RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 EYA1Q99502 592 aa28.39■■■□□ 2.13
MBD3-205ENST00000589064 NSD2O96028 1365 aa28.38■■■□□ 2.13
MBD3-205ENST00000589064 RGPD2P0DJD1 1756 aa28.36■■■□□ 2.13
MBD3-205ENST00000589064 PRIM1P49642 420 aaKnown RBP28.36■■■□□ 2.13
MBD3-205ENST00000589064 EIF4A2Q14240 407 aaKnown RBP28.35■■■□□ 2.13
MBD3-205ENST00000589064 AMER1Q5JTC6 1135 aaPredicted RBP28.35■■■□□ 2.13
MBD3-205ENST00000589064 SYTL4Q96C24 671 aaPredicted RBP28.35■■■□□ 2.13
MBD3-205ENST00000589064 ANO8Q9HCE9 1232 aaPredicted RBP28.34■■■□□ 2.13
MBD3-205ENST00000589064 PER1O15534 1290 aaPredicted RBP28.33■■■□□ 2.13
MBD3-205ENST00000589064 RREB1Q92766 1687 aa28.33■■■□□ 2.13
MBD3-205ENST00000589064 NUP188Q5SRE5 1749 aa28.3■■■□□ 2.12
MBD3-205ENST00000589064 PCDH11XQ9BZA7 1347 aa28.29■■■□□ 2.12
MBD3-205ENST00000589064 PCDH11YQ9BZA8 1340 aa28.29■■■□□ 2.12
MBD3-205ENST00000589064 CYP27B1O15528 508 aa28.28■■■□□ 2.12
MBD3-205ENST00000589064 MAP2P11137 1827 aaKnown RBP28.27■■■□□ 2.12
MBD3-205ENST00000589064 NHSQ6T4R5 1651 aa28.27■■■□□ 2.12
MBD3-205ENST00000589064 STK32BQ9NY57 414 aa28.27■■■□□ 2.12
MBD3-205ENST00000589064 NCAPD2Q15021 1401 aa28.26■■■□□ 2.11
MBD3-205ENST00000589064 CC2D1BQ5T0F9 858 aaKnown RBP28.26■■■□□ 2.11
MBD3-205ENST00000589064 SPG7Q9UQ90 795 aa28.26■■■□□ 2.11
MBD3-205ENST00000589064 SLC15A2Q16348 729 aa28.24■■■□□ 2.11
MBD3-205ENST00000589064 LRRC4BQ9NT99 713 aa28.24■■■□□ 2.11
MBD3-205ENST00000589064 ANKRD26Q9UPS8 1709 aa28.24■■■□□ 2.11
MBD3-205ENST00000589064 RGPD3A6NKT7 1758 aaPredicted RBP28.23■■■□□ 2.11
MBD3-205ENST00000589064 RGPD4Q7Z3J3 1758 aa28.23■■■□□ 2.11
MBD3-205ENST00000589064 CNGB1Q14028 1251 aaPredicted RBP28.23■■■□□ 2.11
MBD3-205ENST00000589064 IGSF1Q8N6C5 1336 aa28.21■■■□□ 2.11
MBD3-205ENST00000589064 PDGFDQ9GZP0 370 aaPredicted RBP28.21■■■□□ 2.11
MBD3-205ENST00000589064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.21■■■□□ 2.11
MBD3-205ENST00000589064 KAT6BQ8WYB5 2073 aa28.2■■■□□ 2.1
MBD3-205ENST00000589064 KCNQ4P56696 695 aa28.2■■■□□ 2.1
MBD3-205ENST00000589064 MTHFSP49914 203 aa28.19■■■□□ 2.1
MBD3-205ENST00000589064 SLC27A3Q5K4L6 730 aa28.19■■■□□ 2.1
MBD3-205ENST00000589064 MPRIPQ6WCQ1 1025 aa28.19■■■□□ 2.1
MBD3-205ENST00000589064 SHANK3Q9BYB0 1731 aa28.18■■■□□ 2.1
MBD3-205ENST00000589064 NKX1-1Q15270 411 aaPredicted RBP28.18■■■□□ 2.1
MBD3-205ENST00000589064 SPON1Q9HCB6 807 aa28.18■■■□□ 2.1
MBD3-205ENST00000589064 BTAF1O14981 1849 aa28.17■■■□□ 2.1
MBD3-205ENST00000589064 IL13P35225 146 aa28.17■■■□□ 2.1
MBD3-205ENST00000589064 LRP5O75197 1615 aa28.16■■■□□ 2.1
MBD3-205ENST00000589064 AEBP1Q8IUX7 1158 aa28.15■■■□□ 2.1
MBD3-205ENST00000589064 IFNL2Q8IZJ0 200 aa28.15■■■□□ 2.1
MBD3-205ENST00000589064 PHKG2P15735 406 aa28.15■■■□□ 2.1
MBD3-205ENST00000589064 ZNF827Q17R98 1081 aa28.15■■■□□ 2.1
MBD3-205ENST00000589064 ZBTB7AO95365 584 aa28.13■■■□□ 2.09
MBD3-205ENST00000589064 PLEKHO1Q53GL0 409 aaPredicted RBP28.13■■■□□ 2.09
MBD3-205ENST00000589064 SULT6B1Q6IMI4 303 aa28.13■■■□□ 2.09
MBD3-205ENST00000589064 CCNL1Q9UK58 526 aaPredicted RBP28.13■■■□□ 2.09
MBD3-205ENST00000589064 PIGBQ92521 554 aa28.12■■■□□ 2.09
MBD3-205ENST00000589064 AKT1S1Q96B36 256 aa28.12■■■□□ 2.09
MBD3-205ENST00000589064 DOT1LQ8TEK3 1739 aa28.11■■■□□ 2.09
MBD3-205ENST00000589064 NPC1L1Q9UHC9 1359 aa28.11■■■□□ 2.09
MBD3-205ENST00000589064 ATF5Q9Y2D1 282 aaPredicted RBP28.1■■■□□ 2.09
MBD3-205ENST00000589064 AMOTQ4VCS5 1084 aa28.08■■■□□ 2.09
MBD3-205ENST00000589064 PPP1R1BQ9UD71 204 aaPredicted RBP28.08■■■□□ 2.09
MBD3-205ENST00000589064 PKD1L3Q7Z443 1732 aa28.07■■■□□ 2.08
MBD3-205ENST00000589064 ZNF530Q6P9A1 599 aaPredicted RBP28.06■■■□□ 2.08
MBD3-205ENST00000589064 SMARCC1Q92922 1105 aaPredicted RBP28.06■■■□□ 2.08
MBD3-205ENST00000589064 TMOD3Q9NYL9 352 aa28.06■■■□□ 2.08
MBD3-205ENST00000589064 TFCP2L1Q9NZI6 479 aa28.06■■■□□ 2.08
MBD3-205ENST00000589064 PALLDQ8WX93 1383 aa28.05■■■□□ 2.08
MBD3-205ENST00000589064 PLEKHG2Q9H7P9 1386 aa28.05■■■□□ 2.08
MBD3-205ENST00000589064 DIAPH1O60610 1272 aaKnown RBP28.05■■■□□ 2.08
MBD3-205ENST00000589064 PAPPAQ13219 1627 aa28.02■■■□□ 2.08
MBD3-205ENST00000589064 HSP90AB1P08238 724 aaKnown RBP28.02■■■□□ 2.08
MBD3-205ENST00000589064 HMOX1P09601 288 aa28.02■■■□□ 2.08
MBD3-205ENST00000589064 PTGER2P43116 358 aa28.02■■■□□ 2.08
MBD3-205ENST00000589064 DCAF5Q96JK2 942 aa28.02■■■□□ 2.08
MBD3-205ENST00000589064 MTFR1LQ9H019 292 aa28.02■■■□□ 2.08
MBD3-205ENST00000589064 KDRP35968 1356 aa28.01■■■□□ 2.08
MBD3-205ENST00000589064 ASAP1Q9ULH1 1129 aa28.01■■■□□ 2.07
MBD3-205ENST00000589064 C1orf141Q5JVX7 400 aa28■■■□□ 2.07
MBD3-205ENST00000589064 PNPLA7Q6ZV29 1317 aa28■■■□□ 2.07
MBD3-205ENST00000589064 CASZ1Q86V15 1759 aa27.99■■■□□ 2.07
MBD3-205ENST00000589064 ERVV-2B6SEH9 535 aa27.99■■■□□ 2.07
MBD3-205ENST00000589064 ATG3Q9NT62 314 aa27.97■■■□□ 2.07
MBD3-205ENST00000589064 TOGARAM1Q9Y4F4 1720 aa27.97■■■□□ 2.07
MBD3-205ENST00000589064 LOC102724428A0A0B4J2F2 783 aa27.95■■■□□ 2.07
MBD3-205ENST00000589064 U2SURPO15042 1029 aaKnown RBP27.95■■■□□ 2.07
MBD3-205ENST00000589064 SIK1P57059 783 aa27.95■■■□□ 2.07
MBD3-205ENST00000589064 CABP4P57796 275 aa27.95■■■□□ 2.07
MBD3-205ENST00000589064 HMGB2P26583 209 aaKnown RBP27.95■■■□□ 2.06
MBD3-205ENST00000589064 SLC16A10Q8TF71 515 aa27.95■■■□□ 2.06
MBD3-205ENST00000589064 SGIP1Q9BQI5 828 aa27.95■■■□□ 2.06
MBD3-205ENST00000589064 LY75O60449 1722 aa27.95■■■□□ 2.06
MBD3-205ENST00000589064 MSH5O43196 834 aa27.93■■■□□ 2.06
MBD3-205ENST00000589064 COL23A1Q86Y22 540 aaPredicted RBP27.93■■■□□ 2.06
MBD3-205ENST00000589064 KDM6AO15550 1401 aaPredicted RBP27.92■■■□□ 2.06
MBD3-205ENST00000589064 PPP2R1AP30153 589 aa27.92■■■□□ 2.06
MBD3-205ENST00000589064 AKAP4Q5JQC9 854 aa27.91■■■□□ 2.06
MBD3-205ENST00000589064 ATP6V1AP38606 617 aa27.9■■■□□ 2.06
MBD3-205ENST00000589064 MTHFSDQ2M296 383 aaKnown RBP27.9■■■□□ 2.06
MBD3-205ENST00000589064 NFATC2IPQ8NCF5 419 aa27.9■■■□□ 2.06
MBD3-205ENST00000589064 CFAP53Q96M91 514 aa27.9■■■□□ 2.06
MBD3-205ENST00000589064 ITGB4P16144 1822 aa27.9■■■□□ 2.06
MBD3-205ENST00000589064 ITPK1Q13572 414 aa27.89■■■□□ 2.05
MBD3-205ENST00000589064 LINC00116Q8NCU8 138 aa27.89■■■□□ 2.05
MBD3-205ENST00000589064 AK7Q96M32 723 aa27.89■■■□□ 2.05
MBD3-205ENST00000589064 RBM42Q9BTD8 480 aaKnown RBP27.89■■■□□ 2.05
MBD3-205ENST00000589064 COL3A1P02461 1466 aaPredicted RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms