RNA–Protein interactions for RNA: ENST00000588491.1

TNPO2-212, Transcript of transportin 2, humanhuman

TSL 5

Gene TNPO2, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-212ENST00000588491 RGPD2P0DJD1 1756 aa22.54■■□□□ 1.2
TNPO2-212ENST00000588491 ST20-MTHFSA0A0A6YYL1 179 aa22.54■■□□□ 1.2
TNPO2-212ENST00000588491 ZCRB1Q8TBF4 217 aaKnown RBP22.54■■□□□ 1.2
TNPO2-212ENST00000588491 PNPLA7Q6ZV29 1317 aa22.53■■□□□ 1.2
TNPO2-212ENST00000588491 FBLN1P23142 703 aa22.52■■□□□ 1.2
TNPO2-212ENST00000588491 KCNQ4P56696 695 aa22.52■■□□□ 1.2
TNPO2-212ENST00000588491 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.2
TNPO2-212ENST00000588491 TESK2Q96S53 571 aa22.52■■□□□ 1.2
TNPO2-212ENST00000588491 TUBGCP6Q96RT7 1819 aa22.51■■□□□ 1.19
TNPO2-212ENST00000588491 LY75O60449 1722 aa22.51■■□□□ 1.19
TNPO2-212ENST00000588491 MEGF6O75095 1541 aa22.5■■□□□ 1.19
TNPO2-212ENST00000588491 RTL1A6NKG5 1358 aa22.5■■□□□ 1.19
TNPO2-212ENST00000588491 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
TNPO2-212ENST00000588491 SHANK3Q9BYB0 1731 aa22.49■■□□□ 1.19
TNPO2-212ENST00000588491 CCNL1Q9UK58 526 aaPredicted RBP22.49■■□□□ 1.19
TNPO2-212ENST00000588491 MSH5O43196 834 aa22.48■■□□□ 1.19
TNPO2-212ENST00000588491 RRS1Q15050 365 aaKnown RBP22.48■■□□□ 1.19
TNPO2-212ENST00000588491 USP47Q96K76 1375 aa22.48■■□□□ 1.19
TNPO2-212ENST00000588491 RAPGEF4Q8WZA2 1011 aa22.47■■□□□ 1.19
TNPO2-212ENST00000588491 NSD2O96028 1365 aa22.47■■□□□ 1.19
TNPO2-212ENST00000588491 COL24A1Q17RW2 1714 aa22.46■■□□□ 1.19
TNPO2-212ENST00000588491 USHBP1Q8N6Y0 703 aa22.46■■□□□ 1.19
TNPO2-212ENST00000588491 CGNL1Q0VF96 1302 aa22.46■■□□□ 1.19
TNPO2-212ENST00000588491 NBPF6Q5VWK0 638 aa22.45■■□□□ 1.18
TNPO2-212ENST00000588491 NBPF4Q96M43 638 aa22.45■■□□□ 1.18
TNPO2-212ENST00000588491 GGNBP2Q9H3C7 697 aa22.45■■□□□ 1.18
TNPO2-212ENST00000588491 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
TNPO2-212ENST00000588491 TATP17735 454 aaPredicted RBP22.44■■□□□ 1.18
TNPO2-212ENST00000588491 TMF1P82094 1093 aa22.44■■□□□ 1.18
TNPO2-212ENST00000588491 C1QTNF8P60827 252 aa22.43■■□□□ 1.18
TNPO2-212ENST00000588491 FYB1O15117 783 aa22.42■■□□□ 1.18
TNPO2-212ENST00000588491 NLGN2Q8NFZ4 835 aa22.42■■□□□ 1.18
TNPO2-212ENST00000588491 PCDH11XQ9BZA7 1347 aa22.4■■□□□ 1.18
TNPO2-212ENST00000588491 PCDH11YQ9BZA8 1340 aa22.4■■□□□ 1.18
TNPO2-212ENST00000588491 HMGB2P26583 209 aaKnown RBP22.4■■□□□ 1.18
TNPO2-212ENST00000588491 COL23A1Q86Y22 540 aaPredicted RBP22.4■■□□□ 1.18
TNPO2-212ENST00000588491 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
TNPO2-212ENST00000588491 GOLGB1Q14789 3259 aaKnown RBP22.38■■□□□ 1.17
TNPO2-212ENST00000588491 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
TNPO2-212ENST00000588491 MSL1Q68DK7 614 aa22.38■■□□□ 1.17
TNPO2-212ENST00000588491 C5P01031 1676 aa22.38■■□□□ 1.17
TNPO2-212ENST00000588491 INSRP06213 1382 aa22.38■■□□□ 1.17
TNPO2-212ENST00000588491 FLT4P35916 1363 aa22.38■■□□□ 1.17
TNPO2-212ENST00000588491 GRIN3BO60391 1043 aa22.37■■□□□ 1.17
TNPO2-212ENST00000588491 CDCA8Q53HL2 280 aa22.37■■□□□ 1.17
TNPO2-212ENST00000588491 HSP90AB2PQ58FF8 381 aa22.37■■□□□ 1.17
TNPO2-212ENST00000588491 MPRIPQ6WCQ1 1025 aa22.36■■□□□ 1.17
TNPO2-212ENST00000588491 FLAD1Q8NFF5 587 aa22.35■■□□□ 1.17
TNPO2-212ENST00000588491 PALLDQ8WX93 1383 aa22.35■■□□□ 1.17
TNPO2-212ENST00000588491 KIF24Q5T7B8 1368 aa22.34■■□□□ 1.17
TNPO2-212ENST00000588491 TAF1LQ8IZX4 1826 aa22.33■■□□□ 1.16
TNPO2-212ENST00000588491 YBX3P16989 372 aaKnown RBP eCLIP22.32■■□□□ 1.167e-12■■■□□ 16.2
TNPO2-212ENST00000588491 SMARCC1Q92922 1105 aaPredicted RBP22.31■■□□□ 1.16
TNPO2-212ENST00000588491 AK7Q96M32 723 aa22.31■■□□□ 1.16
TNPO2-212ENST00000588491 ITGB4P16144 1822 aa22.3■■□□□ 1.16
TNPO2-212ENST00000588491 PPM1GO15355 546 aaPredicted RBP22.29■■□□□ 1.16
TNPO2-212ENST00000588491 CYP27B1O15528 508 aa22.29■■□□□ 1.16
TNPO2-212ENST00000588491 TOGARAM1Q9Y4F4 1720 aa22.28■■□□□ 1.16
TNPO2-212ENST00000588491 CD2APQ9Y5K6 639 aa22.28■■□□□ 1.16
TNPO2-212ENST00000588491 EMILIN1Q9Y6C2 1016 aa22.28■■□□□ 1.16
TNPO2-212ENST00000588491 NSD3Q9BZ95 1437 aa22.28■■□□□ 1.16
TNPO2-212ENST00000588491 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
TNPO2-212ENST00000588491 PKD1L3Q7Z443 1732 aa22.27■■□□□ 1.16
TNPO2-212ENST00000588491 PHF14O94880 888 aa22.26■■□□□ 1.15
TNPO2-212ENST00000588491 SPG7Q9UQ90 795 aa22.26■■□□□ 1.15
TNPO2-212ENST00000588491 CARD14Q9BXL6 1004 aa22.24■■□□□ 1.15
TNPO2-212ENST00000588491 PIGBQ92521 554 aa22.23■■□□□ 1.15
TNPO2-212ENST00000588491 UBR3Q6ZT12 1888 aa22.22■■□□□ 1.15
TNPO2-212ENST00000588491 ATP10DQ9P241 1426 aa22.22■■□□□ 1.15
TNPO2-212ENST00000588491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.21■■□□□ 1.15
TNPO2-212ENST00000588491 NKX1-1Q15270 411 aaPredicted RBP22.21■■□□□ 1.15
TNPO2-212ENST00000588491 TMOD3Q9NYL9 352 aa22.21■■□□□ 1.15
TNPO2-212ENST00000588491 MAP2P11137 1827 aaKnown RBP22.21■■□□□ 1.15
TNPO2-212ENST00000588491 LOC102724428A0A0B4J2F2 783 aa22.2■■□□□ 1.14
TNPO2-212ENST00000588491 SIK1P57059 783 aa22.2■■□□□ 1.14
TNPO2-212ENST00000588491 ANKRD26Q9UPS8 1709 aa22.2■■□□□ 1.14
TNPO2-212ENST00000588491 SSFA2P28290 1259 aa22.19■■□□□ 1.14
TNPO2-212ENST00000588491 GPBP1L1Q9HC44 474 aaPredicted RBP22.19■■□□□ 1.14
TNPO2-212ENST00000588491 WASHC2AQ641Q2 1341 aa22.19■■□□□ 1.14
TNPO2-212ENST00000588491 NCAPD2Q15021 1401 aa22.19■■□□□ 1.14
TNPO2-212ENST00000588491 IGSF1Q8N6C5 1336 aa22.18■■□□□ 1.14
TNPO2-212ENST00000588491 SMIM5Q71RC9 77 aa22.18■■□□□ 1.14
TNPO2-212ENST00000588491 AMIGO3Q86WK7 504 aa22.18■■□□□ 1.14
TNPO2-212ENST00000588491 EYA1Q99502 592 aa22.18■■□□□ 1.14
TNPO2-212ENST00000588491 IFNL2Q8IZJ0 200 aa22.17■■□□□ 1.14
TNPO2-212ENST00000588491 LINC00116Q8NCU8 138 aa22.17■■□□□ 1.14
TNPO2-212ENST00000588491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.17■■□□□ 1.14
TNPO2-212ENST00000588491 WWC3Q9ULE0 1092 aa22.17■■□□□ 1.14
TNPO2-212ENST00000588491 ATP6V1AP38606 617 aa22.16■■□□□ 1.14
TNPO2-212ENST00000588491 POLR3GLQ9BT43 218 aa22.16■■□□□ 1.14
TNPO2-212ENST00000588491 GNPATO15228 680 aa22.15■■□□□ 1.14
TNPO2-212ENST00000588491 ZNF526Q8TF50 670 aaPredicted RBP22.15■■□□□ 1.14
TNPO2-212ENST00000588491 PHKG2P15735 406 aa22.14■■□□□ 1.13
TNPO2-212ENST00000588491 ASAP1Q9ULH1 1129 aa22.14■■□□□ 1.13
TNPO2-212ENST00000588491 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
TNPO2-212ENST00000588491 POLKQ9UBT6 870 aa22.13■■□□□ 1.13
TNPO2-212ENST00000588491 TNNT2P45379 298 aaPredicted RBP22.12■■□□□ 1.13
TNPO2-212ENST00000588491 ITPK1Q13572 414 aa22.12■■□□□ 1.13
TNPO2-212ENST00000588491 ADCY9O60503 1353 aa22.11■■□□□ 1.13
TNPO2-212ENST00000588491 ATG3Q9NT62 314 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms