RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
ZNF554-202ENST00000588534 ARHGEF25Q86VW2 580 aa9.36□□□□□ -0.91
ZNF554-202ENST00000588534 TAF7LQ5H9L4 462 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 CENPQQ7L2Z9 268 aaPredicted RBP9.35□□□□□ -0.91
ZNF554-202ENST00000588534 RSPH6AQ9H0K4 717 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 C1orf167Q5SNV9 1468 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 KIF6Q6ZMV9 814 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 USHBP1Q8N6Y0 703 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 CABLES1Q8TDN4 633 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.91
ZNF554-202ENST00000588534 C3P01024 1663 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 CPSF1Q10570 1443 aaKnown RBP9.35□□□□□ -0.91
ZNF554-202ENST00000588534 DCAF5Q96JK2 942 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 FMNL2Q96PY5 1086 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 CPS1P31327 1500 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 PCDH11XQ9BZA7 1347 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 PCDH11YQ9BZA8 1340 aa9.35□□□□□ -0.91
ZNF554-202ENST00000588534 SMARCC1Q92922 1105 aaPredicted RBP9.34□□□□□ -0.91
ZNF554-202ENST00000588534 PTPRUQ92729 1446 aa9.34□□□□□ -0.91
ZNF554-202ENST00000588534 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
ZNF554-202ENST00000588534 IQGAP1P46940 1657 aa9.34□□□□□ -0.91
ZNF554-202ENST00000588534 CDC42BPGQ6DT37 1551 aa9.34□□□□□ -0.91
ZNF554-202ENST00000588534 DDB1Q16531 1140 aa9.34□□□□□ -0.92
ZNF554-202ENST00000588534 B4GALNT3Q6L9W6 998 aa9.34□□□□□ -0.92
ZNF554-202ENST00000588534 MCM10Q7L590 875 aa9.34□□□□□ -0.92
ZNF554-202ENST00000588534 TSR2Q969E8 191 aaKnown RBP9.34□□□□□ -0.92
ZNF554-202ENST00000588534 MAP3K5Q99683 1374 aa9.33□□□□□ -0.92
ZNF554-202ENST00000588534 SLC4A2P04920 1241 aa9.33□□□□□ -0.92
ZNF554-202ENST00000588534 DUSP27Q5VZP5 1158 aa9.33□□□□□ -0.92
ZNF554-202ENST00000588534 BTG4Q9NY30 223 aa9.33□□□□□ -0.92
ZNF554-202ENST00000588534 CDK12Q9NYV4 1490 aaPredicted RBP9.33□□□□□ -0.92
ZNF554-202ENST00000588534 FBLN1P23142 703 aa9.33□□□□□ -0.92
ZNF554-202ENST00000588534 ATF7IPQ6VMQ6 1270 aa9.33□□□□□ -0.92
ZNF554-202ENST00000588534 TCERG1O14776 1098 aaKnown RBP9.33□□□□□ -0.92
ZNF554-202ENST00000588534 C8orf37Q96NL8 207 aa9.33□□□□□ -0.92
ZNF554-202ENST00000588534 COG6Q9Y2V7 657 aa9.33□□□□□ -0.92
ZNF554-202ENST00000588534 FANCIQ9NVI1 1328 aa9.32□□□□□ -0.92
ZNF554-202ENST00000588534 BLMP54132 1417 aaPredicted RBP9.32□□□□□ -0.92
ZNF554-202ENST00000588534 TNS3Q68CZ2 1445 aa9.32□□□□□ -0.92
ZNF554-202ENST00000588534 UBR1Q8IWV7 1749 aa9.32□□□□□ -0.92
ZNF554-202ENST00000588534 MPRIPQ6WCQ1 1025 aa9.32□□□□□ -0.92
ZNF554-202ENST00000588534 HYPKQ9NX55 129 aa9.32□□□□□ -0.92
ZNF554-202ENST00000588534 DBF4Q9UBU7 674 aaPredicted RBP9.32□□□□□ -0.92
ZNF554-202ENST00000588534 MTHFSDQ2M296 383 aaKnown RBP9.32□□□□□ -0.92
ZNF554-202ENST00000588534 PTPRCP08575 1304 aa9.32□□□□□ -0.92
ZNF554-202ENST00000588534 CERKQ8TCT0 537 aa9.31□□□□□ -0.92
ZNF554-202ENST00000588534 CRBNQ96SW2 442 aa9.31□□□□□ -0.92
ZNF554-202ENST00000588534 HOXB7P09629 217 aa9.31□□□□□ -0.92
ZNF554-202ENST00000588534 SNRPA1P09661 255 aaKnown RBP9.31□□□□□ -0.92
ZNF554-202ENST00000588534 UBTFL1P0CB47 393 aaPredicted RBP9.31□□□□□ -0.92
ZNF554-202ENST00000588534 AEBP1Q8IUX7 1158 aa9.31□□□□□ -0.92
ZNF554-202ENST00000588534 CARD10Q9BWT7 1032 aa9.31□□□□□ -0.92
ZNF554-202ENST00000588534 ARHGAP45Q92619 1136 aa9.31□□□□□ -0.92
ZNF554-202ENST00000588534 ADAMTSL3P82987 1691 aa9.3□□□□□ -0.92
ZNF554-202ENST00000588534 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
ZNF554-202ENST00000588534 NECTIN2Q92692 538 aa9.3□□□□□ -0.92
ZNF554-202ENST00000588534 SRCIN1Q9C0H9 1055 aa9.3□□□□□ -0.92
ZNF554-202ENST00000588534 CHMP3Q9Y3E7 222 aa9.3□□□□□ -0.92
ZNF554-202ENST00000588534 RGS3P49796 1198 aa9.3□□□□□ -0.92
ZNF554-202ENST00000588534 RARSP54136 660 aaKnown RBP9.3□□□□□ -0.92
ZNF554-202ENST00000588534 DDRGK1Q96HY6 314 aa9.3□□□□□ -0.92
ZNF554-202ENST00000588534 NOB1Q9ULX3 412 aaKnown RBP9.3□□□□□ -0.92
ZNF554-202ENST00000588534 IGSF1Q8N6C5 1336 aa9.3□□□□□ -0.92
ZNF554-202ENST00000588534 PLIN1O60240 522 aa9.29□□□□□ -0.92
ZNF554-202ENST00000588534 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
ZNF554-202ENST00000588534 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
ZNF554-202ENST00000588534 ZNF652Q9Y2D9 606 aa9.29□□□□□ -0.92
ZNF554-202ENST00000588534 DCTN1Q14203 1278 aa9.29□□□□□ -0.92
ZNF554-202ENST00000588534 GORABQ5T7V8 394 aa9.29□□□□□ -0.92
ZNF554-202ENST00000588534 THRAP3Q9Y2W1 955 aaKnown RBP9.29□□□□□ -0.92
ZNF554-202ENST00000588534 WDR17Q8IZU2 1322 aa9.29□□□□□ -0.92
ZNF554-202ENST00000588534 A0A087WZG4 1122 aa9.29□□□□□ -0.92
ZNF554-202ENST00000588534 HSP90AA1P07900 732 aaKnown RBP9.29□□□□□ -0.92
ZNF554-202ENST00000588534 LRRFIP1Q32MZ4 808 aaKnown RBP9.29□□□□□ -0.92
ZNF554-202ENST00000588534 EXOC6Q8TAG9 804 aa9.29□□□□□ -0.92
ZNF554-202ENST00000588534 THUMPD2Q9BTF0 503 aaKnown RBP9.29□□□□□ -0.92
ZNF554-202ENST00000588534 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
ZNF554-202ENST00000588534 KIAA0232Q92628 1395 aa9.28□□□□□ -0.92
ZNF554-202ENST00000588534 RNMTO43148 476 aaKnown RBP9.28□□□□□ -0.92
ZNF554-202ENST00000588534 AIMP1Q12904 312 aaKnown RBP9.28□□□□□ -0.92
ZNF554-202ENST00000588534 BECN1Q14457 450 aa9.28□□□□□ -0.92
ZNF554-202ENST00000588534 NBPF6Q5VWK0 638 aa9.28□□□□□ -0.92
ZNF554-202ENST00000588534 DDX17Q92841 729 aaKnown RBP9.28□□□□□ -0.92
ZNF554-202ENST00000588534 NBPF4Q96M43 638 aa9.28□□□□□ -0.92
ZNF554-202ENST00000588534 GNAI2P04899 355 aa9.28□□□□□ -0.92
ZNF554-202ENST00000588534 SIGLEC1Q9BZZ2 1709 aa9.28□□□□□ -0.92
ZNF554-202ENST00000588534 G3BP1Q13283 466 aaKnown RBP eCLIP9.28□□□□□ -0.92
ZNF554-202ENST00000588534 ERVV-2B6SEH9 535 aa9.28□□□□□ -0.92
ZNF554-202ENST00000588534 MCCP23508 829 aa9.28□□□□□ -0.92
ZNF554-202ENST00000588534 MVPQ14764 893 aaKnown RBP9.28□□□□□ -0.92
ZNF554-202ENST00000588534 PHACTR3Q96KR7 559 aa9.28□□□□□ -0.92
ZNF554-202ENST00000588534 JCADQ9P266 1359 aa9.27□□□□□ -0.93
ZNF554-202ENST00000588534 ERBB3P21860 1342 aa9.27□□□□□ -0.93
ZNF554-202ENST00000588534 ERC1Q8IUD2 1116 aa9.27□□□□□ -0.93
ZNF554-202ENST00000588534 USP21Q9UK80 565 aa9.27□□□□□ -0.93
ZNF554-202ENST00000588534 PNPLA6Q8IY17 1366 aa9.27□□□□□ -0.93
ZNF554-202ENST00000588534 RPAP2Q8IXW5 612 aaPredicted RBP9.27□□□□□ -0.93
ZNF554-202ENST00000588534 SSH1Q8WYL5 1049 aa9.27□□□□□ -0.93
ZNF554-202ENST00000588534 TRPC5Q9UL62 973 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms