RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 IL13P35225 146 aa13.97□□□□□ -0.17
BCAS3-220ENST00000588720 CHMP5Q9NZZ3 219 aa13.97□□□□□ -0.17
BCAS3-220ENST00000588720 HTATSF1O43719 755 aaKnown RBP13.97□□□□□ -0.17
BCAS3-220ENST00000588720 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
BCAS3-220ENST00000588720 ERC1Q8IUD2 1116 aa13.97□□□□□ -0.17
BCAS3-220ENST00000588720 UBE2Q2Q8WVN8 375 aa13.97□□□□□ -0.17
BCAS3-220ENST00000588720 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.17
BCAS3-220ENST00000588720 BCORL1Q5H9F3 1711 aa13.96□□□□□ -0.18
BCAS3-220ENST00000588720 DDX11L8A8MPP1 907 aa13.96□□□□□ -0.18
BCAS3-220ENST00000588720 SKAP1Q86WV1 359 aa13.96□□□□□ -0.18
BCAS3-220ENST00000588720 ANKRD24Q8TF21 1146 aa13.96□□□□□ -0.18
BCAS3-220ENST00000588720 PLEKHG1Q9ULL1 1385 aa13.95□□□□□ -0.18
BCAS3-220ENST00000588720 NPHP3Q7Z494 1330 aa13.95□□□□□ -0.18
BCAS3-220ENST00000588720 MSH6P52701 1360 aa13.95□□□□□ -0.18
BCAS3-220ENST00000588720 IGHDP01880 384 aa13.95□□□□□ -0.18
BCAS3-220ENST00000588720 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
BCAS3-220ENST00000588720 CNTROBQ8N137 903 aa13.95□□□□□ -0.18
BCAS3-220ENST00000588720 FLIIQ13045 1269 aa13.94□□□□□ -0.18
BCAS3-220ENST00000588720 SRGAP3O43295 1099 aa13.94□□□□□ -0.18
BCAS3-220ENST00000588720 MYL6BP14649 208 aa13.94□□□□□ -0.18
BCAS3-220ENST00000588720 EYA1Q99502 592 aa13.94□□□□□ -0.18
BCAS3-220ENST00000588720 TPM2P07951 284 aa13.93□□□□□ -0.18
BCAS3-220ENST00000588720 C8orf58Q8NAV2 365 aa13.93□□□□□ -0.18
BCAS3-220ENST00000588720 HSP90B1P14625 803 aaKnown RBP13.93□□□□□ -0.18
BCAS3-220ENST00000588720 CSPP1Q1MSJ5 1256 aa13.93□□□□□ -0.18
BCAS3-220ENST00000588720 MTHFSDQ2M296 383 aaKnown RBP13.93□□□□□ -0.18
BCAS3-220ENST00000588720 MADDQ8WXG6 1647 aa13.93□□□□□ -0.18
BCAS3-220ENST00000588720 F6X3S4 739 aa13.93□□□□□ -0.18
BCAS3-220ENST00000588720 VAMP4O75379 141 aa13.93□□□□□ -0.18
BCAS3-220ENST00000588720 DBF4Q9UBU7 674 aaPredicted RBP13.93□□□□□ -0.18
BCAS3-220ENST00000588720 NLRP1Q9C000 1473 aa13.93□□□□□ -0.18
BCAS3-220ENST00000588720 CALRP27797 417 aaKnown RBP13.93□□□□□ -0.18
BCAS3-220ENST00000588720 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
BCAS3-220ENST00000588720 A0A0U1RQG5 324 aaPredicted RBP13.92□□□□□ -0.18
BCAS3-220ENST00000588720 HDAC1Q13547 482 aaPredicted RBP13.92□□□□□ -0.18
BCAS3-220ENST00000588720 RNF20Q5VTR2 975 aa13.92□□□□□ -0.18
BCAS3-220ENST00000588720 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
BCAS3-220ENST00000588720 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
BCAS3-220ENST00000588720 ADGRB3O60242 1522 aa13.92□□□□□ -0.18
BCAS3-220ENST00000588720 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
BCAS3-220ENST00000588720 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
BCAS3-220ENST00000588720 SBNO1A3KN83 1393 aa13.92□□□□□ -0.18
BCAS3-220ENST00000588720 RRP9O43818 475 aaKnown RBP13.92□□□□□ -0.18
BCAS3-220ENST00000588720 SKOR2Q2VWA4 1001 aaPredicted RBP13.92□□□□□ -0.18
BCAS3-220ENST00000588720 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
BCAS3-220ENST00000588720 HOXC9P31274 260 aa13.91□□□□□ -0.18
BCAS3-220ENST00000588720 GCP02774 474 aa13.91□□□□□ -0.18
BCAS3-220ENST00000588720 KIF6Q6ZMV9 814 aa13.91□□□□□ -0.18
BCAS3-220ENST00000588720 FAM43AQ8N2R8 423 aa13.91□□□□□ -0.18
BCAS3-220ENST00000588720 PLCB2Q00722 1185 aa13.91□□□□□ -0.18
BCAS3-220ENST00000588720 NEUROD6Q96NK8 337 aa13.91□□□□□ -0.18
BCAS3-220ENST00000588720 IFNL2Q8IZJ0 200 aa13.9□□□□□ -0.18
BCAS3-220ENST00000588720 IP6K1Q92551 441 aa13.9□□□□□ -0.18
BCAS3-220ENST00000588720 KIF3AQ9Y496 699 aa13.9□□□□□ -0.18
BCAS3-220ENST00000588720 RLBP1P12271 317 aa13.9□□□□□ -0.18
BCAS3-220ENST00000588720 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.9□□□□□ -0.18
BCAS3-220ENST00000588720 EXOC6BQ9Y2D4 811 aa13.9□□□□□ -0.18
BCAS3-220ENST00000588720 A2ML1A8K2U0 1454 aa13.9□□□□□ -0.18
BCAS3-220ENST00000588720 ATP7BP35670 1465 aa13.9□□□□□ -0.18
BCAS3-220ENST00000588720 FAM135BQ49AJ0 1406 aa13.9□□□□□ -0.18
BCAS3-220ENST00000588720 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.18
BCAS3-220ENST00000588720 DNAAF4Q8WXU2 420 aa13.9□□□□□ -0.18
BCAS3-220ENST00000588720 RABEP1Q15276 862 aa13.9□□□□□ -0.19
BCAS3-220ENST00000588720 TSPYL6Q8N831 410 aa13.9□□□□□ -0.19
BCAS3-220ENST00000588720 LARP1Q6PKG0 1096 aaKnown RBP13.89□□□□□ -0.19
BCAS3-220ENST00000588720 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
BCAS3-220ENST00000588720 HYPKQ9NX55 129 aa13.89□□□□□ -0.19
BCAS3-220ENST00000588720 CEP152O94986 1710 aa13.89□□□□□ -0.19
BCAS3-220ENST00000588720 AKAP4Q5JQC9 854 aa13.89□□□□□ -0.19
BCAS3-220ENST00000588720 ARID3AQ99856 593 aa13.89□□□□□ -0.19
BCAS3-220ENST00000588720 GNL2Q13823 731 aaKnown RBP13.88□□□□□ -0.19
BCAS3-220ENST00000588720 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
BCAS3-220ENST00000588720 PIK3R4Q99570 1358 aa13.88□□□□□ -0.19
BCAS3-220ENST00000588720 NUCB2P80303 420 aa13.88□□□□□ -0.19
BCAS3-220ENST00000588720 MEX3CQ5U5Q3 659 aaKnown RBP13.88□□□□□ -0.19
BCAS3-220ENST00000588720 ATP6V1DQ9Y5K8 247 aa13.88□□□□□ -0.19
BCAS3-220ENST00000588720 PPRC1Q5VV67 1664 aaKnown RBP13.88□□□□□ -0.19
BCAS3-220ENST00000588720 HIP1O00291 1037 aa13.88□□□□□ -0.19
BCAS3-220ENST00000588720 CHRNA2Q15822 529 aa13.88□□□□□ -0.19
BCAS3-220ENST00000588720 FSD1Q9BTV5 496 aa13.88□□□□□ -0.19
BCAS3-220ENST00000588720 TNNQ9UQP3 1299 aa13.88□□□□□ -0.19
BCAS3-220ENST00000588720 KIDINS220Q9ULH0 1771 aa13.87□□□□□ -0.19
BCAS3-220ENST00000588720 ROBO2Q9HCK4 1378 aa13.87□□□□□ -0.19
BCAS3-220ENST00000588720 TMX4Q9H1E5 349 aaPredicted RBP13.87□□□□□ -0.19
BCAS3-220ENST00000588720 LAMC1P11047 1609 aa13.87□□□□□ -0.19
BCAS3-220ENST00000588720 RAB11FIP3O75154 756 aa13.87□□□□□ -0.19
BCAS3-220ENST00000588720 HSPA2P54652 639 aa13.87□□□□□ -0.19
BCAS3-220ENST00000588720 TAF3Q5VWG9 929 aa13.87□□□□□ -0.19
BCAS3-220ENST00000588720 KIF1BPQ96EK5 621 aa13.87□□□□□ -0.19
BCAS3-220ENST00000588720 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
BCAS3-220ENST00000588720 AATKQ6ZMQ8 1374 aa13.87□□□□□ -0.19
BCAS3-220ENST00000588720 FOXD4L5Q5VV16 416 aaPredicted RBP13.86□□□□□ -0.19
BCAS3-220ENST00000588720 FOXD4L4Q8WXT5 416 aaPredicted RBP13.86□□□□□ -0.19
BCAS3-220ENST00000588720 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
BCAS3-220ENST00000588720 MAP3K5Q99683 1374 aa13.86□□□□□ -0.19
BCAS3-220ENST00000588720 SETBP1Q9Y6X0 1596 aa13.86□□□□□ -0.19
BCAS3-220ENST00000588720 ZNF521Q96K83 1311 aa13.86□□□□□ -0.19
BCAS3-220ENST00000588720 LRRC59Q96AG4 307 aaKnown RBP13.86□□□□□ -0.19
BCAS3-220ENST00000588720 ORAI2Q96SN7 254 aa13.86□□□□□ -0.19
BCAS3-220ENST00000588720 LRRFIP2Q9Y608 721 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms