RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 EVA1CP58658 441 aa14.86□□□□□ -0.03
VMP1-207ENST00000588131 TOM1L2Q6ZVM7 507 aa14.86□□□□□ -0.03
VMP1-207ENST00000588131 NWD2Q9ULI1 1742 aa14.86□□□□□ -0.03
VMP1-207ENST00000588131 PDE3BQ13370 1112 aa14.85□□□□□ -0.03
VMP1-207ENST00000588131 SLIT2O94813 1529 aa14.85□□□□□ -0.03
VMP1-207ENST00000588131 CRB1P82279 1406 aa14.84□□□□□ -0.03
VMP1-207ENST00000588131 GOLGA2Q08379 1002 aa14.84□□□□□ -0.03
VMP1-207ENST00000588131 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
VMP1-207ENST00000588131 PARP4Q9UKK3 1724 aaKnown RBP14.83□□□□□ -0.03
VMP1-207ENST00000588131 GAS2L2Q8NHY3 880 aa14.83□□□□□ -0.04
VMP1-207ENST00000588131 CARD10Q9BWT7 1032 aa14.83□□□□□ -0.04
VMP1-207ENST00000588131 PKD1L3Q7Z443 1732 aa14.83□□□□□ -0.04
VMP1-207ENST00000588131 SLFN5Q08AF3 891 aa14.82□□□□□ -0.04
VMP1-207ENST00000588131 WDR63Q8IWG1 891 aa14.82□□□□□ -0.04
VMP1-207ENST00000588131 C8orf37Q96NL8 207 aa14.82□□□□□ -0.04
VMP1-207ENST00000588131 THUMPD2Q9BTF0 503 aaKnown RBP14.82□□□□□ -0.04
VMP1-207ENST00000588131 WNK3Q9BYP7 1800 aa14.81□□□□□ -0.04
VMP1-207ENST00000588131 TATP17735 454 aaPredicted RBP14.81□□□□□ -0.04
VMP1-207ENST00000588131 DCTN1Q14203 1278 aa14.81□□□□□ -0.04
VMP1-207ENST00000588131 RAPGEF4Q8WZA2 1011 aa14.81□□□□□ -0.04
VMP1-207ENST00000588131 LMOD3Q0VAK6 560 aa14.8□□□□□ -0.04
VMP1-207ENST00000588131 PLEKHO1Q53GL0 409 aaPredicted RBP14.8□□□□□ -0.04
VMP1-207ENST00000588131 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
VMP1-207ENST00000588131 MAP3K5Q99683 1374 aa14.8□□□□□ -0.04
VMP1-207ENST00000588131 OVOS2A0A0G2JMS6 1433 aa14.8□□□□□ -0.04
VMP1-207ENST00000588131 LRRC37A3O60309 1634 aa14.8□□□□□ -0.04
VMP1-207ENST00000588131 AMOTQ4VCS5 1084 aa14.79□□□□□ -0.04
VMP1-207ENST00000588131 DUSP27Q5VZP5 1158 aa14.79□□□□□ -0.04
VMP1-207ENST00000588131 MCM10Q7L590 875 aa14.79□□□□□ -0.04
VMP1-207ENST00000588131 BCL9LQ86UU0 1499 aa14.79□□□□□ -0.04
VMP1-207ENST00000588131 NGLY1Q96IV0 654 aa14.79□□□□□ -0.04
VMP1-207ENST00000588131 SHANK3Q9BYB0 1731 aa14.79□□□□□ -0.04
VMP1-207ENST00000588131 PLEKHG2Q9H7P9 1386 aa14.79□□□□□ -0.04
VMP1-207ENST00000588131 USP35Q9P2H5 1018 aa14.79□□□□□ -0.04
VMP1-207ENST00000588131 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.78□□□□□ -0.04
VMP1-207ENST00000588131 DISP2A7MBM2 1401 aa14.78□□□□□ -0.04
VMP1-207ENST00000588131 IL16Q14005 1332 aa14.78□□□□□ -0.04
VMP1-207ENST00000588131 E9PSI1 815 aa14.78□□□□□ -0.04
VMP1-207ENST00000588131 ZNF530Q6P9A1 599 aaPredicted RBP14.78□□□□□ -0.04
VMP1-207ENST00000588131 GNAT3A8MTJ3 354 aa14.77□□□□□ -0.05
VMP1-207ENST00000588131 IL2RBP14784 551 aa14.77□□□□□ -0.05
VMP1-207ENST00000588131 MEX3CQ5U5Q3 659 aaKnown RBP14.77□□□□□ -0.05
VMP1-207ENST00000588131 UNC5CLQ8IV45 518 aa14.77□□□□□ -0.05
VMP1-207ENST00000588131 FNBP4Q8N3X1 1017 aaPredicted RBP14.77□□□□□ -0.05
VMP1-207ENST00000588131 VIRMAQ69YN4 1812 aaKnown RBP14.77□□□□□ -0.05
VMP1-207ENST00000588131 SPATA31A1Q5TZJ5 1347 aa14.76□□□□□ -0.05
VMP1-207ENST00000588131 HTATSF1O43719 755 aaKnown RBP14.76□□□□□ -0.05
VMP1-207ENST00000588131 AKAP4Q5JQC9 854 aa14.76□□□□□ -0.05
VMP1-207ENST00000588131 RTF1Q92541 710 aaKnown RBP14.76□□□□□ -0.05
VMP1-207ENST00000588131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.76□□□□□ -0.051e-9■■□□□ 13.6
VMP1-207ENST00000588131 SPG7Q9UQ90 795 aa14.76□□□□□ -0.05
VMP1-207ENST00000588131 ADAMTS7Q9UKP4 1686 aa14.76□□□□□ -0.05
VMP1-207ENST00000588131 SPATA31A5Q5VU36 1347 aa14.75□□□□□ -0.05
VMP1-207ENST00000588131 SPATA31A7Q8IWB4 1347 aa14.75□□□□□ -0.05
VMP1-207ENST00000588131 IL17REQ8NFR9 667 aa14.75□□□□□ -0.05
VMP1-207ENST00000588131 FANCIQ9NVI1 1328 aa14.74□□□□□ -0.05
VMP1-207ENST00000588131 PHKG2P15735 406 aa14.74□□□□□ -0.05
VMP1-207ENST00000588131 CALD1Q05682 793 aaKnown RBP14.74□□□□□ -0.05
VMP1-207ENST00000588131 C1orf141Q5JVX7 400 aa14.74□□□□□ -0.05
VMP1-207ENST00000588131 TSR2Q969E8 191 aaKnown RBP14.74□□□□□ -0.05
VMP1-207ENST00000588131 AFF2P51816 1311 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 CYP27B1O15528 508 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 ZNF853P0CG23 659 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 VPS72Q15906 364 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 MPRIPQ6WCQ1 1025 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 ZCRB1Q8TBF4 217 aaKnown RBP14.73□□□□□ -0.05
VMP1-207ENST00000588131 MYH16Q9H6N6 1097 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 LGR6Q9HBX8 967 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 IFT57Q9NWB7 429 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 USP21Q9UK80 565 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 LAS1LQ9Y4W2 734 aaKnown RBP14.73□□□□□ -0.05
VMP1-207ENST00000588131 KDM6AO15550 1401 aaPredicted RBP14.73□□□□□ -0.05
VMP1-207ENST00000588131 SCN11AQ9UI33 1791 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 CEMIPQ8WUJ3 1361 aa14.73□□□□□ -0.05
VMP1-207ENST00000588131 GNAI1P63096 354 aa14.72□□□□□ -0.05
VMP1-207ENST00000588131 CCDC9Q9Y3X0 531 aaKnown RBP14.72□□□□□ -0.05
VMP1-207ENST00000588131 PCDH11XQ9BZA7 1347 aa14.71□□□□□ -0.05
VMP1-207ENST00000588131 PCDH11YQ9BZA8 1340 aa14.71□□□□□ -0.05
VMP1-207ENST00000588131 RNMTO43148 476 aaKnown RBP14.71□□□□□ -0.05
VMP1-207ENST00000588131 IFNL2Q8IZJ0 200 aa14.71□□□□□ -0.05
VMP1-207ENST00000588131 CFAP44Q96MT7 982 aa14.71□□□□□ -0.05
VMP1-207ENST00000588131 MBIPQ9NS73 344 aa14.71□□□□□ -0.05
VMP1-207ENST00000588131 THRAP3Q9Y2W1 955 aaKnown RBP14.71□□□□□ -0.05
VMP1-207ENST00000588131 SIPA1L3O60292 1781 aaPredicted RBP14.7□□□□□ -0.06
VMP1-207ENST00000588131 GLI3P10071 1580 aa14.7□□□□□ -0.06
VMP1-207ENST00000588131 TNS2Q63HR2 1409 aa14.69□□□□□ -0.06
VMP1-207ENST00000588131 CHL1O00533 1208 aa14.69□□□□□ -0.06
VMP1-207ENST00000588131 EXOSC9Q06265 439 aaKnown RBP14.69□□□□□ -0.06
VMP1-207ENST00000588131 BARGINQ6ZT62 677 aa14.69□□□□□ -0.06
VMP1-207ENST00000588131 MIS18AQ9NYP9 233 aa14.69□□□□□ -0.06
VMP1-207ENST00000588131 ATRNO75882 1429 aa14.68□□□□□ -0.06
VMP1-207ENST00000588131 KDM3BQ7LBC6 1761 aa14.68□□□□□ -0.06
VMP1-207ENST00000588131 DDX54Q8TDD1 881 aaKnown RBP14.68□□□□□ -0.06
VMP1-207ENST00000588131 CDCA7Q9BWT1 371 aaPredicted RBP14.68□□□□□ -0.06
VMP1-207ENST00000588131 RCAN3Q9UKA8 241 aa14.68□□□□□ -0.06
VMP1-207ENST00000588131 SUPT16HQ9Y5B9 1047 aaKnown RBP14.68□□□□□ -0.06
VMP1-207ENST00000588131 TOGARAM1Q9Y4F4 1720 aa14.68□□□□□ -0.06
VMP1-207ENST00000588131 MRC1P22897 1456 aa14.68□□□□□ -0.06
VMP1-207ENST00000588131 THSD7AQ9UPZ6 1657 aa14.67□□□□□ -0.06
VMP1-207ENST00000588131 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms