RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 NSD2O96028 1365 aa20.46■□□□□ 0.87
KDM4B-204ENST00000588166 SLC27A3Q5K4L6 730 aa20.46■□□□□ 0.87
KDM4B-204ENST00000588166 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
KDM4B-204ENST00000588166 CDCA8Q53HL2 280 aa20.45■□□□□ 0.86
KDM4B-204ENST00000588166 DDX54Q8TDD1 881 aaKnown RBP20.45■□□□□ 0.86
KDM4B-204ENST00000588166 MAP3K19Q56UN5 1328 aa20.45■□□□□ 0.86
KDM4B-204ENST00000588166 PNPLA7Q6ZV29 1317 aa20.45■□□□□ 0.86
KDM4B-204ENST00000588166 ANKRD36BQ8N2N9 1353 aa20.45■□□□□ 0.86
KDM4B-204ENST00000588166 LTV1Q96GA3 475 aaPredicted RBP20.44■□□□□ 0.86
KDM4B-204ENST00000588166 MEGF6O75095 1541 aa20.43■□□□□ 0.86
KDM4B-204ENST00000588166 FBLN1P23142 703 aa20.43■□□□□ 0.86
KDM4B-204ENST00000588166 HOXC9P31274 260 aa20.43■□□□□ 0.86
KDM4B-204ENST00000588166 SLC16A10Q8TF71 515 aa20.43■□□□□ 0.86
KDM4B-204ENST00000588166 CEP350Q5VT06 3117 aa20.42■□□□□ 0.86
KDM4B-204ENST00000588166 PRIM1P49642 420 aaKnown RBP20.41■□□□□ 0.86
KDM4B-204ENST00000588166 KCNQ4P56696 695 aa20.41■□□□□ 0.86
KDM4B-204ENST00000588166 COG3Q96JB2 828 aa20.4■□□□□ 0.86
KDM4B-204ENST00000588166 HSPA5P11021 654 aaKnown RBP20.38■□□□□ 0.85
KDM4B-204ENST00000588166 ZCRB1Q8TBF4 217 aaKnown RBP20.38■□□□□ 0.85
KDM4B-204ENST00000588166 RTL1A6NKG5 1358 aa20.37■□□□□ 0.85
KDM4B-204ENST00000588166 SYTL4Q96C24 671 aaPredicted RBP20.37■□□□□ 0.85
KDM4B-204ENST00000588166 POLD1P28340 1107 aa20.36■□□□□ 0.85
KDM4B-204ENST00000588166 AMPHP49418 695 aa20.36■□□□□ 0.85
KDM4B-204ENST00000588166 TFCP2L1Q9NZI6 479 aa20.36■□□□□ 0.85
KDM4B-204ENST00000588166 GPR162Q16538 588 aa20.35■□□□□ 0.85
KDM4B-204ENST00000588166 NBPF6Q5VWK0 638 aa20.35■□□□□ 0.85
KDM4B-204ENST00000588166 NBPF4Q96M43 638 aa20.35■□□□□ 0.85
KDM4B-204ENST00000588166 C1QTNF8P60827 252 aa20.34■□□□□ 0.85
KDM4B-204ENST00000588166 NLGN2Q8NFZ4 835 aa20.34■□□□□ 0.85
KDM4B-204ENST00000588166 FYB1O15117 783 aa20.33■□□□□ 0.85
KDM4B-204ENST00000588166 RRS1Q15050 365 aaKnown RBP20.33■□□□□ 0.85
KDM4B-204ENST00000588166 CCNL1Q9UK58 526 aaPredicted RBP20.33■□□□□ 0.85
KDM4B-204ENST00000588166 C5P01031 1676 aa20.32■□□□□ 0.84
KDM4B-204ENST00000588166 CGNL1Q0VF96 1302 aa20.31■□□□□ 0.84
KDM4B-204ENST00000588166 COL23A1Q86Y22 540 aaPredicted RBP20.31■□□□□ 0.84
KDM4B-204ENST00000588166 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
KDM4B-204ENST00000588166 USHBP1Q8N6Y0 703 aa20.31■□□□□ 0.84
KDM4B-204ENST00000588166 TAF1LQ8IZX4 1826 aa20.31■□□□□ 0.84
KDM4B-204ENST00000588166 KIF20BQ96Q89 1820 aa20.3■□□□□ 0.84
KDM4B-204ENST00000588166 GGNBP2Q9H3C7 697 aa20.29■□□□□ 0.84
KDM4B-204ENST00000588166 TOGARAM1Q9Y4F4 1720 aa20.29■□□□□ 0.84
KDM4B-204ENST00000588166 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
KDM4B-204ENST00000588166 INSRP06213 1382 aa20.27■□□□□ 0.84
KDM4B-204ENST00000588166 SENP3-EIF4A1A0A087X0R7 540 aa20.27■□□□□ 0.84
KDM4B-204ENST00000588166 ITGB4P16144 1822 aa20.26■□□□□ 0.83
KDM4B-204ENST00000588166 HSP90AB2PQ58FF8 381 aa20.26■□□□□ 0.83
KDM4B-204ENST00000588166 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
KDM4B-204ENST00000588166 SMG6Q86US8 1419 aaKnown RBP20.26■□□□□ 0.83
KDM4B-204ENST00000588166 PKD1L3Q7Z443 1732 aa20.25■□□□□ 0.83
KDM4B-204ENST00000588166 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
KDM4B-204ENST00000588166 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
KDM4B-204ENST00000588166 FLT4P35916 1363 aa20.24■□□□□ 0.83
KDM4B-204ENST00000588166 KIF24Q5T7B8 1368 aa20.24■□□□□ 0.83
KDM4B-204ENST00000588166 PCDH11XQ9BZA7 1347 aa20.24■□□□□ 0.83
KDM4B-204ENST00000588166 PCDH11YQ9BZA8 1340 aa20.24■□□□□ 0.83
KDM4B-204ENST00000588166 PALLDQ8WX93 1383 aa20.23■□□□□ 0.83
KDM4B-204ENST00000588166 CYP27B1O15528 508 aa20.23■□□□□ 0.83
KDM4B-204ENST00000588166 C4BP0C0L5 1744 aa20.23■□□□□ 0.83
KDM4B-204ENST00000588166 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
KDM4B-204ENST00000588166 NCAPD2Q15021 1401 aa20.23■□□□□ 0.83
KDM4B-204ENST00000588166 MSL1Q68DK7 614 aa20.23■□□□□ 0.83
KDM4B-204ENST00000588166 ANKRD26Q9UPS8 1709 aa20.22■□□□□ 0.83
KDM4B-204ENST00000588166 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
KDM4B-204ENST00000588166 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
KDM4B-204ENST00000588166 UBR3Q6ZT12 1888 aa20.22■□□□□ 0.83
KDM4B-204ENST00000588166 MSH5O43196 834 aa20.21■□□□□ 0.83
KDM4B-204ENST00000588166 AMIGO3Q86WK7 504 aa20.21■□□□□ 0.83
KDM4B-204ENST00000588166 GRIN3BO60391 1043 aa20.2■□□□□ 0.82
KDM4B-204ENST00000588166 CARD14Q9BXL6 1004 aa20.2■□□□□ 0.82
KDM4B-204ENST00000588166 MPRIPQ6WCQ1 1025 aa20.19■□□□□ 0.82
KDM4B-204ENST00000588166 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
KDM4B-204ENST00000588166 FLAD1Q8NFF5 587 aa20.18■□□□□ 0.82
KDM4B-204ENST00000588166 NSD3Q9BZ95 1437 aa20.18■□□□□ 0.82
KDM4B-204ENST00000588166 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
KDM4B-204ENST00000588166 NKX1-1Q15270 411 aaPredicted RBP20.16■□□□□ 0.82
KDM4B-204ENST00000588166 PIGBQ92521 554 aa20.16■□□□□ 0.82
KDM4B-204ENST00000588166 HMGB2P26583 209 aaKnown RBP20.15■□□□□ 0.82
KDM4B-204ENST00000588166 KIF7Q2M1P5 1343 aa20.15■□□□□ 0.82
KDM4B-204ENST00000588166 ATP10DQ9P241 1426 aa20.15■□□□□ 0.82
KDM4B-204ENST00000588166 ADCY9O60503 1353 aa20.14■□□□□ 0.81
KDM4B-204ENST00000588166 ZEB1P37275 1124 aaPredicted RBP20.14■□□□□ 0.81
KDM4B-204ENST00000588166 SMARCC1Q92922 1105 aaPredicted RBP20.14■□□□□ 0.81
KDM4B-204ENST00000588166 SMIM5Q71RC9 77 aa20.13■□□□□ 0.81
KDM4B-204ENST00000588166 WASHC2AQ641Q2 1341 aa20.11■□□□□ 0.81
KDM4B-204ENST00000588166 LINC00116Q8NCU8 138 aa20.11■□□□□ 0.81
KDM4B-204ENST00000588166 AK7Q96M32 723 aa20.11■□□□□ 0.81
KDM4B-204ENST00000588166 PANK3Q9H999 370 aa20.11■□□□□ 0.81
KDM4B-204ENST00000588166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.1■□□□□ 0.81
KDM4B-204ENST00000588166 EYA1Q99502 592 aa20.1■□□□□ 0.81
KDM4B-204ENST00000588166 LOC102724428A0A0B4J2F2 783 aa20.09■□□□□ 0.81
KDM4B-204ENST00000588166 SIK1P57059 783 aa20.09■□□□□ 0.81
KDM4B-204ENST00000588166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.09■□□□□ 0.81
KDM4B-204ENST00000588166 PHF14O94880 888 aa20.08■□□□□ 0.81
KDM4B-204ENST00000588166 SSFA2P28290 1259 aa20.08■□□□□ 0.81
KDM4B-204ENST00000588166 ITPK1Q13572 414 aa20.08■□□□□ 0.81
KDM4B-204ENST00000588166 SPG7Q9UQ90 795 aa20.08■□□□□ 0.81
KDM4B-204ENST00000588166 IGSF1Q8N6C5 1336 aa20.07■□□□□ 0.8
KDM4B-204ENST00000588166 ASAP1Q9ULH1 1129 aa20.07■□□□□ 0.8
KDM4B-204ENST00000588166 KIF13BQ9NQT8 1826 aa20.06■□□□□ 0.8
KDM4B-204ENST00000588166 PPM1GO15355 546 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms