RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 AMOTQ4VCS5 1084 aa19■□□□□ 0.63
NPC1-207ENST00000588867 LMOD3Q0VAK6 560 aa18.99■□□□□ 0.63
NPC1-207ENST00000588867 UNC5CLQ8IV45 518 aa18.99■□□□□ 0.63
NPC1-207ENST00000588867 NWD2Q9ULI1 1742 aa18.99■□□□□ 0.63
NPC1-207ENST00000588867 MEGF6O75095 1541 aa18.98■□□□□ 0.63
NPC1-207ENST00000588867 IL2RBP14784 551 aa18.98■□□□□ 0.63
NPC1-207ENST00000588867 DCTN1Q14203 1278 aa18.98■□□□□ 0.63
NPC1-207ENST00000588867 ZNF530Q6P9A1 599 aaPredicted RBP18.98■□□□□ 0.63
NPC1-207ENST00000588867 WDR63Q8IWG1 891 aa18.98■□□□□ 0.63
NPC1-207ENST00000588867 FNBP4Q8N3X1 1017 aaPredicted RBP18.98■□□□□ 0.63
NPC1-207ENST00000588867 USP21Q9UK80 565 aa18.98■□□□□ 0.63
NPC1-207ENST00000588867 NRAPQ86VF7 1730 aa18.97■□□□□ 0.63
NPC1-207ENST00000588867 RTF1Q92541 710 aaKnown RBP18.97■□□□□ 0.63
NPC1-207ENST00000588867 THUMPD2Q9BTF0 503 aaKnown RBP18.97■□□□□ 0.63
NPC1-207ENST00000588867 GNAT3A8MTJ3 354 aa18.96■□□□□ 0.63
NPC1-207ENST00000588867 SPG7Q9UQ90 795 aa18.96■□□□□ 0.63
NPC1-207ENST00000588867 MCM10Q7L590 875 aa18.96■□□□□ 0.63
NPC1-207ENST00000588867 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
NPC1-207ENST00000588867 SPINK5Q9NQ38 1064 aaPredicted RBP18.95■□□□□ 0.62
NPC1-207ENST00000588867 BCL9LQ86UU0 1499 aa18.95■□□□□ 0.62
NPC1-207ENST00000588867 SPATA31A1Q5TZJ5 1347 aa18.95■□□□□ 0.62
NPC1-207ENST00000588867 AFF2P51816 1311 aa18.94■□□□□ 0.62
NPC1-207ENST00000588867 SLFN5Q08AF3 891 aa18.94■□□□□ 0.62
NPC1-207ENST00000588867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.94■□□□□ 0.62
NPC1-207ENST00000588867 MAP3K5Q99683 1374 aa18.93■□□□□ 0.62
NPC1-207ENST00000588867 SPATA31A5Q5VU36 1347 aa18.93■□□□□ 0.62
NPC1-207ENST00000588867 SPATA31A7Q8IWB4 1347 aa18.93■□□□□ 0.62
NPC1-207ENST00000588867 AKAP4Q5JQC9 854 aa18.93■□□□□ 0.62
NPC1-207ENST00000588867 LAS1LQ9Y4W2 734 aaKnown RBP18.93■□□□□ 0.62
NPC1-207ENST00000588867 E9PSI1 815 aa18.93■□□□□ 0.62
NPC1-207ENST00000588867 ZCRB1Q8TBF4 217 aaKnown RBP18.93■□□□□ 0.62
NPC1-207ENST00000588867 HTATSF1O43719 755 aaKnown RBP18.92■□□□□ 0.62
NPC1-207ENST00000588867 CALD1Q05682 793 aaKnown RBP18.92■□□□□ 0.62
NPC1-207ENST00000588867 VPS72Q15906 364 aa18.92■□□□□ 0.62
NPC1-207ENST00000588867 PARP4Q9UKK3 1724 aaKnown RBP18.92■□□□□ 0.62
NPC1-207ENST00000588867 OVOS2A0A0G2JMS6 1433 aa18.92■□□□□ 0.62
NPC1-207ENST00000588867 THRAP3Q9Y2W1 955 aaKnown RBP18.91■□□□□ 0.62
NPC1-207ENST00000588867 MPRIPQ6WCQ1 1025 aa18.91■□□□□ 0.62
NPC1-207ENST00000588867 IFNL2Q8IZJ0 200 aa18.9■□□□□ 0.62
NPC1-207ENST00000588867 IL17REQ8NFR9 667 aa18.9■□□□□ 0.62
NPC1-207ENST00000588867 DUSP27Q5VZP5 1158 aa18.9■□□□□ 0.62
NPC1-207ENST00000588867 DDX54Q8TDD1 881 aaKnown RBP18.9■□□□□ 0.62
NPC1-207ENST00000588867 MYH16Q9H6N6 1097 aa18.9■□□□□ 0.62
NPC1-207ENST00000588867 LGR6Q9HBX8 967 aa18.9■□□□□ 0.62
NPC1-207ENST00000588867 PLEKHG2Q9H7P9 1386 aa18.89■□□□□ 0.62
NPC1-207ENST00000588867 IL16Q14005 1332 aa18.89■□□□□ 0.61
NPC1-207ENST00000588867 PHKG2P15735 406 aa18.89■□□□□ 0.61
NPC1-207ENST00000588867 CYP27B1O15528 508 aa18.88■□□□□ 0.61
NPC1-207ENST00000588867 TRMT2AQ8IZ69 625 aaKnown RBP18.88■□□□□ 0.61
NPC1-207ENST00000588867 PCDH11XQ9BZA7 1347 aa18.88■□□□□ 0.61
NPC1-207ENST00000588867 PCDH11YQ9BZA8 1340 aa18.88■□□□□ 0.61
NPC1-207ENST00000588867 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
NPC1-207ENST00000588867 CDCA7Q9BWT1 371 aaPredicted RBP18.88■□□□□ 0.61
NPC1-207ENST00000588867 PKD1L3Q7Z443 1732 aa18.88■□□□□ 0.61
NPC1-207ENST00000588867 EXOC5O00471 708 aa18.87■□□□□ 0.61
NPC1-207ENST00000588867 GNAI1P63096 354 aa18.87■□□□□ 0.61
NPC1-207ENST00000588867 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
NPC1-207ENST00000588867 BARGINQ6ZT62 677 aa18.86■□□□□ 0.61
NPC1-207ENST00000588867 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.86■□□□□ 0.61
NPC1-207ENST00000588867 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
NPC1-207ENST00000588867 RNMTO43148 476 aaKnown RBP18.86■□□□□ 0.61
NPC1-207ENST00000588867 CFAP44Q96MT7 982 aa18.86■□□□□ 0.61
NPC1-207ENST00000588867 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
NPC1-207ENST00000588867 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
NPC1-207ENST00000588867 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
NPC1-207ENST00000588867 A0A0G2JS52 829 aa18.84■□□□□ 0.61
NPC1-207ENST00000588867 MYT1Q01538 1121 aa18.84■□□□□ 0.61
NPC1-207ENST00000588867 GJD4Q96KN9 370 aaPredicted RBP18.84■□□□□ 0.61
NPC1-207ENST00000588867 FANCIQ9NVI1 1328 aa18.84■□□□□ 0.61
NPC1-207ENST00000588867 HSP90AB1P08238 724 aaKnown RBP18.84■□□□□ 0.61
NPC1-207ENST00000588867 TEFQ10587 303 aa18.84■□□□□ 0.61
NPC1-207ENST00000588867 DDB1Q16531 1140 aa18.84■□□□□ 0.61
NPC1-207ENST00000588867 MIS18AQ9NYP9 233 aa18.84■□□□□ 0.61
NPC1-207ENST00000588867 WNK3Q9BYP7 1800 aa18.84■□□□□ 0.61
NPC1-207ENST00000588867 ZNF853P0CG23 659 aa18.83■□□□□ 0.61
NPC1-207ENST00000588867 DCAF5Q96JK2 942 aa18.83■□□□□ 0.61
NPC1-207ENST00000588867 MBIPQ9NS73 344 aa18.83■□□□□ 0.61
NPC1-207ENST00000588867 CEMIPQ8WUJ3 1361 aa18.83■□□□□ 0.6
NPC1-207ENST00000588867 TAF7Q15545 349 aaPredicted RBP18.83■□□□□ 0.6
NPC1-207ENST00000588867 VIRMAQ69YN4 1812 aaKnown RBP18.82■□□□□ 0.6
NPC1-207ENST00000588867 CHL1O00533 1208 aa18.81■□□□□ 0.6
NPC1-207ENST00000588867 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
NPC1-207ENST00000588867 SHANK3Q9BYB0 1731 aa18.81■□□□□ 0.6
NPC1-207ENST00000588867 ATRNO75882 1429 aa18.8■□□□□ 0.6
NPC1-207ENST00000588867 EXOSC9Q06265 439 aaKnown RBP18.8■□□□□ 0.6
NPC1-207ENST00000588867 KDM6AO15550 1401 aaPredicted RBP18.8■□□□□ 0.6
NPC1-207ENST00000588867 ZNF772Q68DY9 489 aaPredicted RBP18.79■□□□□ 0.6
NPC1-207ENST00000588867 NKX1-1Q15270 411 aaPredicted RBP18.79■□□□□ 0.6
NPC1-207ENST00000588867 LRRC37A3O60309 1634 aa18.79■□□□□ 0.6
NPC1-207ENST00000588867 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
NPC1-207ENST00000588867 TNS2Q63HR2 1409 aa18.78■□□□□ 0.6
NPC1-207ENST00000588867 NFATC2IPQ8NCF5 419 aa18.78■□□□□ 0.6
NPC1-207ENST00000588867 GLI3P10071 1580 aa18.78■□□□□ 0.6
NPC1-207ENST00000588867 BTBD11A6QL63 1104 aa18.78■□□□□ 0.6
NPC1-207ENST00000588867 CABP4P57796 275 aa18.78■□□□□ 0.6
NPC1-207ENST00000588867 SLC52A2Q9HAB3 445 aa18.78■□□□□ 0.6
NPC1-207ENST00000588867 RCAN3Q9UKA8 241 aa18.78■□□□□ 0.6
NPC1-207ENST00000588867 SUPT16HQ9Y5B9 1047 aaKnown RBP18.77■□□□□ 0.6
NPC1-207ENST00000588867 ADAMTS7Q9UKP4 1686 aa18.76■□□□□ 0.59
NPC1-207ENST00000588867 ELL2O00472 640 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms