RNA–Protein interactions for RNA: ENST00000587851.1

SPPL2B-204, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 3

Gene SPPL2B, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-204ENST00000587851 DDX54Q8TDD1 881 aaKnown RBP29.41■■■□□ 2.3
SPPL2B-204ENST00000587851 RAPGEF4Q8WZA2 1011 aa29.41■■■□□ 2.3
SPPL2B-204ENST00000587851 RGPD3A6NKT7 1758 aaPredicted RBP29.41■■■□□ 2.3
SPPL2B-204ENST00000587851 RGPD4Q7Z3J3 1758 aa29.41■■■□□ 2.3
SPPL2B-204ENST00000587851 BCL9O00512 1426 aa29.4■■■□□ 2.3
SPPL2B-204ENST00000587851 EYA1Q99502 592 aa29.4■■■□□ 2.3
SPPL2B-204ENST00000587851 NPC1L1Q9UHC9 1359 aa29.39■■■□□ 2.3
SPPL2B-204ENST00000587851 TATP17735 454 aaPredicted RBP29.39■■■□□ 2.3
SPPL2B-204ENST00000587851 ACSBG1Q96GR2 724 aa29.39■■■□□ 2.3
SPPL2B-204ENST00000587851 EZH2Q15910 746 aaKnown RBP29.38■■■□□ 2.29
SPPL2B-204ENST00000587851 ZCRB1Q8TBF4 217 aaKnown RBP29.36■■■□□ 2.29
SPPL2B-204ENST00000587851 ZEB1P37275 1124 aaPredicted RBP29.35■■■□□ 2.29
SPPL2B-204ENST00000587851 TOGARAM1Q9Y4F4 1720 aa29.34■■■□□ 2.29
SPPL2B-204ENST00000587851 MTHFSP49914 203 aa29.34■■■□□ 2.29
SPPL2B-204ENST00000587851 KCNQ2O43526 872 aa29.33■■■□□ 2.29
SPPL2B-204ENST00000587851 IGSF1Q8N6C5 1336 aa29.32■■■□□ 2.28
SPPL2B-204ENST00000587851 CAMKK2Q96RR4 588 aa29.32■■■□□ 2.28
SPPL2B-204ENST00000587851 BCL11BQ9C0K0 894 aaPredicted RBP29.32■■■□□ 2.28
SPPL2B-204ENST00000587851 PCDH11XQ9BZA7 1347 aa29.29■■■□□ 2.28
SPPL2B-204ENST00000587851 PCDH11YQ9BZA8 1340 aa29.29■■■□□ 2.28
SPPL2B-204ENST00000587851 ITGB4P16144 1822 aa29.29■■■□□ 2.28
SPPL2B-204ENST00000587851 COL3A1P02461 1466 aaPredicted RBP29.28■■■□□ 2.28
SPPL2B-204ENST00000587851 PARD3Q8TEW0 1356 aa29.27■■■□□ 2.28
SPPL2B-204ENST00000587851 AEBP1Q8IUX7 1158 aa29.26■■■□□ 2.27
SPPL2B-204ENST00000587851 IL13P35225 146 aa29.25■■■□□ 2.27
SPPL2B-204ENST00000587851 SYTL4Q96C24 671 aaPredicted RBP29.24■■■□□ 2.27
SPPL2B-204ENST00000587851 CYP27B1O15528 508 aa29.23■■■□□ 2.27
SPPL2B-204ENST00000587851 DDX10Q13206 875 aaKnown RBP29.22■■■□□ 2.27
SPPL2B-204ENST00000587851 PSDA5PKW4 1024 aaPredicted RBP29.21■■■□□ 2.27
SPPL2B-204ENST00000587851 SPG7Q9UQ90 795 aa29.21■■■□□ 2.27
SPPL2B-204ENST00000587851 SULT6B1Q6IMI4 303 aa29.2■■■□□ 2.26
SPPL2B-204ENST00000587851 VIRMAQ69YN4 1812 aaKnown RBP29.2■■■□□ 2.26
SPPL2B-204ENST00000587851 LY75O60449 1722 aa29.2■■■□□ 2.26
SPPL2B-204ENST00000587851 PLSCR1O15162 318 aa29.19■■■□□ 2.26
SPPL2B-204ENST00000587851 PRIM1P49642 420 aaKnown RBP29.19■■■□□ 2.26
SPPL2B-204ENST00000587851 DIAPH1O60610 1272 aaKnown RBP29.18■■■□□ 2.26
SPPL2B-204ENST00000587851 KDRP35968 1356 aa29.17■■■□□ 2.26
SPPL2B-204ENST00000587851 PPP2R1AP30153 589 aa29.17■■■□□ 2.26
SPPL2B-204ENST00000587851 HMOX1P09601 288 aa29.16■■■□□ 2.26
SPPL2B-204ENST00000587851 R3HDM1Q15032 1099 aaKnown RBP29.14■■■□□ 2.26
SPPL2B-204ENST00000587851 PAPPAQ13219 1627 aa29.13■■■□□ 2.25
SPPL2B-204ENST00000587851 TXNRD1Q16881 649 aa29.13■■■□□ 2.25
SPPL2B-204ENST00000587851 PROM2Q8N271 834 aa29.13■■■□□ 2.25
SPPL2B-204ENST00000587851 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.13■■■□□ 2.25
SPPL2B-204ENST00000587851 PLEKHG2Q9H7P9 1386 aa29.13■■■□□ 2.25
SPPL2B-204ENST00000587851 U2SURPO15042 1029 aaKnown RBP29.12■■■□□ 2.25
SPPL2B-204ENST00000587851 PHKG2P15735 406 aa29.12■■■□□ 2.25
SPPL2B-204ENST00000587851 PLEKHO1Q53GL0 409 aaPredicted RBP29.1■■■□□ 2.25
SPPL2B-204ENST00000587851 ZNF530Q6P9A1 599 aaPredicted RBP29.1■■■□□ 2.25
SPPL2B-204ENST00000587851 IFNL2Q8IZJ0 200 aa29.1■■■□□ 2.25
SPPL2B-204ENST00000587851 CFAP53Q96M91 514 aa29.1■■■□□ 2.25
SPPL2B-204ENST00000587851 SCN11AQ9UI33 1791 aa29.1■■■□□ 2.25
SPPL2B-204ENST00000587851 ANO8Q9HCE9 1232 aaPredicted RBP29.09■■■□□ 2.25
SPPL2B-204ENST00000587851 MPRIPQ6WCQ1 1025 aa29.08■■■□□ 2.25
SPPL2B-204ENST00000587851 NKX1-1Q15270 411 aaPredicted RBP29.07■■■□□ 2.24
SPPL2B-204ENST00000587851 NBPF14Q5TI25 921 aa29.07■■■□□ 2.24
SPPL2B-204ENST00000587851 TUBGCP6Q96RT7 1819 aa29.06■■■□□ 2.24
SPPL2B-204ENST00000587851 KDM6AO15550 1401 aaPredicted RBP29.06■■■□□ 2.24
SPPL2B-204ENST00000587851 C5P01031 1676 aa29.05■■■□□ 2.24
SPPL2B-204ENST00000587851 AMOTQ4VCS5 1084 aa29.05■■■□□ 2.24
SPPL2B-204ENST00000587851 TAF1LQ8IZX4 1826 aa29.05■■■□□ 2.24
SPPL2B-204ENST00000587851 CASZ1Q86V15 1759 aa29.04■■■□□ 2.24
SPPL2B-204ENST00000587851 KCNQ4P56696 695 aa29.04■■■□□ 2.24
SPPL2B-204ENST00000587851 LRP5O75197 1615 aa29.02■■■□□ 2.24
SPPL2B-204ENST00000587851 C1orf141Q5JVX7 400 aa29.02■■■□□ 2.24
SPPL2B-204ENST00000587851 LRRC4BQ9NT99 713 aa29.02■■■□□ 2.24
SPPL2B-204ENST00000587851 PALLDQ8WX93 1383 aa29.01■■■□□ 2.23
SPPL2B-204ENST00000587851 TMOD3Q9NYL9 352 aa29■■■□□ 2.23
SPPL2B-204ENST00000587851 PIGBQ92521 554 aa28.99■■■□□ 2.23
SPPL2B-204ENST00000587851 STK32BQ9NY57 414 aa28.98■■■□□ 2.23
SPPL2B-204ENST00000587851 HSP90AB1P08238 724 aaKnown RBP28.97■■■□□ 2.23
SPPL2B-204ENST00000587851 DCAF5Q96JK2 942 aa28.97■■■□□ 2.23
SPPL2B-204ENST00000587851 QSER1Q2KHR3 1735 aa28.97■■■□□ 2.23
SPPL2B-204ENST00000587851 MTHFSDQ2M296 383 aaKnown RBP28.96■■■□□ 2.23
SPPL2B-204ENST00000587851 CCNL1Q9UK58 526 aaPredicted RBP28.96■■■□□ 2.23
SPPL2B-204ENST00000587851 NUDCQ9Y266 331 aa28.96■■■□□ 2.23
SPPL2B-204ENST00000587851 ADAMTS7Q9UKP4 1686 aa28.96■■■□□ 2.23
SPPL2B-204ENST00000587851 U2AF1L5P0DN76 240 aaPredicted RBP28.95■■■□□ 2.22
SPPL2B-204ENST00000587851 U2AF1Q01081 240 aaKnown RBP eCLIP28.95■■■□□ 2.22
SPPL2B-204ENST00000587851 RALBP1Q15311 655 aa28.95■■■□□ 2.22
SPPL2B-204ENST00000587851 PRKAR2BP31323 418 aa28.94■■■□□ 2.22
SPPL2B-204ENST00000587851 ZNF827Q17R98 1081 aa28.94■■■□□ 2.22
SPPL2B-204ENST00000587851 SLC27A3Q5K4L6 730 aa28.94■■■□□ 2.22
SPPL2B-204ENST00000587851 ZNF316A6NFI3 1004 aaPredicted RBP28.93■■■□□ 2.22
SPPL2B-204ENST00000587851 SLC15A2Q16348 729 aa28.93■■■□□ 2.22
SPPL2B-204ENST00000587851 RSPH6AQ9H0K4 717 aa28.93■■■□□ 2.22
SPPL2B-204ENST00000587851 AKAP4Q5JQC9 854 aa28.92■■■□□ 2.22
SPPL2B-204ENST00000587851 C4BP0C0L5 1744 aa28.91■■■□□ 2.22
SPPL2B-204ENST00000587851 PDGFDQ9GZP0 370 aaPredicted RBP28.91■■■□□ 2.22
SPPL2B-204ENST00000587851 ASAP1Q9ULH1 1129 aa28.91■■■□□ 2.22
SPPL2B-204ENST00000587851 ERVV-2B6SEH9 535 aa28.9■■■□□ 2.22
SPPL2B-204ENST00000587851 CABP4P57796 275 aa28.9■■■□□ 2.22
SPPL2B-204ENST00000587851 SMARCC1Q92922 1105 aaPredicted RBP28.9■■■□□ 2.22
SPPL2B-204ENST00000587851 DLG5Q8TDM6 1919 aa28.9■■■□□ 2.22
SPPL2B-204ENST00000587851 MRC1P22897 1456 aa28.9■■■□□ 2.22
SPPL2B-204ENST00000587851 MYBBP1AQ9BQG0 1328 aaKnown RBP28.9■■■□□ 2.22
SPPL2B-204ENST00000587851 SIPA1L3O60292 1781 aaPredicted RBP28.88■■■□□ 2.21
SPPL2B-204ENST00000587851 PHACTR3Q96KR7 559 aa28.87■■■□□ 2.21
SPPL2B-204ENST00000587851 LGR6Q9HBX8 967 aa28.87■■■□□ 2.21
SPPL2B-204ENST00000587851 ATG3Q9NT62 314 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms