RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 EFCAB6Q5THR3 1501 aa20.5■□□□□ 0.87
SSC5D-203ENST00000588254 A0A0U1RQG5 324 aaPredicted RBP20.5■□□□□ 0.87
SSC5D-203ENST00000588254 ZNF500O60304 480 aaPredicted RBP20.5■□□□□ 0.87
SSC5D-203ENST00000588254 CLEC17AQ6ZS10 378 aa20.5■□□□□ 0.87
SSC5D-203ENST00000588254 COL3A1P02461 1466 aaPredicted RBP20.5■□□□□ 0.87
SSC5D-203ENST00000588254 CCDC39Q9UFE4 941 aa20.5■□□□□ 0.87
SSC5D-203ENST00000588254 MSH6P52701 1360 aa20.49■□□□□ 0.87
SSC5D-203ENST00000588254 ERC2O15083 957 aa20.49■□□□□ 0.87
SSC5D-203ENST00000588254 REC8O95072 547 aa20.49■□□□□ 0.87
SSC5D-203ENST00000588254 IBTKQ9P2D0 1353 aaPredicted RBP20.49■□□□□ 0.87
SSC5D-203ENST00000588254 TSPY26PQ9H489 355 aa20.48■□□□□ 0.87
SSC5D-203ENST00000588254 IFT57Q9NWB7 429 aa20.48■□□□□ 0.87
SSC5D-203ENST00000588254 CBX1P83916 185 aa20.48■□□□□ 0.87
SSC5D-203ENST00000588254 MED14O60244 1454 aa20.48■□□□□ 0.87
SSC5D-203ENST00000588254 NRXN1Q9ULB1 1477 aa20.48■□□□□ 0.87
SSC5D-203ENST00000588254 GLI2P10070 1586 aa20.48■□□□□ 0.87
SSC5D-203ENST00000588254 CWC22Q9HCG8 908 aaKnown RBP20.47■□□□□ 0.87
SSC5D-203ENST00000588254 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
SSC5D-203ENST00000588254 ARHGAP45Q92619 1136 aa20.47■□□□□ 0.87
SSC5D-203ENST00000588254 DEPDC5O75140 1603 aa20.47■□□□□ 0.87
SSC5D-203ENST00000588254 MROH1Q8NDA8 1641 aa20.47■□□□□ 0.87
SSC5D-203ENST00000588254 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
SSC5D-203ENST00000588254 ANKRD44Q8N8A2 993 aa20.47■□□□□ 0.87
SSC5D-203ENST00000588254 MYO3AQ8NEV4 1616 aa20.46■□□□□ 0.87
SSC5D-203ENST00000588254 IGSF3O75054 1194 aa20.46■□□□□ 0.87
SSC5D-203ENST00000588254 CFAP44Q96MT7 982 aa20.46■□□□□ 0.87
SSC5D-203ENST00000588254 KIAA2012Q0VF49 1180 aa20.46■□□□□ 0.87
SSC5D-203ENST00000588254 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
SSC5D-203ENST00000588254 SASS6Q6UVJ0 657 aa20.45■□□□□ 0.86
SSC5D-203ENST00000588254 ADGRB3O60242 1522 aa20.45■□□□□ 0.86
SSC5D-203ENST00000588254 G2E3Q7L622 706 aa20.45■□□□□ 0.86
SSC5D-203ENST00000588254 PRDM4Q9UKN5 801 aa20.45■□□□□ 0.86
SSC5D-203ENST00000588254 PTCH1Q13635 1447 aa20.44■□□□□ 0.86
SSC5D-203ENST00000588254 SULT6B1Q6IMI4 303 aa20.44■□□□□ 0.86
SSC5D-203ENST00000588254 DDX54Q8TDD1 881 aaKnown RBP20.44■□□□□ 0.86
SSC5D-203ENST00000588254 SPC24Q8NBT2 197 aa20.44■□□□□ 0.86
SSC5D-203ENST00000588254 FBXO31Q5XUX0 539 aaPredicted RBP20.43■□□□□ 0.86
SSC5D-203ENST00000588254 SPDYE4A6NLX3 237 aa20.43■□□□□ 0.86
SSC5D-203ENST00000588254 CSPP1Q1MSJ5 1256 aa20.43■□□□□ 0.86
SSC5D-203ENST00000588254 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
SSC5D-203ENST00000588254 USP48Q86UV5 1035 aa20.43■□□□□ 0.86
SSC5D-203ENST00000588254 IL1RAPL2Q9NP60 686 aa20.43■□□□□ 0.86
SSC5D-203ENST00000588254 VWDEQ8N2E2 1590 aa20.43■□□□□ 0.86
SSC5D-203ENST00000588254 FIBPO43427 364 aa20.42■□□□□ 0.86
SSC5D-203ENST00000588254 PDE1AP54750 535 aa20.42■□□□□ 0.86
SSC5D-203ENST00000588254 CAMSAP1Q5T5Y3 1602 aa20.42■□□□□ 0.86
SSC5D-203ENST00000588254 FAM135BQ49AJ0 1406 aa20.42■□□□□ 0.86
SSC5D-203ENST00000588254 HS1BP3Q53T59 392 aa20.41■□□□□ 0.86
SSC5D-203ENST00000588254 ZNF428Q96B54 188 aa20.41■□□□□ 0.86
SSC5D-203ENST00000588254 CNPY2Q9Y2B0 182 aa20.41■□□□□ 0.86
SSC5D-203ENST00000588254 IFT172Q9UG01 1749 aa20.41■□□□□ 0.86
SSC5D-203ENST00000588254 IL13P35225 146 aa20.41■□□□□ 0.86
SSC5D-203ENST00000588254 UNC5CLQ8IV45 518 aa20.41■□□□□ 0.86
SSC5D-203ENST00000588254 DYNC1I1O14576 645 aa20.4■□□□□ 0.86
SSC5D-203ENST00000588254 CPA1P15085 419 aa20.4■□□□□ 0.86
SSC5D-203ENST00000588254 ZC3H13Q5T200 1668 aaKnown RBP20.4■□□□□ 0.86
SSC5D-203ENST00000588254 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
SSC5D-203ENST00000588254 MBD3O95983 291 aa20.4■□□□□ 0.86
SSC5D-203ENST00000588254 IL25Q9H293 177 aa20.4■□□□□ 0.86
SSC5D-203ENST00000588254 ADCY5O95622 1261 aa20.4■□□□□ 0.86
SSC5D-203ENST00000588254 ZNF853P0CG23 659 aa20.4■□□□□ 0.86
SSC5D-203ENST00000588254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.39■□□□□ 0.85
SSC5D-203ENST00000588254 FOXO3O43524 673 aa20.39■□□□□ 0.85
SSC5D-203ENST00000588254 RTL1A6NKG5 1358 aa20.39■□□□□ 0.85
SSC5D-203ENST00000588254 INO80Q9ULG1 1556 aaPredicted RBP20.38■□□□□ 0.85
SSC5D-203ENST00000588254 RPGRIP1LQ68CZ1 1315 aa20.38■□□□□ 0.85
SSC5D-203ENST00000588254 KNDC1Q76NI1 1749 aa20.38■□□□□ 0.85
SSC5D-203ENST00000588254 BRD1O95696 1058 aa20.38■□□□□ 0.85
SSC5D-203ENST00000588254 BRPF1P55201 1214 aaPredicted RBP20.38■□□□□ 0.85
SSC5D-203ENST00000588254 GIMAP6Q6P9H5 292 aa20.38■□□□□ 0.85
SSC5D-203ENST00000588254 RPAP2Q8IXW5 612 aaPredicted RBP20.38■□□□□ 0.85
SSC5D-203ENST00000588254 YTHDC2Q9H6S0 1430 aaKnown RBP20.37■□□□□ 0.85
SSC5D-203ENST00000588254 ATP10DQ9P241 1426 aa20.37■□□□□ 0.85
SSC5D-203ENST00000588254 PIK3R4Q99570 1358 aa20.37■□□□□ 0.85
SSC5D-203ENST00000588254 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
SSC5D-203ENST00000588254 RIMS2Q9UQ26 1411 aa20.37■□□□□ 0.85
SSC5D-203ENST00000588254 NUTM1Q86Y26 1132 aa20.37■□□□□ 0.85
SSC5D-203ENST00000588254 MAP7D2Q96T17 732 aa20.37■□□□□ 0.85
SSC5D-203ENST00000588254 ESYT1Q9BSJ8 1104 aa20.36■□□□□ 0.85
SSC5D-203ENST00000588254 PNPLA6Q8IY17 1366 aa20.36■□□□□ 0.85
SSC5D-203ENST00000588254 NOLC1Q14978 699 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSC5D-203ENST00000588254 PPLO60437 1756 aa20.35■□□□□ 0.85
SSC5D-203ENST00000588254 PNMA6EA0A0J9YXQ4 647 aa20.35■□□□□ 0.85
SSC5D-203ENST00000588254 COG3Q96JB2 828 aa20.35■□□□□ 0.85
SSC5D-203ENST00000588254 ARHGEF28Q8N1W1 1705 aaKnown RBP20.35■□□□□ 0.85
SSC5D-203ENST00000588254 PPP4R3BQ5MIZ7 849 aa20.35■□□□□ 0.85
SSC5D-203ENST00000588254 SYAP1Q96A49 352 aaPredicted RBP20.35■□□□□ 0.85
SSC5D-203ENST00000588254 USP32Q8NFA0 1604 aa20.35■□□□□ 0.85
SSC5D-203ENST00000588254 MCCP23508 829 aa20.34■□□□□ 0.85
SSC5D-203ENST00000588254 SRCIN1Q9C0H9 1055 aa20.34■□□□□ 0.85
SSC5D-203ENST00000588254 TERF1P54274 439 aa20.34■□□□□ 0.85
SSC5D-203ENST00000588254 ZNF710Q8N1W2 664 aa20.34■□□□□ 0.85
SSC5D-203ENST00000588254 HMMRO75330 724 aa20.33■□□□□ 0.85
SSC5D-203ENST00000588254 LMOD3Q0VAK6 560 aa20.33■□□□□ 0.84
SSC5D-203ENST00000588254 MX1P20591 662 aa20.33■□□□□ 0.84
SSC5D-203ENST00000588254 TXNDC2Q86VQ3 553 aa20.33■□□□□ 0.84
SSC5D-203ENST00000588254 FKBP5Q13451 457 aaPredicted RBP20.32■□□□□ 0.84
SSC5D-203ENST00000588254 ABCC3O15438 1527 aa20.31■□□□□ 0.84
SSC5D-203ENST00000588254 PUS7Q96PZ0 661 aaKnown RBP20.31■□□□□ 0.84
SSC5D-203ENST00000588254 MLECQ14165 292 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms