RNA–Protein interactions for RNA: ENST00000588362.1

BLOC1S3-203, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

TSL 3

Gene BLOC1S3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-203ENST00000588362 RTL1A6NKG5 1358 aa9.44□□□□□ -0.9
BLOC1S3-203ENST00000588362 SLIT3O75094 1523 aa9.44□□□□□ -0.9
BLOC1S3-203ENST00000588362 TNS1Q9HBL0 1735 aaKnown RBP9.44□□□□□ -0.9
BLOC1S3-203ENST00000588362 USP54Q70EL1 1684 aa9.43□□□□□ -0.9
BLOC1S3-203ENST00000588362 NFAT5O94916 1531 aa9.43□□□□□ -0.9
BLOC1S3-203ENST00000588362 PSDA5PKW4 1024 aaPredicted RBP9.43□□□□□ -0.9
BLOC1S3-203ENST00000588362 E9PSI1 815 aa9.43□□□□□ -0.9
BLOC1S3-203ENST00000588362 NBPF6Q5VWK0 638 aa9.43□□□□□ -0.9
BLOC1S3-203ENST00000588362 LTV1Q96GA3 475 aaPredicted RBP9.43□□□□□ -0.9
BLOC1S3-203ENST00000588362 NBPF4Q96M43 638 aa9.43□□□□□ -0.9
BLOC1S3-203ENST00000588362 MAP2P11137 1827 aaKnown RBP9.42□□□□□ -0.9
BLOC1S3-203ENST00000588362 PHRF1Q9P1Y6 1649 aaKnown RBP9.42□□□□□ -0.9
BLOC1S3-203ENST00000588362 A0A0G2JS52 829 aa9.42□□□□□ -0.9
BLOC1S3-203ENST00000588362 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
BLOC1S3-203ENST00000588362 NEFMP07197 916 aa9.42□□□□□ -0.9
BLOC1S3-203ENST00000588362 MYT1Q01538 1121 aa9.42□□□□□ -0.9
BLOC1S3-203ENST00000588362 RGPD1P0DJD0 1748 aa9.42□□□□□ -0.9
BLOC1S3-203ENST00000588362 PEAK1Q9H792 1746 aa9.42□□□□□ -0.9
BLOC1S3-203ENST00000588362 KDRP35968 1356 aa9.41□□□□□ -0.9
BLOC1S3-203ENST00000588362 RNF123Q5XPI4 1314 aa9.41□□□□□ -0.9
BLOC1S3-203ENST00000588362 ANKRD24Q8TF21 1146 aa9.41□□□□□ -0.9
BLOC1S3-203ENST00000588362 CPDO75976 1380 aa9.4□□□□□ -0.9
BLOC1S3-203ENST00000588362 IL16Q14005 1332 aa9.4□□□□□ -0.9
BLOC1S3-203ENST00000588362 SPATA31A5Q5VU36 1347 aa9.4□□□□□ -0.9
BLOC1S3-203ENST00000588362 SPATA31A7Q8IWB4 1347 aa9.4□□□□□ -0.9
BLOC1S3-203ENST00000588362 EN1Q05925 392 aaPredicted RBP9.4□□□□□ -0.9
BLOC1S3-203ENST00000588362 SF3B2Q13435 895 aaKnown RBP9.4□□□□□ -0.9
BLOC1S3-203ENST00000588362 MTHFSDQ2M296 383 aaKnown RBP9.4□□□□□ -0.9
BLOC1S3-203ENST00000588362 KIAA0232Q92628 1395 aa9.39□□□□□ -0.91
BLOC1S3-203ENST00000588362 CHRNA2Q15822 529 aa9.39□□□□□ -0.91
BLOC1S3-203ENST00000588362 RCAN3Q9UKA8 241 aa9.39□□□□□ -0.91
BLOC1S3-203ENST00000588362 ZNF853P0CG23 659 aa9.38□□□□□ -0.91
BLOC1S3-203ENST00000588362 USHBP1Q8N6Y0 703 aa9.38□□□□□ -0.91
BLOC1S3-203ENST00000588362 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
BLOC1S3-203ENST00000588362 BAG6P46379 1132 aa9.37□□□□□ -0.91
BLOC1S3-203ENST00000588362 LMOD3Q0VAK6 560 aa9.37□□□□□ -0.91
BLOC1S3-203ENST00000588362 R3HDM1Q15032 1099 aaKnown RBP9.37□□□□□ -0.91
BLOC1S3-203ENST00000588362 GAS2L2Q8NHY3 880 aa9.37□□□□□ -0.91
BLOC1S3-203ENST00000588362 MYH16Q9H6N6 1097 aa9.37□□□□□ -0.91
BLOC1S3-203ENST00000588362 PRDM11Q9NQV5 511 aa9.37□□□□□ -0.91
BLOC1S3-203ENST00000588362 DISP2A7MBM2 1401 aa9.37□□□□□ -0.91
BLOC1S3-203ENST00000588362 ERBB3P21860 1342 aa9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 SPATA31A1Q5TZJ5 1347 aa9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 LMO7Q8WWI1 1683 aa9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 DCTN1Q14203 1278 aa9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 FKBP8Q14318 412 aa9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 EZH2Q15910 746 aaKnown RBP9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 THUMPD2Q9BTF0 503 aaKnown RBP9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 STRN4Q9NRL3 753 aa9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 RREB1Q92766 1687 aa9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 CAMTA1Q9Y6Y1 1673 aa9.36□□□□□ -0.91
BLOC1S3-203ENST00000588362 TRIM37O94972 964 aa9.35□□□□□ -0.91
BLOC1S3-203ENST00000588362 CALD1Q05682 793 aaKnown RBP9.35□□□□□ -0.91
BLOC1S3-203ENST00000588362 NCAPD2Q15021 1401 aa9.35□□□□□ -0.91
BLOC1S3-203ENST00000588362 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
BLOC1S3-203ENST00000588362 NUP188Q5SRE5 1749 aa9.35□□□□□ -0.91
BLOC1S3-203ENST00000588362 CFAP44Q96MT7 982 aa9.35□□□□□ -0.91
BLOC1S3-203ENST00000588362 IFT57Q9NWB7 429 aa9.35□□□□□ -0.91
BLOC1S3-203ENST00000588362 NLRP2Q9NX02 1062 aa9.35□□□□□ -0.91
BLOC1S3-203ENST00000588362 CHL1O00533 1208 aa9.34□□□□□ -0.91
BLOC1S3-203ENST00000588362 GNAI1P63096 354 aa9.34□□□□□ -0.91
BLOC1S3-203ENST00000588362 EXOSC9Q06265 439 aaKnown RBP9.34□□□□□ -0.91
BLOC1S3-203ENST00000588362 AMOTQ4VCS5 1084 aa9.34□□□□□ -0.91
BLOC1S3-203ENST00000588362 IL17REQ8NFR9 667 aa9.34□□□□□ -0.91
BLOC1S3-203ENST00000588362 CAMKK2Q96RR4 588 aa9.34□□□□□ -0.91
BLOC1S3-203ENST00000588362 USP35Q9P2H5 1018 aa9.34□□□□□ -0.91
BLOC1S3-203ENST00000588362 FANCIQ9NVI1 1328 aa9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 GNAT3A8MTJ3 354 aa9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 NEFLP07196 543 aa9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 CT47B1P0C2W7 299 aaPredicted RBP9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 CSB-PGBD3P0DP91 1061 aa9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 RRP1P56182 461 aaKnown RBP9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 MCM10Q7L590 875 aa9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 TSR2Q969E8 191 aaKnown RBP9.33□□□□□ -0.92
BLOC1S3-203ENST00000588362 RARSP54136 660 aaKnown RBP9.32□□□□□ -0.92
BLOC1S3-203ENST00000588362 EVA1CP58658 441 aa9.32□□□□□ -0.92
BLOC1S3-203ENST00000588362 AKAP4Q5JQC9 854 aa9.32□□□□□ -0.92
BLOC1S3-203ENST00000588362 RTF1Q92541 710 aaKnown RBP9.32□□□□□ -0.92
BLOC1S3-203ENST00000588362 CARD10Q9BWT7 1032 aa9.32□□□□□ -0.92
BLOC1S3-203ENST00000588362 MBIPQ9NS73 344 aa9.32□□□□□ -0.92
BLOC1S3-203ENST00000588362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.32□□□□□ -0.92
BLOC1S3-203ENST00000588362 LAS1LQ9Y4W2 734 aaKnown RBP9.32□□□□□ -0.92
BLOC1S3-203ENST00000588362 WDR17Q8IZU2 1322 aa9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 CRB1P82279 1406 aa9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 VAMP4O75379 141 aa9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 BCAR3O75815 825 aa9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 TATP17735 454 aaPredicted RBP9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 IRX6P78412 446 aaPredicted RBP9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 LGR6Q9HBX8 967 aa9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 COL18A1P39060 1754 aa9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 PARP4Q9UKK3 1724 aaKnown RBP9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 ABCC6O95255 1503 aa9.31□□□□□ -0.92
BLOC1S3-203ENST00000588362 COL5A2P05997 1499 aaPredicted RBP9.3□□□□□ -0.92
BLOC1S3-203ENST00000588362 PLIN1O60240 522 aa9.3□□□□□ -0.92
BLOC1S3-203ENST00000588362 APBA3O96018 575 aa9.3□□□□□ -0.92
BLOC1S3-203ENST00000588362 TAF7Q15545 349 aaPredicted RBP9.3□□□□□ -0.92
BLOC1S3-203ENST00000588362 ZNF530Q6P9A1 599 aaPredicted RBP9.3□□□□□ -0.92
BLOC1S3-203ENST00000588362 FAM196AQ6ZSG2 479 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms