RNA–Protein interactions for RNA: ENST00000588921.1

ATP9B-216, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 1 (best)

Gene ATP9B, Length 1,511 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-216ENST00000588921 KAT6BQ8WYB5 2073 aa18.65■□□□□ 0.58
ATP9B-216ENST00000588921 DDX54Q8TDD1 881 aaKnown RBP18.65■□□□□ 0.58
ATP9B-216ENST00000588921 SBF2Q86WG5 1849 aa18.65■□□□□ 0.58
ATP9B-216ENST00000588921 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
ATP9B-216ENST00000588921 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
ATP9B-216ENST00000588921 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
ATP9B-216ENST00000588921 DIAPH1O60610 1272 aaKnown RBP18.64■□□□□ 0.58
ATP9B-216ENST00000588921 SPG7Q9UQ90 795 aa18.64■□□□□ 0.58
ATP9B-216ENST00000588921 TNS1Q9HBL0 1735 aaKnown RBP18.64■□□□□ 0.57
ATP9B-216ENST00000588921 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.63■□□□□ 0.57
ATP9B-216ENST00000588921 APBA3O96018 575 aa18.62■□□□□ 0.57
ATP9B-216ENST00000588921 IL13P35225 146 aa18.62■□□□□ 0.57
ATP9B-216ENST00000588921 RALBP1Q15311 655 aa18.62■□□□□ 0.57
ATP9B-216ENST00000588921 BCL11BQ9C0K0 894 aaPredicted RBP18.62■□□□□ 0.57
ATP9B-216ENST00000588921 PKD1L3Q7Z443 1732 aa18.61■□□□□ 0.57
ATP9B-216ENST00000588921 PARD3Q8TEW0 1356 aa18.61■□□□□ 0.57
ATP9B-216ENST00000588921 PPP2R1AP30153 589 aa18.6■□□□□ 0.57
ATP9B-216ENST00000588921 NUDCQ9Y266 331 aa18.6■□□□□ 0.57
ATP9B-216ENST00000588921 SHANK3Q9BYB0 1731 aa18.59■□□□□ 0.57
ATP9B-216ENST00000588921 AMOTQ4VCS5 1084 aa18.59■□□□□ 0.57
ATP9B-216ENST00000588921 NHSQ6T4R5 1651 aa18.59■□□□□ 0.57
ATP9B-216ENST00000588921 ANP32CO43423 234 aa18.59■□□□□ 0.57
ATP9B-216ENST00000588921 PLEKHO1Q53GL0 409 aaPredicted RBP18.59■□□□□ 0.57
ATP9B-216ENST00000588921 SULT6B1Q6IMI4 303 aa18.59■□□□□ 0.57
ATP9B-216ENST00000588921 DEFB132Q7Z7B7 95 aa18.59■□□□□ 0.57
ATP9B-216ENST00000588921 RGPD3A6NKT7 1758 aaPredicted RBP18.57■□□□□ 0.56
ATP9B-216ENST00000588921 RGPD4Q7Z3J3 1758 aa18.57■□□□□ 0.56
ATP9B-216ENST00000588921 KDRP35968 1356 aa18.57■□□□□ 0.56
ATP9B-216ENST00000588921 U2SURPO15042 1029 aaKnown RBP18.56■□□□□ 0.56
ATP9B-216ENST00000588921 EN1Q05925 392 aaPredicted RBP18.56■□□□□ 0.56
ATP9B-216ENST00000588921 IFNL2Q8IZJ0 200 aa18.56■□□□□ 0.56
ATP9B-216ENST00000588921 PLSCR1O15162 318 aa18.55■□□□□ 0.56
ATP9B-216ENST00000588921 HSP90AB1P08238 724 aaKnown RBP18.55■□□□□ 0.56
ATP9B-216ENST00000588921 ACSBG1Q96GR2 724 aa18.55■□□□□ 0.56
ATP9B-216ENST00000588921 DOT1LQ8TEK3 1739 aa18.55■□□□□ 0.56
ATP9B-216ENST00000588921 SYTL4Q96C24 671 aaPredicted RBP18.54■□□□□ 0.56
ATP9B-216ENST00000588921 COL3A1P02461 1466 aaPredicted RBP18.54■□□□□ 0.56
ATP9B-216ENST00000588921 C1orf141Q5JVX7 400 aa18.54■□□□□ 0.56
ATP9B-216ENST00000588921 CYP27B1O15528 508 aa18.52■□□□□ 0.56
ATP9B-216ENST00000588921 AEBP1Q8IUX7 1158 aa18.52■□□□□ 0.56
ATP9B-216ENST00000588921 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
ATP9B-216ENST00000588921 HMOX1P09601 288 aa18.51■□□□□ 0.55
ATP9B-216ENST00000588921 HMGB2P26583 209 aaKnown RBP18.51■□□□□ 0.55
ATP9B-216ENST00000588921 NKX1-1Q15270 411 aaPredicted RBP18.51■□□□□ 0.55
ATP9B-216ENST00000588921 CAMKK2Q96RR4 588 aa18.51■□□□□ 0.55
ATP9B-216ENST00000588921 BTAF1O14981 1849 aa18.51■□□□□ 0.55
ATP9B-216ENST00000588921 CCER2I3L3R5 266 aa18.5■□□□□ 0.55
ATP9B-216ENST00000588921 KCNQ2O43526 872 aa18.5■□□□□ 0.55
ATP9B-216ENST00000588921 PHKG2P15735 406 aa18.5■□□□□ 0.55
ATP9B-216ENST00000588921 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
ATP9B-216ENST00000588921 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
ATP9B-216ENST00000588921 ZNF530Q6P9A1 599 aaPredicted RBP18.5■□□□□ 0.55
ATP9B-216ENST00000588921 NEFMP07197 916 aa18.49■□□□□ 0.55
ATP9B-216ENST00000588921 NBPF14Q5TI25 921 aa18.49■□□□□ 0.55
ATP9B-216ENST00000588921 RREB1Q92766 1687 aa18.49■□□□□ 0.55
ATP9B-216ENST00000588921 U2AF1L5P0DN76 240 aaPredicted RBP18.49■□□□□ 0.55
ATP9B-216ENST00000588921 U2AF1Q01081 240 aaKnown RBP eCLIP18.49■□□□□ 0.55
ATP9B-216ENST00000588921 DCAF5Q96JK2 942 aa18.48■□□□□ 0.55
ATP9B-216ENST00000588921 PNNQ9H307 717 aaKnown RBP18.48■□□□□ 0.55
ATP9B-216ENST00000588921 ITGB4P16144 1822 aa18.46■□□□□ 0.55
ATP9B-216ENST00000588921 FCHSD2O94868 740 aa18.46■□□□□ 0.55
ATP9B-216ENST00000588921 AKAP4Q5JQC9 854 aa18.46■□□□□ 0.55
ATP9B-216ENST00000588921 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
ATP9B-216ENST00000588921 PRKRIP1Q9H875 184 aaPredicted RBP18.46■□□□□ 0.55
ATP9B-216ENST00000588921 MPRIPQ6WCQ1 1025 aa18.45■□□□□ 0.54
ATP9B-216ENST00000588921 PTF1AQ7RTS3 328 aa18.45■□□□□ 0.54
ATP9B-216ENST00000588921 YTHDC1Q96MU7 727 aaKnown RBP18.45■□□□□ 0.54
ATP9B-216ENST00000588921 TMOD3Q9NYL9 352 aa18.45■□□□□ 0.54
ATP9B-216ENST00000588921 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
ATP9B-216ENST00000588921 TXNRD1Q16881 649 aa18.44■□□□□ 0.54
ATP9B-216ENST00000588921 SMARCC1Q92922 1105 aaPredicted RBP18.44■□□□□ 0.54
ATP9B-216ENST00000588921 NUP188Q5SRE5 1749 aa18.44■□□□□ 0.54
ATP9B-216ENST00000588921 SLC27A3Q5K4L6 730 aa18.44■□□□□ 0.54
ATP9B-216ENST00000588921 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
ATP9B-216ENST00000588921 PRKAR2BP31323 418 aa18.43■□□□□ 0.54
ATP9B-216ENST00000588921 CABP4P57796 275 aa18.41■□□□□ 0.54
ATP9B-216ENST00000588921 RSPH6AQ9H0K4 717 aa18.41■□□□□ 0.54
ATP9B-216ENST00000588921 LY75O60449 1722 aa18.4■□□□□ 0.54
ATP9B-216ENST00000588921 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
ATP9B-216ENST00000588921 SCN11AQ9UI33 1791 aa18.4■□□□□ 0.54
ATP9B-216ENST00000588921 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.54
ATP9B-216ENST00000588921 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.54
ATP9B-216ENST00000588921 VIRMAQ69YN4 1812 aaKnown RBP18.39■□□□□ 0.53
ATP9B-216ENST00000588921 GNAT3A8MTJ3 354 aa18.39■□□□□ 0.53
ATP9B-216ENST00000588921 PIGBQ92521 554 aa18.39■□□□□ 0.53
ATP9B-216ENST00000588921 STK32BQ9NY57 414 aa18.39■□□□□ 0.53
ATP9B-216ENST00000588921 MAPK8IP3Q9UPT6 1336 aa18.38■□□□□ 0.53
ATP9B-216ENST00000588921 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
ATP9B-216ENST00000588921 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
ATP9B-216ENST00000588921 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
ATP9B-216ENST00000588921 PROM2Q8N271 834 aa18.37■□□□□ 0.53
ATP9B-216ENST00000588921 KDM6AO15550 1401 aaPredicted RBP18.36■□□□□ 0.53
ATP9B-216ENST00000588921 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
ATP9B-216ENST00000588921 R3HDM1Q15032 1099 aaKnown RBP18.35■□□□□ 0.53
ATP9B-216ENST00000588921 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
ATP9B-216ENST00000588921 TEFQ10587 303 aa18.33■□□□□ 0.53
ATP9B-216ENST00000588921 NFATC2IPQ8NCF5 419 aa18.33■□□□□ 0.53
ATP9B-216ENST00000588921 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.53
ATP9B-216ENST00000588921 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.53
ATP9B-216ENST00000588921 PSDA5PKW4 1024 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms