73
LINC01539-203ENST00000589447 SLIT1O75093 1534 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 TMEM131LA2VDJ0 1609 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 MED14O60244 1454 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 NLRP1Q9C000 1473 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 ARHGAP23Q9P227 1491 aa4.24□□□□□ -1.73
LINC01539-203ENST00000589447 XRN1Q8IZH2 1706 aaKnown RBP4.24□□□□□ -1.73
LINC01539-203ENST00000589447 SPAG9O60271 1321 aaKnown RBP4.23□□□□□ -1.73
LINC01539-203ENST00000589447 ZNF521Q96K83 1311 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 DDX11L8A8MPP1 907 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 PER1O15534 1290 aaPredicted RBP4.23□□□□□ -1.73
LINC01539-203ENST00000589447 MLLT3P42568 568 aaPredicted RBP4.23□□□□□ -1.73
LINC01539-203ENST00000589447 PDE3AQ14432 1141 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 CC2D1BQ5T0F9 858 aaKnown RBP4.23□□□□□ -1.73
LINC01539-203ENST00000589447 PMFBP1Q8TBY8 1022 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 PBXIP1Q96AQ6 731 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 DRC1Q96MC2 740 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 C8orf37Q96NL8 207 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 PANK3Q9H999 370 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 COG6Q9Y2V7 657 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 TNRQ92752 1358 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 PLEKHH1Q9ULM0 1364 aa4.23□□□□□ -1.73
LINC01539-203ENST00000589447 SHPRHQ149N8 1683 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 RTEL1-TNFRSF6BF6WH68 1400 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 USP32Q8NFA0 1604 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.22□□□□□ -1.73
LINC01539-203ENST00000589447 FAM205CA6NFA0 338 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 TPM2P07951 284 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 MRE11P49959 708 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 SLFN5Q08AF3 891 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 HSP90AA2PQ14568 343 aaPredicted RBP4.22□□□□□ -1.73
LINC01539-203ENST00000589447 C20orf194Q5TEA3 1177 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 FBXO31Q5XUX0 539 aaPredicted RBP4.22□□□□□ -1.73
LINC01539-203ENST00000589447 CERS3Q8IU89 383 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 BANK1Q8NDB2 785 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 CCDC102AQ96A19 550 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 PSMD1Q99460 953 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 POGKQ9P215 609 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 KNSTRNQ9Y448 316 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 KIF1BO60333 1816 aa4.22□□□□□ -1.73
LINC01539-203ENST00000589447 SCAF11Q99590 1463 aaKnown RBP4.22□□□□□ -1.73
LINC01539-203ENST00000589447 ERBB3P21860 1342 aa4.21□□□□□ -1.73
LINC01539-203ENST00000589447 CENPJQ9HC77 1338 aaPredicted RBP4.21□□□□□ -1.73
LINC01539-203ENST00000589447 NPHP4O75161 1426 aaPredicted RBP4.21□□□□□ -1.73
LINC01539-203ENST00000589447 TRPM2O94759 1503 aa4.21□□□□□ -1.73
LINC01539-203ENST00000589447 NHSL1Q5SYE7 1610 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms