RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 PHRF1Q9P1Y6 1649 aaKnown RBP10.86□□□□□ -0.67
GPATCH8-206ENST00000588554 CAMTA1Q9Y6Y1 1673 aa10.85□□□□□ -0.67
GPATCH8-206ENST00000588554 GCP02774 474 aa10.85□□□□□ -0.67
GPATCH8-206ENST00000588554 MICALL2Q8IY33 904 aa10.85□□□□□ -0.67
GPATCH8-206ENST00000588554 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
GPATCH8-206ENST00000588554 TRIM37O94972 964 aa10.84□□□□□ -0.67
GPATCH8-206ENST00000588554 EZH2Q15910 746 aaKnown RBP10.84□□□□□ -0.67
GPATCH8-206ENST00000588554 THSD7AQ9UPZ6 1657 aa10.83□□□□□ -0.68
GPATCH8-206ENST00000588554 BAG6P46379 1132 aa10.83□□□□□ -0.68
GPATCH8-206ENST00000588554 NLRP13Q86W25 1043 aa10.83□□□□□ -0.68
GPATCH8-206ENST00000588554 SSH2Q76I76 1423 aa10.83□□□□□ -0.68
GPATCH8-206ENST00000588554 USP19O94966 1318 aa10.83□□□□□ -0.68
GPATCH8-206ENST00000588554 QRICH2Q9H0J4 1663 aa10.82□□□□□ -0.68
GPATCH8-206ENST00000588554 NRKQ7Z2Y5 1582 aa10.82□□□□□ -0.68
GPATCH8-206ENST00000588554 R3HDM1Q15032 1099 aaKnown RBP10.81□□□□□ -0.68
GPATCH8-206ENST00000588554 AXIN2Q9Y2T1 843 aa10.81□□□□□ -0.68
GPATCH8-206ENST00000588554 CPDO75976 1380 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 SRCAPQ6ZRS2 3230 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 APBA3O96018 575 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 PDE3BQ13370 1112 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 FAM196AQ6ZSG2 479 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 BARGINQ6ZT62 677 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 TCP11L2Q8N4U5 519 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 CAMKK2Q96RR4 588 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 USP6P35125 1406 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 EVC2Q86UK5 1308 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 TRPM1Q7Z4N2 1603 aa10.8□□□□□ -0.68
GPATCH8-206ENST00000588554 LMO7Q8WWI1 1683 aa10.79□□□□□ -0.68
GPATCH8-206ENST00000588554 ROCK2O75116 1388 aaKnown RBP10.79□□□□□ -0.68
GPATCH8-206ENST00000588554 ST18O60284 1047 aa10.79□□□□□ -0.68
GPATCH8-206ENST00000588554 PTF1AQ7RTS3 328 aa10.78□□□□□ -0.68
GPATCH8-206ENST00000588554 COL5A2P05997 1499 aaPredicted RBP10.78□□□□□ -0.68
GPATCH8-206ENST00000588554 TTC21BQ7Z4L5 1316 aa10.78□□□□□ -0.68
GPATCH8-206ENST00000588554 RGPD1P0DJD0 1748 aa10.78□□□□□ -0.68
GPATCH8-206ENST00000588554 TNS1Q9HBL0 1735 aaKnown RBP10.78□□□□□ -0.68
GPATCH8-206ENST00000588554 PIK3C2AO00443 1686 aa10.76□□□□□ -0.69
GPATCH8-206ENST00000588554 TOM1L2Q6ZVM7 507 aa10.76□□□□□ -0.69
GPATCH8-206ENST00000588554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.76□□□□□ -0.69
GPATCH8-206ENST00000588554 AATKQ6ZMQ8 1374 aa10.76□□□□□ -0.69
GPATCH8-206ENST00000588554 CRB1P82279 1406 aa10.75□□□□□ -0.69
GPATCH8-206ENST00000588554 SLIT3O75094 1523 aa10.75□□□□□ -0.69
GPATCH8-206ENST00000588554 ARHGEF25Q86VW2 580 aa10.75□□□□□ -0.69
GPATCH8-206ENST00000588554 CARD11Q9BXL7 1154 aa10.75□□□□□ -0.69
GPATCH8-206ENST00000588554 KTN1Q86UP2 1357 aaKnown RBP10.75□□□□□ -0.69
GPATCH8-206ENST00000588554 NME9Q86XW9 330 aa10.74□□□□□ -0.69
GPATCH8-206ENST00000588554 TMC1Q8TDI8 760 aa10.74□□□□□ -0.69
GPATCH8-206ENST00000588554 SLC12A5Q9H2X9 1139 aa10.74□□□□□ -0.69
GPATCH8-206ENST00000588554 THRAP3Q9Y2W1 955 aaKnown RBP10.74□□□□□ -0.69
GPATCH8-206ENST00000588554 COL18A1P39060 1754 aa10.74□□□□□ -0.69
GPATCH8-206ENST00000588554 BRD4O60885 1362 aaPredicted RBP10.74□□□□□ -0.69
GPATCH8-206ENST00000588554 DISP2A7MBM2 1401 aa10.74□□□□□ -0.69
GPATCH8-206ENST00000588554 CPSF1Q10570 1443 aaKnown RBP10.74□□□□□ -0.69
GPATCH8-206ENST00000588554 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
GPATCH8-206ENST00000588554 MARCH10Q8NA82 808 aaPredicted RBP10.73□□□□□ -0.69
GPATCH8-206ENST00000588554 CSB-PGBD3P0DP91 1061 aa10.72□□□□□ -0.69
GPATCH8-206ENST00000588554 DDB1Q16531 1140 aa10.72□□□□□ -0.69
GPATCH8-206ENST00000588554 TMEM92Q6UXU6 159 aa10.72□□□□□ -0.69
GPATCH8-206ENST00000588554 WDR17Q8IZU2 1322 aa10.72□□□□□ -0.69
GPATCH8-206ENST00000588554 RGPD5Q99666 1765 aa10.72□□□□□ -0.69
GPATCH8-206ENST00000588554 LRP5O75197 1615 aa10.71□□□□□ -0.69
GPATCH8-206ENST00000588554 AKAP12Q02952 1782 aa10.71□□□□□ -0.69
GPATCH8-206ENST00000588554 KCNH5Q8NCM2 988 aa10.71□□□□□ -0.69
GPATCH8-206ENST00000588554 CD163L1Q9NR16 1453 aa10.71□□□□□ -0.69
GPATCH8-206ENST00000588554 PARP4Q9UKK3 1724 aaKnown RBP10.7□□□□□ -0.7
GPATCH8-206ENST00000588554 TTC21AQ8NDW8 1320 aa10.7□□□□□ -0.7
GPATCH8-206ENST00000588554 FBLN1P23142 703 aa10.7□□□□□ -0.7
GPATCH8-206ENST00000588554 DOK7Q18PE1 504 aa10.7□□□□□ -0.7
GPATCH8-206ENST00000588554 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
GPATCH8-206ENST00000588554 RYDENQ9NUL5 291 aaKnown RBP10.7□□□□□ -0.7
GPATCH8-206ENST00000588554 PEAK1Q9H792 1746 aa10.7□□□□□ -0.7
GPATCH8-206ENST00000588554 LRRC37A3O60309 1634 aa10.69□□□□□ -0.7
GPATCH8-206ENST00000588554 TONSLQ96HA7 1378 aa10.69□□□□□ -0.7
GPATCH8-206ENST00000588554 SBNO2Q9Y2G9 1366 aa10.69□□□□□ -0.7
GPATCH8-206ENST00000588554 KCNQ2O43526 872 aa10.69□□□□□ -0.7
GPATCH8-206ENST00000588554 CARD10Q9BWT7 1032 aa10.69□□□□□ -0.7
GPATCH8-206ENST00000588554 PDGFDQ9GZP0 370 aaPredicted RBP10.69□□□□□ -0.7
GPATCH8-206ENST00000588554 NFAT5O94916 1531 aa10.68□□□□□ -0.7
GPATCH8-206ENST00000588554 NUP188Q5SRE5 1749 aa10.68□□□□□ -0.7
GPATCH8-206ENST00000588554 ST20-MTHFSA0A0A6YYL1 179 aa10.68□□□□□ -0.7
GPATCH8-206ENST00000588554 EXOC5O00471 708 aa10.68□□□□□ -0.7
GPATCH8-206ENST00000588554 PPP1R37O75864 691 aa10.68□□□□□ -0.7
GPATCH8-206ENST00000588554 NBPF14Q5TI25 921 aa10.68□□□□□ -0.7
GPATCH8-206ENST00000588554 ZNF710Q8N1W2 664 aa10.68□□□□□ -0.7
GPATCH8-206ENST00000588554 OVOS2A0A0G2JMS6 1433 aa10.67□□□□□ -0.7
GPATCH8-206ENST00000588554 OVOS2A0A0J9YW53 1432 aa10.67□□□□□ -0.7
GPATCH8-206ENST00000588554 OVOS2Q6IE36 1432 aa10.67□□□□□ -0.7
GPATCH8-206ENST00000588554 PARD3Q8TEW0 1356 aa10.67□□□□□ -0.7
GPATCH8-206ENST00000588554 RREB1Q92766 1687 aa10.67□□□□□ -0.7
GPATCH8-206ENST00000588554 TESK2Q96S53 571 aa10.67□□□□□ -0.7
GPATCH8-206ENST00000588554 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
GPATCH8-206ENST00000588554 NLRP2Q9NX02 1062 aa10.67□□□□□ -0.7
GPATCH8-206ENST00000588554 A0A1W2PP64 1363 aa10.66□□□□□ -0.7
GPATCH8-206ENST00000588554 USP31Q70CQ4 1352 aa10.66□□□□□ -0.7
GPATCH8-206ENST00000588554 RIMBP2O15034 1052 aa10.66□□□□□ -0.7
GPATCH8-206ENST00000588554 PLSCR1O15162 318 aa10.66□□□□□ -0.7
GPATCH8-206ENST00000588554 HOXB3P14651 431 aaPredicted RBP10.66□□□□□ -0.7
GPATCH8-206ENST00000588554 NKX1-1Q15270 411 aaPredicted RBP10.66□□□□□ -0.7
GPATCH8-206ENST00000588554 HDGFL2Q7Z4V5 671 aaPredicted RBP10.66□□□□□ -0.7
GPATCH8-206ENST00000588554 ANKRD24Q8TF21 1146 aa10.66□□□□□ -0.7
GPATCH8-206ENST00000588554 ACSBG1Q96GR2 724 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms