RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 IL13P35225 146 aa10.96□□□□□ -0.65
APOC1-202ENST00000588750 AMOTQ4VCS5 1084 aa10.96□□□□□ -0.65
APOC1-202ENST00000588750 PNNQ9H307 717 aaKnown RBP10.96□□□□□ -0.65
APOC1-202ENST00000588750 PLEKHO1Q53GL0 409 aaPredicted RBP10.95□□□□□ -0.66
APOC1-202ENST00000588750 RGPD2P0DJD1 1756 aa10.95□□□□□ -0.66
APOC1-202ENST00000588750 BCL9O00512 1426 aa10.94□□□□□ -0.66
APOC1-202ENST00000588750 U2SURPO15042 1029 aaKnown RBP10.94□□□□□ -0.66
APOC1-202ENST00000588750 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
APOC1-202ENST00000588750 HMGB2P26583 209 aaKnown RBP10.94□□□□□ -0.66
APOC1-202ENST00000588750 SULT6B1Q6IMI4 303 aa10.94□□□□□ -0.66
APOC1-202ENST00000588750 USHBP1Q8N6Y0 703 aa10.94□□□□□ -0.66
APOC1-202ENST00000588750 PRKRIP1Q9H875 184 aaPredicted RBP10.94□□□□□ -0.66
APOC1-202ENST00000588750 BAG6P46379 1132 aa10.93□□□□□ -0.66
APOC1-202ENST00000588750 DDX54Q8TDD1 881 aaKnown RBP10.93□□□□□ -0.66
APOC1-202ENST00000588750 KDRP35968 1356 aa10.92□□□□□ -0.66
APOC1-202ENST00000588750 C1orf141Q5JVX7 400 aa10.92□□□□□ -0.66
APOC1-202ENST00000588750 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
APOC1-202ENST00000588750 UPF1Q92900 1129 aaKnown RBP eCLIP10.92□□□□□ -0.66
APOC1-202ENST00000588750 MEGF6O75095 1541 aa10.92□□□□□ -0.66
APOC1-202ENST00000588750 RGPD1P0DJD0 1748 aa10.92□□□□□ -0.66
APOC1-202ENST00000588750 FCHSD2O94868 740 aa10.91□□□□□ -0.66
APOC1-202ENST00000588750 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
APOC1-202ENST00000588750 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
APOC1-202ENST00000588750 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
APOC1-202ENST00000588750 PKD1L3Q7Z443 1732 aa10.9□□□□□ -0.66
APOC1-202ENST00000588750 COL3A1P02461 1466 aaPredicted RBP10.9□□□□□ -0.66
APOC1-202ENST00000588750 WDR43Q15061 677 aaKnown RBP eCLIP10.9□□□□□ -0.66
APOC1-202ENST00000588750 GAS2L2Q8NHY3 880 aa10.9□□□□□ -0.66
APOC1-202ENST00000588750 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
APOC1-202ENST00000588750 TRIM37O94972 964 aa10.89□□□□□ -0.67
APOC1-202ENST00000588750 HMOX1P09601 288 aa10.88□□□□□ -0.67
APOC1-202ENST00000588750 FAM182BQ5T319 152 aa10.88□□□□□ -0.67
APOC1-202ENST00000588750 MAPK8IP3Q9UPT6 1336 aa10.87□□□□□ -0.67
APOC1-202ENST00000588750 APBA3O96018 575 aa10.87□□□□□ -0.67
APOC1-202ENST00000588750 PHKG2P15735 406 aa10.87□□□□□ -0.67
APOC1-202ENST00000588750 NKX1-1Q15270 411 aaPredicted RBP10.87□□□□□ -0.67
APOC1-202ENST00000588750 AKAP4Q5JQC9 854 aa10.87□□□□□ -0.67
APOC1-202ENST00000588750 ZNF530Q6P9A1 599 aaPredicted RBP10.87□□□□□ -0.67
APOC1-202ENST00000588750 AEBP1Q8IUX7 1158 aa10.87□□□□□ -0.67
APOC1-202ENST00000588750 DCAF5Q96JK2 942 aa10.87□□□□□ -0.67
APOC1-202ENST00000588750 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
APOC1-202ENST00000588750 PRKAR2BP31323 418 aa10.86□□□□□ -0.67
APOC1-202ENST00000588750 SYTL4Q96C24 671 aaPredicted RBP10.86□□□□□ -0.67
APOC1-202ENST00000588750 SBF2Q86WG5 1849 aa10.86□□□□□ -0.67
APOC1-202ENST00000588750 SHANK3Q9BYB0 1731 aa10.85□□□□□ -0.67
APOC1-202ENST00000588750 ERVV-2B6SEH9 535 aa10.85□□□□□ -0.67
APOC1-202ENST00000588750 PLSCR1O15162 318 aa10.85□□□□□ -0.67
APOC1-202ENST00000588750 CYP27B1O15528 508 aa10.85□□□□□ -0.67
APOC1-202ENST00000588750 RSPH6AQ9H0K4 717 aa10.85□□□□□ -0.67
APOC1-202ENST00000588750 ADRA2BP18089 450 aa10.84□□□□□ -0.67
APOC1-202ENST00000588750 PRIM1P49642 420 aaKnown RBP10.84□□□□□ -0.67
APOC1-202ENST00000588750 RTF1Q92541 710 aaKnown RBP10.84□□□□□ -0.67
APOC1-202ENST00000588750 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
APOC1-202ENST00000588750 ACSBG1Q96GR2 724 aa10.84□□□□□ -0.67
APOC1-202ENST00000588750 TMOD3Q9NYL9 352 aa10.84□□□□□ -0.67
APOC1-202ENST00000588750 RGPD3A6NKT7 1758 aaPredicted RBP10.84□□□□□ -0.67
APOC1-202ENST00000588750 RGPD4Q7Z3J3 1758 aa10.84□□□□□ -0.67
APOC1-202ENST00000588750 TNS1Q9HBL0 1735 aaKnown RBP10.84□□□□□ -0.67
APOC1-202ENST00000588750 KAT6BQ8WYB5 2073 aa10.83□□□□□ -0.68
APOC1-202ENST00000588750 GNAT3A8MTJ3 354 aa10.83□□□□□ -0.68
APOC1-202ENST00000588750 HTATSF1O43719 755 aaKnown RBP10.83□□□□□ -0.68
APOC1-202ENST00000588750 LMOD3Q0VAK6 560 aa10.83□□□□□ -0.68
APOC1-202ENST00000588750 DOT1LQ8TEK3 1739 aa10.83□□□□□ -0.68
APOC1-202ENST00000588750 MAP3K5Q99683 1374 aa10.82□□□□□ -0.68
APOC1-202ENST00000588750 CABP4P57796 275 aa10.82□□□□□ -0.68
APOC1-202ENST00000588750 MTHFSDQ2M296 383 aaKnown RBP10.82□□□□□ -0.68
APOC1-202ENST00000588750 NBPF14Q5TI25 921 aa10.82□□□□□ -0.68
APOC1-202ENST00000588750 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
APOC1-202ENST00000588750 EN1Q05925 392 aaPredicted RBP10.81□□□□□ -0.68
APOC1-202ENST00000588750 TEFQ10587 303 aa10.81□□□□□ -0.68
APOC1-202ENST00000588750 SLC27A3Q5K4L6 730 aa10.81□□□□□ -0.68
APOC1-202ENST00000588750 DIEXFQ68CQ4 756 aaKnown RBP10.81□□□□□ -0.68
APOC1-202ENST00000588750 MPRIPQ6WCQ1 1025 aa10.81□□□□□ -0.68
APOC1-202ENST00000588750 RUNDC1Q96C34 613 aa10.81□□□□□ -0.68
APOC1-202ENST00000588750 KCNQ2O43526 872 aa10.8□□□□□ -0.68
APOC1-202ENST00000588750 DEFB132Q7Z7B7 95 aa10.8□□□□□ -0.68
APOC1-202ENST00000588750 BTAF1O14981 1849 aa10.79□□□□□ -0.68
APOC1-202ENST00000588750 RNMTO43148 476 aaKnown RBP10.79□□□□□ -0.68
APOC1-202ENST00000588750 CAMKK2Q96RR4 588 aa10.79□□□□□ -0.68
APOC1-202ENST00000588750 ADAMTS8Q9UP79 889 aa10.79□□□□□ -0.68
APOC1-202ENST00000588750 SCN11AQ9UI33 1791 aa10.79□□□□□ -0.68
APOC1-202ENST00000588750 CCER2I3L3R5 266 aa10.78□□□□□ -0.68
APOC1-202ENST00000588750 NFE2L2Q16236 605 aa10.78□□□□□ -0.68
APOC1-202ENST00000588750 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
APOC1-202ENST00000588750 PHACTR3Q96KR7 559 aa10.78□□□□□ -0.68
APOC1-202ENST00000588750 PLEKHF1Q96S99 279 aa10.78□□□□□ -0.68
APOC1-202ENST00000588750 SLC52A2Q9HAB3 445 aa10.78□□□□□ -0.68
APOC1-202ENST00000588750 ITGB4P16144 1822 aa10.78□□□□□ -0.68
APOC1-202ENST00000588750 CALD1Q05682 793 aaKnown RBP10.77□□□□□ -0.69
APOC1-202ENST00000588750 EZH2Q15910 746 aaKnown RBP10.77□□□□□ -0.69
APOC1-202ENST00000588750 TXNRD1Q16881 649 aa10.77□□□□□ -0.69
APOC1-202ENST00000588750 TTC5Q8N0Z6 440 aa10.77□□□□□ -0.69
APOC1-202ENST00000588750 NFATC2IPQ8NCF5 419 aa10.77□□□□□ -0.69
APOC1-202ENST00000588750 PIGBQ92521 554 aa10.77□□□□□ -0.69
APOC1-202ENST00000588750 PALLDQ8WX93 1383 aa10.77□□□□□ -0.69
APOC1-202ENST00000588750 KDM6AO15550 1401 aaPredicted RBP10.76□□□□□ -0.69
APOC1-202ENST00000588750 TOGARAM1Q9Y4F4 1720 aa10.76□□□□□ -0.69
APOC1-202ENST00000588750 RIPK4P57078 832 aa10.76□□□□□ -0.69
APOC1-202ENST00000588750 CCNL1Q9UK58 526 aaPredicted RBP10.76□□□□□ -0.69
APOC1-202ENST00000588750 RREB1Q92766 1687 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms