RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 FAM173BQ6P4H8 233 aa12.43□□□□□ -0.42
LSM14A-206ENST00000588582 DNAJC25Q9H1X3 360 aa12.43□□□□□ -0.42
LSM14A-206ENST00000588582 ZDHHC9Q9Y397 364 aa12.43□□□□□ -0.42
LSM14A-206ENST00000588582 DENND4BO75064 1496 aaPredicted RBP12.43□□□□□ -0.42
LSM14A-206ENST00000588582 HMMRO75330 724 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 TTC31Q49AM3 519 aaPredicted RBP12.42□□□□□ -0.42
LSM14A-206ENST00000588582 HSP90B2PQ58FF3 399 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 CFAP70Q5T0N1 1121 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 RSPH4AQ5TD94 716 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 RGS22Q8NE09 1264 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 SRCIN1Q9C0H9 1055 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 H0YHG0 523 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 MCM6Q14566 821 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 ZCCHC17Q9NP64 241 aaKnown RBP12.42□□□□□ -0.42
LSM14A-206ENST00000588582 EXOC6BQ9Y2D4 811 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 RALGAPBQ86X10 1494 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 SETQ01105 290 aaPredicted RBP12.42□□□□□ -0.42
LSM14A-206ENST00000588582 STK3Q13188 491 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 SNW1Q13573 536 aaKnown RBP12.42□□□□□ -0.42
LSM14A-206ENST00000588582 EP400NLQ6ZTU2 488 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 TEX2Q8IWB9 1127 aa12.42□□□□□ -0.42
LSM14A-206ENST00000588582 FEZ2Q9UHY8 353 aaPredicted RBP12.42□□□□□ -0.42
LSM14A-206ENST00000588582 CAMSAP2Q08AD1 1489 aa12.41□□□□□ -0.42
LSM14A-206ENST00000588582 CAPN2P17655 700 aa12.41□□□□□ -0.42
LSM14A-206ENST00000588582 H3BQV1 296 aa12.41□□□□□ -0.42
LSM14A-206ENST00000588582 IFFO2Q5TF58 517 aa12.41□□□□□ -0.42
LSM14A-206ENST00000588582 SUPT6HQ7KZ85 1726 aaKnown RBP12.41□□□□□ -0.42
LSM14A-206ENST00000588582 KIF21AQ7Z4S6 1674 aa12.41□□□□□ -0.42
LSM14A-206ENST00000588582 CDK13Q14004 1512 aaKnown RBP12.41□□□□□ -0.42
LSM14A-206ENST00000588582 FAM200AQ8TCP9 573 aa12.41□□□□□ -0.42
LSM14A-206ENST00000588582 DNAI1Q9UI46 699 aa12.41□□□□□ -0.42
LSM14A-206ENST00000588582 EFCAB5A4FU69 1503 aa12.4□□□□□ -0.42
LSM14A-206ENST00000588582 STX6O43752 255 aa12.4□□□□□ -0.42
LSM14A-206ENST00000588582 GSPT1P15170 499 aaKnown RBP12.4□□□□□ -0.42
LSM14A-206ENST00000588582 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
LSM14A-206ENST00000588582 ANKRD7Q92527 254 aa12.4□□□□□ -0.42
LSM14A-206ENST00000588582 USP16Q9Y5T5 823 aa12.4□□□□□ -0.42
LSM14A-206ENST00000588582 TYRO3Q06418 890 aa12.4□□□□□ -0.42
LSM14A-206ENST00000588582 PLEKHM2Q8IWE5 1019 aa12.4□□□□□ -0.42
LSM14A-206ENST00000588582 BRD2P25440 801 aaKnown RBP12.39□□□□□ -0.43
LSM14A-206ENST00000588582 LARP1BQ659C4 914 aaKnown RBP12.39□□□□□ -0.43
LSM14A-206ENST00000588582 PDILTQ8N807 584 aa12.39□□□□□ -0.43
LSM14A-206ENST00000588582 KCNF1Q9H3M0 494 aa12.39□□□□□ -0.43
LSM14A-206ENST00000588582 DACT1Q9NYF0 836 aa12.39□□□□□ -0.43
LSM14A-206ENST00000588582 CASTP20810 708 aaKnown RBP12.39□□□□□ -0.43
LSM14A-206ENST00000588582 KRT85P78386 507 aa12.39□□□□□ -0.43
LSM14A-206ENST00000588582 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
LSM14A-206ENST00000588582 SEC31AO94979 1220 aaKnown RBP12.39□□□□□ -0.43
LSM14A-206ENST00000588582 MYCBPQ99417 103 aaPredicted RBP12.39□□□□□ -0.43
LSM14A-206ENST00000588582 SDF4Q9BRK5 362 aa12.39□□□□□ -0.43
LSM14A-206ENST00000588582 MYO1CO00159 1063 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 CPA1P15085 419 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
LSM14A-206ENST00000588582 MICALL1Q8N3F8 863 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 EHBP1L1Q8N3D4 1523 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 PPFIA3O75145 1194 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 BRD1O95696 1058 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 ARID5BQ14865 1188 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 ZSCAN25Q6NSZ9 544 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 CREBRFQ8IUR6 639 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 CNPY4Q8N129 248 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 ERO1AQ96HE7 468 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 API5Q9BZZ5 524 aaKnown RBP12.38□□□□□ -0.43
LSM14A-206ENST00000588582 RABEP2Q9H5N1 569 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 CCDC69A6NI79 296 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 OAS2P29728 719 aaKnown RBP12.38□□□□□ -0.43
LSM14A-206ENST00000588582 CENPHQ9H3R5 247 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 IL1RAPL2Q9NP60 686 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 VPS18Q9P253 973 aa12.38□□□□□ -0.43
LSM14A-206ENST00000588582 FAM193AP78312 1265 aa12.37□□□□□ -0.43
LSM14A-206ENST00000588582 DHX8Q14562 1220 aaKnown RBP12.37□□□□□ -0.43
LSM14A-206ENST00000588582 SF3A1Q15459 793 aaKnown RBP12.37□□□□□ -0.43
LSM14A-206ENST00000588582 SPTLC3Q9NUV7 552 aa12.37□□□□□ -0.43
LSM14A-206ENST00000588582 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
LSM14A-206ENST00000588582 CASQ1P31415 396 aa12.37□□□□□ -0.43
LSM14A-206ENST00000588582 ISM2Q6H9L7 571 aa12.37□□□□□ -0.43
LSM14A-206ENST00000588582 HOMEZQ8IX15 550 aa12.37□□□□□ -0.43
LSM14A-206ENST00000588582 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
LSM14A-206ENST00000588582 TDO2P48775 406 aa12.37□□□□□ -0.43
LSM14A-206ENST00000588582 TWISTNBQ3B726 338 aaPredicted RBP12.37□□□□□ -0.43
LSM14A-206ENST00000588582 NECAB1Q8N987 351 aa12.37□□□□□ -0.43
LSM14A-206ENST00000588582 MORC2Q9Y6X9 1032 aaPredicted RBP12.37□□□□□ -0.43
LSM14A-206ENST00000588582 CLGNO14967 610 aa12.36□□□□□ -0.43
LSM14A-206ENST00000588582 CACTINQ8WUQ7 758 aaKnown RBP12.36□□□□□ -0.43
LSM14A-206ENST00000588582 A0A1B0GUL7 405 aa12.36□□□□□ -0.43
LSM14A-206ENST00000588582 SLC26A8Q96RN1 970 aa12.36□□□□□ -0.43
LSM14A-206ENST00000588582 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
LSM14A-206ENST00000588582 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
LSM14A-206ENST00000588582 TMEM132EQ6IEE7 984 aa12.36□□□□□ -0.43
LSM14A-206ENST00000588582 CARD14Q9BXL6 1004 aa12.35□□□□□ -0.43
LSM14A-206ENST00000588582 CBX8Q9HC52 389 aa12.35□□□□□ -0.43
LSM14A-206ENST00000588582 JRKLQ9Y4A0 524 aa12.35□□□□□ -0.43
LSM14A-206ENST00000588582 A0A087WWV3 80 aa12.35□□□□□ -0.43
LSM14A-206ENST00000588582 SFPQP23246 707 aaKnown RBP eCLIP12.35□□□□□ -0.43
LSM14A-206ENST00000588582 GJB2P29033 226 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms