RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 WDR43Q15061 677 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDK3-204ENST00000588812 MRS2Q9HD23 443 aa14.82□□□□□ -0.04
CDK3-204ENST00000588812 OVOS2A0A0G2JMS6 1433 aa14.82□□□□□ -0.04
CDK3-204ENST00000588812 MEGF6O75095 1541 aa14.82□□□□□ -0.04
CDK3-204ENST00000588812 PARP4Q9UKK3 1724 aaKnown RBP14.81□□□□□ -0.04
CDK3-204ENST00000588812 WNK3Q9BYP7 1800 aa14.81□□□□□ -0.04
CDK3-204ENST00000588812 ZCRB1Q8TBF4 217 aaKnown RBP14.81□□□□□ -0.04
CDK3-204ENST00000588812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDK3-204ENST00000588812 AMOTQ4VCS5 1084 aa14.8□□□□□ -0.04
CDK3-204ENST00000588812 KRT27Q7Z3Y8 459 aa14.8□□□□□ -0.04
CDK3-204ENST00000588812 UPF1Q92900 1129 aaKnown RBP eCLIP14.8□□□□□ -0.04
CDK3-204ENST00000588812 PNNQ9H307 717 aaKnown RBP14.8□□□□□ -0.04
CDK3-204ENST00000588812 SPG7Q9UQ90 795 aa14.8□□□□□ -0.04
CDK3-204ENST00000588812 CCER2I3L3R5 266 aa14.79□□□□□ -0.04
CDK3-204ENST00000588812 CCDC184Q52MB2 194 aa14.79□□□□□ -0.04
CDK3-204ENST00000588812 PLEKHO1Q53GL0 409 aaPredicted RBP14.79□□□□□ -0.04
CDK3-204ENST00000588812 TNS2Q63HR2 1409 aa14.79□□□□□ -0.04
CDK3-204ENST00000588812 RSPH6AQ9H0K4 717 aa14.79□□□□□ -0.04
CDK3-204ENST00000588812 MIER1Q8N108 512 aa14.78□□□□□ -0.04
CDK3-204ENST00000588812 LRRC37A3O60309 1634 aa14.77□□□□□ -0.04
CDK3-204ENST00000588812 PCDH11XQ9BZA7 1347 aa14.77□□□□□ -0.04
CDK3-204ENST00000588812 PCDH11YQ9BZA8 1340 aa14.77□□□□□ -0.04
CDK3-204ENST00000588812 NEFMP07197 916 aa14.77□□□□□ -0.05
CDK3-204ENST00000588812 PRKAR2BP31323 418 aa14.77□□□□□ -0.05
CDK3-204ENST00000588812 PNISRQ8TF01 805 aaKnown RBP14.77□□□□□ -0.05
CDK3-204ENST00000588812 DDX54Q8TDD1 881 aaKnown RBP14.76□□□□□ -0.05
CDK3-204ENST00000588812 ADAMTS8Q9UP79 889 aa14.76□□□□□ -0.05
CDK3-204ENST00000588812 MARCH10Q8NA82 808 aaPredicted RBP14.75□□□□□ -0.05
CDK3-204ENST00000588812 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
CDK3-204ENST00000588812 PKD1L3Q7Z443 1732 aa14.75□□□□□ -0.05
CDK3-204ENST00000588812 ZNF530Q6P9A1 599 aaPredicted RBP14.74□□□□□ -0.05
CDK3-204ENST00000588812 FAM196AQ6ZSG2 479 aa14.74□□□□□ -0.05
CDK3-204ENST00000588812 IFNL2Q8IZJ0 200 aa14.74□□□□□ -0.05
CDK3-204ENST00000588812 GAS2L2Q8NHY3 880 aa14.74□□□□□ -0.05
CDK3-204ENST00000588812 MAPK8IP3Q9UPT6 1336 aa14.73□□□□□ -0.05
CDK3-204ENST00000588812 CYP27B1O15528 508 aa14.73□□□□□ -0.05
CDK3-204ENST00000588812 C1orf141Q5JVX7 400 aa14.73□□□□□ -0.05
CDK3-204ENST00000588812 PHACTR3Q96KR7 559 aa14.73□□□□□ -0.05
CDK3-204ENST00000588812 PLEKHF1Q96S99 279 aa14.73□□□□□ -0.05
CDK3-204ENST00000588812 HSP90AB1P08238 724 aaKnown RBP14.72□□□□□ -0.05
CDK3-204ENST00000588812 PHKG2P15735 406 aa14.72□□□□□ -0.05
CDK3-204ENST00000588812 MTHFSDQ2M296 383 aaKnown RBP14.72□□□□□ -0.05
CDK3-204ENST00000588812 FAM182BQ5T319 152 aa14.72□□□□□ -0.05
CDK3-204ENST00000588812 RUNDC1Q96C34 613 aa14.72□□□□□ -0.05
CDK3-204ENST00000588812 BCL9O00512 1426 aa14.72□□□□□ -0.05
CDK3-204ENST00000588812 NKX1-1Q15270 411 aaPredicted RBP14.71□□□□□ -0.05
CDK3-204ENST00000588812 AKAP4Q5JQC9 854 aa14.71□□□□□ -0.05
CDK3-204ENST00000588812 SHANK3Q9BYB0 1731 aa14.7□□□□□ -0.06
CDK3-204ENST00000588812 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
CDK3-204ENST00000588812 CCDC146Q8IYE0 955 aa14.69□□□□□ -0.06
CDK3-204ENST00000588812 DCAF5Q96JK2 942 aa14.69□□□□□ -0.06
CDK3-204ENST00000588812 GNAT3A8MTJ3 354 aa14.68□□□□□ -0.06
CDK3-204ENST00000588812 NFE2L2Q16236 605 aa14.68□□□□□ -0.06
CDK3-204ENST00000588812 SRCAPQ6ZRS2 3230 aa14.68□□□□□ -0.06
CDK3-204ENST00000588812 MAP3K5Q99683 1374 aa14.67□□□□□ -0.06
CDK3-204ENST00000588812 HTATSF1O43719 755 aaKnown RBP14.66□□□□□ -0.06
CDK3-204ENST00000588812 MPRIPQ6WCQ1 1025 aa14.66□□□□□ -0.06
CDK3-204ENST00000588812 RTF1Q92541 710 aaKnown RBP14.66□□□□□ -0.06
CDK3-204ENST00000588812 ERVV-2B6SEH9 535 aa14.65□□□□□ -0.06
CDK3-204ENST00000588812 TRIM37O94972 964 aa14.65□□□□□ -0.06
CDK3-204ENST00000588812 TMPOP42166 694 aaKnown RBP14.65□□□□□ -0.06
CDK3-204ENST00000588812 CCDC125Q86Z20 511 aa14.65□□□□□ -0.06
CDK3-204ENST00000588812 ACSBG1Q96GR2 724 aa14.65□□□□□ -0.06
CDK3-204ENST00000588812 BCL11BQ9C0K0 894 aaPredicted RBP14.65□□□□□ -0.06
CDK3-204ENST00000588812 APAF1O14727 1248 aa14.64□□□□□ -0.07
CDK3-204ENST00000588812 RNMTO43148 476 aaKnown RBP14.64□□□□□ -0.07
CDK3-204ENST00000588812 PRIM1P49642 420 aaKnown RBP14.64□□□□□ -0.07
CDK3-204ENST00000588812 RIPK4P57078 832 aa14.64□□□□□ -0.07
CDK3-204ENST00000588812 LMOD3Q0VAK6 560 aa14.64□□□□□ -0.07
CDK3-204ENST00000588812 SYTL4Q96C24 671 aaPredicted RBP14.64□□□□□ -0.07
CDK3-204ENST00000588812 LGR6Q9HBX8 967 aa14.63□□□□□ -0.07
CDK3-204ENST00000588812 KDM6AO15550 1401 aaPredicted RBP14.63□□□□□ -0.07
CDK3-204ENST00000588812 KCNQ2O43526 872 aa14.62□□□□□ -0.07
CDK3-204ENST00000588812 CABP4P57796 275 aa14.62□□□□□ -0.07
CDK3-204ENST00000588812 SF3B2Q13435 895 aaKnown RBP14.62□□□□□ -0.07
CDK3-204ENST00000588812 NEUROD2Q15784 382 aa14.62□□□□□ -0.07
CDK3-204ENST00000588812 IL17REQ8NFR9 667 aa14.62□□□□□ -0.07
CDK3-204ENST00000588812 TMOD3Q9NYL9 352 aa14.62□□□□□ -0.07
CDK3-204ENST00000588812 RRP7AQ9Y3A4 280 aaKnown RBP14.62□□□□□ -0.07
CDK3-204ENST00000588812 KAT6BQ8WYB5 2073 aa14.62□□□□□ -0.07
CDK3-204ENST00000588812 SBF2Q86WG5 1849 aa14.62□□□□□ -0.07
CDK3-204ENST00000588812 TEFQ10587 303 aa14.61□□□□□ -0.07
CDK3-204ENST00000588812 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
CDK3-204ENST00000588812 SLC52A2Q9HAB3 445 aa14.61□□□□□ -0.07
CDK3-204ENST00000588812 NHSQ6T4R5 1651 aa14.61□□□□□ -0.07
CDK3-204ENST00000588812 DOT1LQ8TEK3 1739 aa14.61□□□□□ -0.07
CDK3-204ENST00000588812 CEMIPQ8WUJ3 1361 aa14.6□□□□□ -0.07
CDK3-204ENST00000588812 MCM10Q7L590 875 aa14.6□□□□□ -0.07
CDK3-204ENST00000588812 NGEFQ8N5V2 710 aa14.6□□□□□ -0.07
CDK3-204ENST00000588812 NFATC2IPQ8NCF5 419 aa14.6□□□□□ -0.07
CDK3-204ENST00000588812 ADAMTS7Q9UKP4 1686 aa14.6□□□□□ -0.07
CDK3-204ENST00000588812 SCN11AQ9UI33 1791 aa14.6□□□□□ -0.07
CDK3-204ENST00000588812 TOGARAM1Q9Y4F4 1720 aa14.59□□□□□ -0.07
CDK3-204ENST00000588812 APBA3O96018 575 aa14.59□□□□□ -0.07
CDK3-204ENST00000588812 PTF1AQ7RTS3 328 aa14.59□□□□□ -0.07
CDK3-204ENST00000588812 PIGBQ92521 554 aa14.59□□□□□ -0.07
CDK3-204ENST00000588812 DCTN1Q14203 1278 aa14.58□□□□□ -0.08
CDK3-204ENST00000588812 TRIM35Q9UPQ4 493 aa14.58□□□□□ -0.08
CDK3-204ENST00000588812 DLG5Q8TDM6 1919 aa14.58□□□□□ -0.08
CDK3-204ENST00000588812 MRC1P22897 1456 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms