RNA–Protein interactions for RNA: ENST00000588190.1

SMAD7-206, Transcript of SMAD family member 7, humanhuman

TSL 5

Gene SMAD7, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-206ENST00000588190 TMF1P82094 1093 aa19.65■□□□□ 0.74
SMAD7-206ENST00000588190 RAPGEF4Q8WZA2 1011 aa19.65■□□□□ 0.74
SMAD7-206ENST00000588190 AKT1S1Q96B36 256 aa19.65■□□□□ 0.74
SMAD7-206ENST00000588190 SLC16A10Q8TF71 515 aa19.64■□□□□ 0.73
SMAD7-206ENST00000588190 CCNL1Q9UK58 526 aaPredicted RBP19.64■□□□□ 0.73
SMAD7-206ENST00000588190 RGPD2P0DJD1 1756 aa19.63■□□□□ 0.73
SMAD7-206ENST00000588190 FAM208AQ9UK61 1670 aaKnown RBP19.63■□□□□ 0.73
SMAD7-206ENST00000588190 ANKRD36BQ8N2N9 1353 aa19.63■□□□□ 0.73
SMAD7-206ENST00000588190 PNPLA7Q6ZV29 1317 aa19.62■□□□□ 0.73
SMAD7-206ENST00000588190 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
SMAD7-206ENST00000588190 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
SMAD7-206ENST00000588190 PAPPAQ13219 1627 aa19.62■□□□□ 0.73
SMAD7-206ENST00000588190 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
SMAD7-206ENST00000588190 USP47Q96K76 1375 aa19.61■□□□□ 0.73
SMAD7-206ENST00000588190 TATP17735 454 aaPredicted RBP19.61■□□□□ 0.73
SMAD7-206ENST00000588190 DOT1LQ8TEK3 1739 aa19.6■□□□□ 0.73
SMAD7-206ENST00000588190 FYB1O15117 783 aa19.6■□□□□ 0.73
SMAD7-206ENST00000588190 CHD4Q14839 1912 aa19.59■□□□□ 0.73
SMAD7-206ENST00000588190 PPM1GO15355 546 aaPredicted RBP19.59■□□□□ 0.73
SMAD7-206ENST00000588190 MEGF6O75095 1541 aa19.59■□□□□ 0.73
SMAD7-206ENST00000588190 HSP90AB2PQ58FF8 381 aa19.58■□□□□ 0.72
SMAD7-206ENST00000588190 MSL1Q68DK7 614 aa19.58■□□□□ 0.72
SMAD7-206ENST00000588190 MPRIPQ6WCQ1 1025 aa19.58■□□□□ 0.72
SMAD7-206ENST00000588190 UTRNP46939 3433 aa19.57■□□□□ 0.72
SMAD7-206ENST00000588190 SENP3-EIF4A1A0A087X0R7 540 aa19.56■□□□□ 0.72
SMAD7-206ENST00000588190 CDCA8Q53HL2 280 aa19.56■□□□□ 0.72
SMAD7-206ENST00000588190 NLGN2Q8NFZ4 835 aa19.56■□□□□ 0.72
SMAD7-206ENST00000588190 POLR3GLQ9BT43 218 aa19.56■□□□□ 0.72
SMAD7-206ENST00000588190 RTL1A6NKG5 1358 aa19.56■□□□□ 0.72
SMAD7-206ENST00000588190 CGNL1Q0VF96 1302 aa19.55■□□□□ 0.72
SMAD7-206ENST00000588190 MAP3K5Q99683 1374 aa19.55■□□□□ 0.72
SMAD7-206ENST00000588190 COL23A1Q86Y22 540 aaPredicted RBP19.54■□□□□ 0.72
SMAD7-206ENST00000588190 NSD2O96028 1365 aa19.54■□□□□ 0.72
SMAD7-206ENST00000588190 PCDH11XQ9BZA7 1347 aa19.53■□□□□ 0.72
SMAD7-206ENST00000588190 PCDH11YQ9BZA8 1340 aa19.53■□□□□ 0.72
SMAD7-206ENST00000588190 TUBGCP6Q96RT7 1819 aa19.51■□□□□ 0.71
SMAD7-206ENST00000588190 LY75O60449 1722 aa19.51■□□□□ 0.71
SMAD7-206ENST00000588190 SHANK3Q9BYB0 1731 aa19.51■□□□□ 0.71
SMAD7-206ENST00000588190 INSRP06213 1382 aa19.5■□□□□ 0.71
SMAD7-206ENST00000588190 FLT4P35916 1363 aa19.5■□□□□ 0.71
SMAD7-206ENST00000588190 C1QTNF8P60827 252 aa19.5■□□□□ 0.71
SMAD7-206ENST00000588190 EMILIN1Q9Y6C2 1016 aa19.5■□□□□ 0.71
SMAD7-206ENST00000588190 QSER1Q2KHR3 1735 aa19.5■□□□□ 0.71
SMAD7-206ENST00000588190 GIGYF1O75420 1035 aaPredicted RBP19.49■□□□□ 0.71
SMAD7-206ENST00000588190 AK7Q96M32 723 aa19.49■□□□□ 0.71
SMAD7-206ENST00000588190 PALLDQ8WX93 1383 aa19.48■□□□□ 0.71
SMAD7-206ENST00000588190 GRIN3BO60391 1043 aa19.48■□□□□ 0.71
SMAD7-206ENST00000588190 PHF14O94880 888 aa19.48■□□□□ 0.71
SMAD7-206ENST00000588190 KIF20BQ96Q89 1820 aa19.48■□□□□ 0.71
SMAD7-206ENST00000588190 HMGB2P26583 209 aaKnown RBP19.47■□□□□ 0.71
SMAD7-206ENST00000588190 TRIM26Q12899 539 aaPredicted RBP19.47■□□□□ 0.71
SMAD7-206ENST00000588190 FLAD1Q8NFF5 587 aa19.47■□□□□ 0.71
SMAD7-206ENST00000588190 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.71
SMAD7-206ENST00000588190 CYP27B1O15528 508 aa19.46■□□□□ 0.71
SMAD7-206ENST00000588190 SMARCC1Q92922 1105 aaPredicted RBP19.46■□□□□ 0.71
SMAD7-206ENST00000588190 CARD14Q9BXL6 1004 aa19.46■□□□□ 0.71
SMAD7-206ENST00000588190 WWC3Q9ULE0 1092 aa19.46■□□□□ 0.71
SMAD7-206ENST00000588190 SPG7Q9UQ90 795 aa19.46■□□□□ 0.71
SMAD7-206ENST00000588190 YBX3P16989 372 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMAD7-206ENST00000588190 TNNT2P45379 298 aaPredicted RBP19.45■□□□□ 0.7
SMAD7-206ENST00000588190 SMIM5Q71RC9 77 aa19.44■□□□□ 0.7
SMAD7-206ENST00000588190 C5P01031 1676 aa19.43■□□□□ 0.7
SMAD7-206ENST00000588190 PIGBQ92521 554 aa19.42■□□□□ 0.7
SMAD7-206ENST00000588190 TMOD3Q9NYL9 352 aa19.42■□□□□ 0.7
SMAD7-206ENST00000588190 KIF24Q5T7B8 1368 aa19.42■□□□□ 0.7
SMAD7-206ENST00000588190 GOLGB1Q14789 3259 aaKnown RBP19.42■□□□□ 0.7
SMAD7-206ENST00000588190 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
SMAD7-206ENST00000588190 CD2APQ9Y5K6 639 aa19.4■□□□□ 0.7
SMAD7-206ENST00000588190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.39■□□□□ 0.69
SMAD7-206ENST00000588190 ZNF526Q8TF50 670 aaPredicted RBP19.39■□□□□ 0.69
SMAD7-206ENST00000588190 EYA1Q99502 592 aa19.39■□□□□ 0.69
SMAD7-206ENST00000588190 COL24A1Q17RW2 1714 aa19.39■□□□□ 0.69
SMAD7-206ENST00000588190 ITGB4P16144 1822 aa19.39■□□□□ 0.69
SMAD7-206ENST00000588190 LOC102724428A0A0B4J2F2 783 aa19.38■□□□□ 0.69
SMAD7-206ENST00000588190 ATP6V1AP38606 617 aa19.38■□□□□ 0.69
SMAD7-206ENST00000588190 SIK1P57059 783 aa19.38■□□□□ 0.69
SMAD7-206ENST00000588190 GNPATO15228 680 aa19.37■□□□□ 0.69
SMAD7-206ENST00000588190 IFNL2Q8IZJ0 200 aa19.37■□□□□ 0.69
SMAD7-206ENST00000588190 ASAP1Q9ULH1 1129 aa19.37■□□□□ 0.69
SMAD7-206ENST00000588190 TAF1LQ8IZX4 1826 aa19.37■□□□□ 0.69
SMAD7-206ENST00000588190 WASHC2AQ641Q2 1341 aa19.36■□□□□ 0.69
SMAD7-206ENST00000588190 AMIGO3Q86WK7 504 aa19.36■□□□□ 0.69
SMAD7-206ENST00000588190 LINC00116Q8NCU8 138 aa19.36■□□□□ 0.69
SMAD7-206ENST00000588190 MAP2P11137 1827 aaKnown RBP19.36■□□□□ 0.69
SMAD7-206ENST00000588190 C4BP0C0L5 1744 aa19.36■□□□□ 0.69
SMAD7-206ENST00000588190 TOGARAM1Q9Y4F4 1720 aa19.34■□□□□ 0.69
SMAD7-206ENST00000588190 NKX1-1Q15270 411 aaPredicted RBP19.34■□□□□ 0.69
SMAD7-206ENST00000588190 RBM42Q9BTD8 480 aaKnown RBP19.34■□□□□ 0.69
SMAD7-206ENST00000588190 GPBP1L1Q9HC44 474 aaPredicted RBP19.34■□□□□ 0.69
SMAD7-206ENST00000588190 POLKQ9UBT6 870 aa19.34■□□□□ 0.69
SMAD7-206ENST00000588190 IGSF1Q8N6C5 1336 aa19.33■□□□□ 0.69
SMAD7-206ENST00000588190 PHKG2P15735 406 aa19.33■□□□□ 0.68
SMAD7-206ENST00000588190 SSFA2P28290 1259 aa19.33■□□□□ 0.68
SMAD7-206ENST00000588190 EIF4A2Q14240 407 aaKnown RBP19.32■□□□□ 0.68
SMAD7-206ENST00000588190 ATP10DQ9P241 1426 aa19.32■□□□□ 0.68
SMAD7-206ENST00000588190 PKD1L3Q7Z443 1732 aa19.31■□□□□ 0.68
SMAD7-206ENST00000588190 ITPK1Q13572 414 aa19.31■□□□□ 0.68
SMAD7-206ENST00000588190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMAD7-206ENST00000588190 ATG3Q9NT62 314 aa19.3■□□□□ 0.68
SMAD7-206ENST00000588190 TRAPPC3LQ5T215 181 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms