RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 GAS2L2Q8NHY3 880 aa29.76■■■□□ 2.36
ACTN4-210ENST00000588618 PKD1L3Q7Z443 1732 aa29.76■■■□□ 2.35
ACTN4-210ENST00000588618 IL2RBP14784 551 aa29.76■■■□□ 2.35
ACTN4-210ENST00000588618 VPS72Q15906 364 aa29.76■■■□□ 2.35
ACTN4-210ENST00000588618 AMOTQ4VCS5 1084 aa29.76■■■□□ 2.35
ACTN4-210ENST00000588618 PLEKHO1Q53GL0 409 aaPredicted RBP29.76■■■□□ 2.35
ACTN4-210ENST00000588618 SPATA31A1Q5TZJ5 1347 aa29.75■■■□□ 2.35
ACTN4-210ENST00000588618 TRIM35Q9UPQ4 493 aa29.75■■■□□ 2.35
ACTN4-210ENST00000588618 THRAP3Q9Y2W1 955 aaKnown RBP29.75■■■□□ 2.35
ACTN4-210ENST00000588618 SPATA31A5Q5VU36 1347 aa29.74■■■□□ 2.35
ACTN4-210ENST00000588618 SPATA31A7Q8IWB4 1347 aa29.74■■■□□ 2.35
ACTN4-210ENST00000588618 RIPK4P57078 832 aa29.74■■■□□ 2.35
ACTN4-210ENST00000588618 PLEKHG2Q9H7P9 1386 aa29.72■■■□□ 2.35
ACTN4-210ENST00000588618 WWC1Q8IX03 1113 aa29.72■■■□□ 2.35
ACTN4-210ENST00000588618 OVOS2A0A0G2JMS6 1433 aa29.72■■■□□ 2.35
ACTN4-210ENST00000588618 SHANK3Q9BYB0 1731 aa29.72■■■□□ 2.35
ACTN4-210ENST00000588618 DISP2A7MBM2 1401 aa29.71■■■□□ 2.35
ACTN4-210ENST00000588618 SPG7Q9UQ90 795 aa29.71■■■□□ 2.35
ACTN4-210ENST00000588618 CCDC27Q2M243 656 aa29.71■■■□□ 2.35
ACTN4-210ENST00000588618 NCBP3Q53F19 620 aaKnown RBP29.71■■■□□ 2.35
ACTN4-210ENST00000588618 TRPC5Q9UL62 973 aaPredicted RBP29.71■■■□□ 2.35
ACTN4-210ENST00000588618 LMOD3Q0VAK6 560 aa29.7■■■□□ 2.34
ACTN4-210ENST00000588618 CDCA7Q9BWT1 371 aaPredicted RBP29.69■■■□□ 2.34
ACTN4-210ENST00000588618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.69■■■□□ 2.34
ACTN4-210ENST00000588618 VIRMAQ69YN4 1812 aaKnown RBP29.69■■■□□ 2.34
ACTN4-210ENST00000588618 ZNF530Q6P9A1 599 aaPredicted RBP29.68■■■□□ 2.34
ACTN4-210ENST00000588618 C1orf141Q5JVX7 400 aa29.67■■■□□ 2.34
ACTN4-210ENST00000588618 ZNF772Q68DY9 489 aaPredicted RBP29.67■■■□□ 2.34
ACTN4-210ENST00000588618 RTF1Q92541 710 aaKnown RBP29.66■■■□□ 2.34
ACTN4-210ENST00000588618 BARGINQ6ZT62 677 aa29.65■■■□□ 2.34
ACTN4-210ENST00000588618 CDCA7LQ96GN5 454 aa29.65■■■□□ 2.34
ACTN4-210ENST00000588618 ZCRB1Q8TBF4 217 aaKnown RBP29.65■■■□□ 2.34
ACTN4-210ENST00000588618 DCTN1Q14203 1278 aa29.64■■■□□ 2.34
ACTN4-210ENST00000588618 GJD4Q96KN9 370 aaPredicted RBP29.64■■■□□ 2.34
ACTN4-210ENST00000588618 THUMPD2Q9BTF0 503 aaKnown RBP29.64■■■□□ 2.34
ACTN4-210ENST00000588618 QTRT2Q9H974 415 aaKnown RBP29.64■■■□□ 2.34
ACTN4-210ENST00000588618 SPINK5Q9NQ38 1064 aaPredicted RBP29.64■■■□□ 2.34
ACTN4-210ENST00000588618 ATRNO75882 1429 aa29.63■■■□□ 2.33
ACTN4-210ENST00000588618 GNAT3A8MTJ3 354 aa29.63■■■□□ 2.33
ACTN4-210ENST00000588618 GLI3P10071 1580 aa29.63■■■□□ 2.33
ACTN4-210ENST00000588618 MAP3K5Q99683 1374 aa29.63■■■□□ 2.33
ACTN4-210ENST00000588618 AKAP4Q5JQC9 854 aa29.62■■■□□ 2.33
ACTN4-210ENST00000588618 ILDR1Q86SU0 546 aaPredicted RBP29.62■■■□□ 2.33
ACTN4-210ENST00000588618 A0A0G2JS52 829 aa29.62■■■□□ 2.33
ACTN4-210ENST00000588618 MYT1Q01538 1121 aa29.62■■■□□ 2.33
ACTN4-210ENST00000588618 FAM98CQ17RN3 349 aaKnown RBP29.62■■■□□ 2.33
ACTN4-210ENST00000588618 PCDH11XQ9BZA7 1347 aa29.62■■■□□ 2.33
ACTN4-210ENST00000588618 PCDH11YQ9BZA8 1340 aa29.62■■■□□ 2.33
ACTN4-210ENST00000588618 LRRC37A3O60309 1634 aa29.61■■■□□ 2.33
ACTN4-210ENST00000588618 EXOC5O00471 708 aa29.6■■■□□ 2.33
ACTN4-210ENST00000588618 MCM10Q7L590 875 aa29.6■■■□□ 2.33
ACTN4-210ENST00000588618 CYP27B1O15528 508 aa29.59■■■□□ 2.33
ACTN4-210ENST00000588618 IFNL2Q8IZJ0 200 aa29.59■■■□□ 2.33
ACTN4-210ENST00000588618 ADAMTS7Q9UKP4 1686 aa29.59■■■□□ 2.33
ACTN4-210ENST00000588618 HTATSF1O43719 755 aaKnown RBP29.59■■■□□ 2.33
ACTN4-210ENST00000588618 CALD1Q05682 793 aaKnown RBP29.58■■■□□ 2.33
ACTN4-210ENST00000588618 GOLGA2Q08379 1002 aa29.58■■■□□ 2.33
ACTN4-210ENST00000588618 DDB1Q16531 1140 aa29.58■■■□□ 2.33
ACTN4-210ENST00000588618 WDR63Q8IWG1 891 aa29.58■■■□□ 2.33
ACTN4-210ENST00000588618 DDX54Q8TDD1 881 aaKnown RBP29.57■■■□□ 2.32
ACTN4-210ENST00000588618 SCN11AQ9UI33 1791 aa29.57■■■□□ 2.32
ACTN4-210ENST00000588618 PHKG2P15735 406 aa29.57■■■□□ 2.32
ACTN4-210ENST00000588618 PDE3BQ13370 1112 aa29.57■■■□□ 2.32
ACTN4-210ENST00000588618 IL17REQ8NFR9 667 aa29.57■■■□□ 2.32
ACTN4-210ENST00000588618 HSP90AB1P08238 724 aaKnown RBP29.56■■■□□ 2.32
ACTN4-210ENST00000588618 THSD7AQ9UPZ6 1657 aa29.54■■■□□ 2.32
ACTN4-210ENST00000588618 SLFN5Q08AF3 891 aa29.54■■■□□ 2.32
ACTN4-210ENST00000588618 TNS2Q63HR2 1409 aa29.54■■■□□ 2.32
ACTN4-210ENST00000588618 MPRIPQ6WCQ1 1025 aa29.54■■■□□ 2.32
ACTN4-210ENST00000588618 LGR6Q9HBX8 967 aa29.54■■■□□ 2.32
ACTN4-210ENST00000588618 KDM6AO15550 1401 aaPredicted RBP29.53■■■□□ 2.32
ACTN4-210ENST00000588618 CEMIPQ8WUJ3 1361 aa29.53■■■□□ 2.32
ACTN4-210ENST00000588618 TRMT2AQ8IZ69 625 aaKnown RBP29.52■■■□□ 2.32
ACTN4-210ENST00000588618 SIPA1L3O60292 1781 aaPredicted RBP29.5■■■□□ 2.31
ACTN4-210ENST00000588618 IL16Q14005 1332 aa29.5■■■□□ 2.31
ACTN4-210ENST00000588618 DUSP27Q5VZP5 1158 aa29.5■■■□□ 2.31
ACTN4-210ENST00000588618 RBM6P78332 1123 aaKnown RBP29.49■■■□□ 2.31
ACTN4-210ENST00000588618 DCAF5Q96JK2 942 aa29.49■■■□□ 2.31
ACTN4-210ENST00000588618 TOGARAM1Q9Y4F4 1720 aa29.49■■■□□ 2.31
ACTN4-210ENST00000588618 E9PSI1 815 aa29.48■■■□□ 2.31
ACTN4-210ENST00000588618 RNMTO43148 476 aaKnown RBP29.48■■■□□ 2.31
ACTN4-210ENST00000588618 CENPBP07199 599 aaPredicted RBP29.48■■■□□ 2.31
ACTN4-210ENST00000588618 ZNF853P0CG23 659 aa29.47■■■□□ 2.31
ACTN4-210ENST00000588618 TEFQ10587 303 aa29.47■■■□□ 2.31
ACTN4-210ENST00000588618 LAS1LQ9Y4W2 734 aaKnown RBP29.47■■■□□ 2.31
ACTN4-210ENST00000588618 TSR2Q969E8 191 aaKnown RBP29.45■■■□□ 2.31
ACTN4-210ENST00000588618 ONECUT3O60422 494 aaPredicted RBP29.45■■■□□ 2.3
ACTN4-210ENST00000588618 MYH16Q9H6N6 1097 aa29.45■■■□□ 2.3
ACTN4-210ENST00000588618 RXRBP28702 533 aa29.44■■■□□ 2.3
ACTN4-210ENST00000588618 NKX1-1Q15270 411 aaPredicted RBP29.44■■■□□ 2.3
ACTN4-210ENST00000588618 SEPT12Q8IYM1 358 aa29.44■■■□□ 2.3
ACTN4-210ENST00000588618 IFT57Q9NWB7 429 aa29.44■■■□□ 2.3
ACTN4-210ENST00000588618 RGS17Q9UGC6 210 aaPredicted RBP29.44■■■□□ 2.3
ACTN4-210ENST00000588618 FANCIQ9NVI1 1328 aa29.44■■■□□ 2.3
ACTN4-210ENST00000588618 GNAI1P63096 354 aa29.43■■■□□ 2.3
ACTN4-210ENST00000588618 MRC1P22897 1456 aa29.43■■■□□ 2.3
ACTN4-210ENST00000588618 CFAP44Q96MT7 982 aa29.42■■■□□ 2.3
ACTN4-210ENST00000588618 MIS18AQ9NYP9 233 aa29.41■■■□□ 2.3
ACTN4-210ENST00000588618 KDM3BQ7LBC6 1761 aa29.41■■■□□ 2.3
ACTN4-210ENST00000588618 MBIPQ9NS73 344 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms