RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 POLR3GLQ9BT43 218 aa23.54■■□□□ 1.36
TMED1-203ENST00000588259 MTFR1LQ9H019 292 aa23.54■■□□□ 1.36
TMED1-203ENST00000588259 YY1P25490 414 aa23.53■■□□□ 1.36
TMED1-203ENST00000588259 PTGER2P43116 358 aa23.53■■□□□ 1.36
TMED1-203ENST00000588259 ZNF827Q17R98 1081 aa23.53■■□□□ 1.36
TMED1-203ENST00000588259 NBPF6Q5VWK0 638 aa23.53■■□□□ 1.36
TMED1-203ENST00000588259 NBPF4Q96M43 638 aa23.53■■□□□ 1.36
TMED1-203ENST00000588259 LRRC4BQ9NT99 713 aa23.52■■□□□ 1.36
TMED1-203ENST00000588259 FLT4P35916 1363 aa23.52■■□□□ 1.36
TMED1-203ENST00000588259 HSP90AB2PQ58FF8 381 aa23.51■■□□□ 1.35
TMED1-203ENST00000588259 TIMELESSQ9UNS1 1208 aa23.51■■□□□ 1.35
TMED1-203ENST00000588259 TATP17735 454 aaPredicted RBP23.5■■□□□ 1.35
TMED1-203ENST00000588259 SLC27A3Q5K4L6 730 aa23.5■■□□□ 1.35
TMED1-203ENST00000588259 INSRP06213 1382 aa23.5■■□□□ 1.35
TMED1-203ENST00000588259 PPM1GO15355 546 aaPredicted RBP23.49■■□□□ 1.35
TMED1-203ENST00000588259 KCNQ4P56696 695 aa23.49■■□□□ 1.35
TMED1-203ENST00000588259 CARD14Q9BXL6 1004 aa23.49■■□□□ 1.35
TMED1-203ENST00000588259 FHDC1Q9C0D6 1143 aaPredicted RBP23.48■■□□□ 1.35
TMED1-203ENST00000588259 CGNL1Q0VF96 1302 aa23.48■■□□□ 1.35
TMED1-203ENST00000588259 CLSPNQ9HAW4 1339 aa23.48■■□□□ 1.35
TMED1-203ENST00000588259 LY75O60449 1722 aa23.47■■□□□ 1.35
TMED1-203ENST00000588259 NSD2O96028 1365 aa23.46■■□□□ 1.35
TMED1-203ENST00000588259 KIF24Q5T7B8 1368 aa23.46■■□□□ 1.35
TMED1-203ENST00000588259 TFCP2L1Q9NZI6 479 aa23.46■■□□□ 1.35
TMED1-203ENST00000588259 EMILIN1Q9Y6C2 1016 aa23.46■■□□□ 1.35
TMED1-203ENST00000588259 TUBGCP6Q96RT7 1819 aa23.45■■□□□ 1.34
TMED1-203ENST00000588259 ARXQ96QS3 562 aa23.45■■□□□ 1.34
TMED1-203ENST00000588259 QSER1Q2KHR3 1735 aa23.45■■□□□ 1.34
TMED1-203ENST00000588259 PCDH11XQ9BZA7 1347 aa23.44■■□□□ 1.34
TMED1-203ENST00000588259 PCDH11YQ9BZA8 1340 aa23.44■■□□□ 1.34
TMED1-203ENST00000588259 AKT1S1Q96B36 256 aa23.44■■□□□ 1.34
TMED1-203ENST00000588259 CCNL1Q9UK58 526 aaPredicted RBP23.44■■□□□ 1.34
TMED1-203ENST00000588259 KLHL34Q8N239 644 aa23.43■■□□□ 1.34
TMED1-203ENST00000588259 SYT17Q9BSW7 474 aa23.43■■□□□ 1.34
TMED1-203ENST00000588259 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
TMED1-203ENST00000588259 SGIP1Q9BQI5 828 aa23.42■■□□□ 1.34
TMED1-203ENST00000588259 ANKRD26Q9UPS8 1709 aa23.41■■□□□ 1.34
TMED1-203ENST00000588259 PNPLA7Q6ZV29 1317 aa23.4■■□□□ 1.34
TMED1-203ENST00000588259 MSH5O43196 834 aa23.4■■□□□ 1.34
TMED1-203ENST00000588259 POLD1P28340 1107 aa23.39■■□□□ 1.33
TMED1-203ENST00000588259 TNNT2P45379 298 aaPredicted RBP23.38■■□□□ 1.33
TMED1-203ENST00000588259 CCER1Q8TC90 406 aaPredicted RBP23.38■■□□□ 1.33
TMED1-203ENST00000588259 SLC16A10Q8TF71 515 aa23.38■■□□□ 1.33
TMED1-203ENST00000588259 PKD1L3Q7Z443 1732 aa23.38■■□□□ 1.33
TMED1-203ENST00000588259 MPRIPQ6WCQ1 1025 aa23.37■■□□□ 1.33
TMED1-203ENST00000588259 C5P01031 1676 aa23.36■■□□□ 1.33
TMED1-203ENST00000588259 EIF4G2P78344 907 aaKnown RBP eCLIP23.36■■□□□ 1.33
TMED1-203ENST00000588259 TOGARAM1Q9Y4F4 1720 aa23.36■■□□□ 1.33
TMED1-203ENST00000588259 ITGB4P16144 1822 aa23.36■■□□□ 1.33
TMED1-203ENST00000588259 CYP27B1O15528 508 aa23.35■■□□□ 1.33
TMED1-203ENST00000588259 HSPA5P11021 654 aaKnown RBP23.34■■□□□ 1.33
TMED1-203ENST00000588259 PALLDQ8WX93 1383 aa23.34■■□□□ 1.33
TMED1-203ENST00000588259 SPG7Q9UQ90 795 aa23.33■■□□□ 1.33
TMED1-203ENST00000588259 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.32
TMED1-203ENST00000588259 MAP3K5Q99683 1374 aa23.32■■□□□ 1.32
TMED1-203ENST00000588259 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
TMED1-203ENST00000588259 EYA1Q99502 592 aa23.31■■□□□ 1.32
TMED1-203ENST00000588259 POLKQ9UBT6 870 aa23.31■■□□□ 1.32
TMED1-203ENST00000588259 CHD4Q14839 1912 aa23.31■■□□□ 1.32
TMED1-203ENST00000588259 TAF1LQ8IZX4 1826 aa23.31■■□□□ 1.32
TMED1-203ENST00000588259 NCAPD2Q15021 1401 aa23.3■■□□□ 1.32
TMED1-203ENST00000588259 COL24A1Q17RW2 1714 aa23.3■■□□□ 1.32
TMED1-203ENST00000588259 GPR162Q16538 588 aa23.29■■□□□ 1.32
TMED1-203ENST00000588259 MSL1Q68DK7 614 aa23.29■■□□□ 1.32
TMED1-203ENST00000588259 COL23A1Q86Y22 540 aaPredicted RBP23.28■■□□□ 1.32
TMED1-203ENST00000588259 SMARCC1Q92922 1105 aaPredicted RBP23.28■■□□□ 1.32
TMED1-203ENST00000588259 PANK3Q9H999 370 aa23.28■■□□□ 1.32
TMED1-203ENST00000588259 HMGB2P26583 209 aaKnown RBP23.26■■□□□ 1.31
TMED1-203ENST00000588259 EIF4A2Q14240 407 aaKnown RBP23.26■■□□□ 1.31
TMED1-203ENST00000588259 C4BP0C0L5 1744 aa23.25■■□□□ 1.31
TMED1-203ENST00000588259 PIGBQ92521 554 aa23.25■■□□□ 1.31
TMED1-203ENST00000588259 AK7Q96M32 723 aa23.25■■□□□ 1.31
TMED1-203ENST00000588259 TMOD3Q9NYL9 352 aa23.25■■□□□ 1.31
TMED1-203ENST00000588259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.23■■□□□ 1.31
TMED1-203ENST00000588259 PHF14O94880 888 aa23.22■■□□□ 1.31
TMED1-203ENST00000588259 NKX1-1Q15270 411 aaPredicted RBP23.22■■□□□ 1.31
TMED1-203ENST00000588259 IFNL2Q8IZJ0 200 aa23.22■■□□□ 1.31
TMED1-203ENST00000588259 FLAD1Q8NFF5 587 aa23.22■■□□□ 1.31
TMED1-203ENST00000588259 NLGN2Q8NFZ4 835 aa23.22■■□□□ 1.31
TMED1-203ENST00000588259 PHKG2P15735 406 aa23.21■■□□□ 1.31
TMED1-203ENST00000588259 MORC1Q86VD1 984 aa23.2■■□□□ 1.3
TMED1-203ENST00000588259 ZNF784Q8NCA9 323 aaPredicted RBP23.2■■□□□ 1.3
TMED1-203ENST00000588259 UBR3Q6ZT12 1888 aa23.19■■□□□ 1.3
TMED1-203ENST00000588259 LOC102724428A0A0B4J2F2 783 aa23.19■■□□□ 1.3
TMED1-203ENST00000588259 SIK1P57059 783 aa23.19■■□□□ 1.3
TMED1-203ENST00000588259 ASAP1Q9ULH1 1129 aa23.18■■□□□ 1.3
TMED1-203ENST00000588259 IGSF1Q8N6C5 1336 aa23.17■■□□□ 1.3
TMED1-203ENST00000588259 KNSTRNQ9Y448 316 aa23.17■■□□□ 1.3
TMED1-203ENST00000588259 UTRNP46939 3433 aa23.17■■□□□ 1.3
TMED1-203ENST00000588259 SMIM5Q71RC9 77 aa23.16■■□□□ 1.3
TMED1-203ENST00000588259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.15■■□□□ 1.3
TMED1-203ENST00000588259 LINC00116Q8NCU8 138 aa23.15■■□□□ 1.3
TMED1-203ENST00000588259 ATP6V1AP38606 617 aa23.14■■□□□ 1.29
TMED1-203ENST00000588259 PLEKHO1Q53GL0 409 aaPredicted RBP23.14■■□□□ 1.29
TMED1-203ENST00000588259 ZNF530Q6P9A1 599 aaPredicted RBP23.14■■□□□ 1.29
TMED1-203ENST00000588259 AMIGO3Q86WK7 504 aa23.14■■□□□ 1.29
TMED1-203ENST00000588259 GNPATO15228 680 aa23.13■■□□□ 1.29
TMED1-203ENST00000588259 HSP90AB1P08238 724 aaKnown RBP23.12■■□□□ 1.29
TMED1-203ENST00000588259 ATG3Q9NT62 314 aa23.12■■□□□ 1.29
TMED1-203ENST00000588259 PLEKHG2Q9H7P9 1386 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms