RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 TAF1LQ8IZX4 1826 aa26.15■■□□□ 1.78
TRIM47-205ENST00000587774 FLT4P35916 1363 aa26.14■■□□□ 1.78
TRIM47-205ENST00000587774 COL24A1Q17RW2 1714 aa26.13■■□□□ 1.77
TRIM47-205ENST00000587774 INSRP06213 1382 aa26.12■■□□□ 1.77
TRIM47-205ENST00000587774 KIF24Q5T7B8 1368 aa26.12■■□□□ 1.77
TRIM47-205ENST00000587774 STK32BQ9NY57 414 aa26.12■■□□□ 1.77
TRIM47-205ENST00000587774 C5P01031 1676 aa26.12■■□□□ 1.77
TRIM47-205ENST00000587774 SLC15A2Q16348 729 aa26.11■■□□□ 1.77
TRIM47-205ENST00000587774 NBPF6Q5VWK0 638 aa26.11■■□□□ 1.77
TRIM47-205ENST00000587774 NBPF4Q96M43 638 aa26.11■■□□□ 1.77
TRIM47-205ENST00000587774 USHBP1Q8N6Y0 703 aa26.1■■□□□ 1.77
TRIM47-205ENST00000587774 PPP1R1BQ9UD71 204 aaPredicted RBP26.1■■□□□ 1.77
TRIM47-205ENST00000587774 HSP90AB2PQ58FF8 381 aa26.09■■□□□ 1.77
TRIM47-205ENST00000587774 NSD2O96028 1365 aa26.08■■□□□ 1.77
TRIM47-205ENST00000587774 ZBTB7AO95365 584 aa26.07■■□□□ 1.76
TRIM47-205ENST00000587774 ZCRB1Q8TBF4 217 aaKnown RBP26.07■■□□□ 1.76
TRIM47-205ENST00000587774 UTRNP46939 3433 aa26.06■■□□□ 1.76
TRIM47-205ENST00000587774 LRRC4BQ9NT99 713 aa26.05■■□□□ 1.76
TRIM47-205ENST00000587774 EMILIN1Q9Y6C2 1016 aa26.05■■□□□ 1.76
TRIM47-205ENST00000587774 SYTL4Q96C24 671 aaPredicted RBP26.04■■□□□ 1.76
TRIM47-205ENST00000587774 CGNL1Q0VF96 1302 aa26.04■■□□□ 1.76
TRIM47-205ENST00000587774 NCAPD2Q15021 1401 aa26.04■■□□□ 1.76
TRIM47-205ENST00000587774 CCER1Q8TC90 406 aaPredicted RBP26.03■■□□□ 1.76
TRIM47-205ENST00000587774 RAPGEF4Q8WZA2 1011 aa26.03■■□□□ 1.76
TRIM47-205ENST00000587774 POLR3GLQ9BT43 218 aa26.03■■□□□ 1.76
TRIM47-205ENST00000587774 PTGER2P43116 358 aa26.02■■□□□ 1.76
TRIM47-205ENST00000587774 PRIM1P49642 420 aaKnown RBP26.02■■□□□ 1.76
TRIM47-205ENST00000587774 ZNF827Q17R98 1081 aa26.02■■□□□ 1.76
TRIM47-205ENST00000587774 CHD4Q14839 1912 aa26.02■■□□□ 1.76
TRIM47-205ENST00000587774 EIF4G2P78344 907 aaKnown RBP eCLIP26■■□□□ 1.75
TRIM47-205ENST00000587774 ATF5Q9Y2D1 282 aaPredicted RBP26■■□□□ 1.75
TRIM47-205ENST00000587774 HSPA5P11021 654 aaKnown RBP25.99■■□□□ 1.75
TRIM47-205ENST00000587774 TATP17735 454 aaPredicted RBP25.99■■□□□ 1.75
TRIM47-205ENST00000587774 PCDH11XQ9BZA7 1347 aa25.98■■□□□ 1.75
TRIM47-205ENST00000587774 PCDH11YQ9BZA8 1340 aa25.98■■□□□ 1.75
TRIM47-205ENST00000587774 SLC27A3Q5K4L6 730 aa25.98■■□□□ 1.75
TRIM47-205ENST00000587774 MTFR1LQ9H019 292 aa25.98■■□□□ 1.75
TRIM47-205ENST00000587774 PPM1GO15355 546 aaPredicted RBP25.97■■□□□ 1.75
TRIM47-205ENST00000587774 VIRMAQ69YN4 1812 aaKnown RBP25.97■■□□□ 1.75
TRIM47-205ENST00000587774 UBR3Q6ZT12 1888 aa25.96■■□□□ 1.75
TRIM47-205ENST00000587774 GOLGB1Q14789 3259 aaKnown RBP25.96■■□□□ 1.75
TRIM47-205ENST00000587774 KCNQ4P56696 695 aa25.95■■□□□ 1.74
TRIM47-205ENST00000587774 AKT1S1Q96B36 256 aa25.95■■□□□ 1.74
TRIM47-205ENST00000587774 SGIP1Q9BQI5 828 aa25.94■■□□□ 1.74
TRIM47-205ENST00000587774 WASHC2AQ641Q2 1341 aa25.93■■□□□ 1.74
TRIM47-205ENST00000587774 C4BP0C0L5 1744 aa25.93■■□□□ 1.74
TRIM47-205ENST00000587774 POLKQ9UBT6 870 aa25.91■■□□□ 1.74
TRIM47-205ENST00000587774 CYP27B1O15528 508 aa25.9■■□□□ 1.74
TRIM47-205ENST00000587774 PNPLA7Q6ZV29 1317 aa25.89■■□□□ 1.74
TRIM47-205ENST00000587774 CCNL1Q9UK58 526 aaPredicted RBP25.89■■□□□ 1.74
TRIM47-205ENST00000587774 TNNT2P45379 298 aaPredicted RBP25.88■■□□□ 1.73
TRIM47-205ENST00000587774 FHDC1Q9C0D6 1143 aaPredicted RBP25.88■■□□□ 1.73
TRIM47-205ENST00000587774 PANK3Q9H999 370 aa25.88■■□□□ 1.73
TRIM47-205ENST00000587774 EYA1Q99502 592 aa25.87■■□□□ 1.73
TRIM47-205ENST00000587774 PALLDQ8WX93 1383 aa25.85■■□□□ 1.73
TRIM47-205ENST00000587774 TFCP2L1Q9NZI6 479 aa25.85■■□□□ 1.73
TRIM47-205ENST00000587774 DCAF8L1A6NGE4 600 aa25.84■■□□□ 1.73
TRIM47-205ENST00000587774 ARXQ96QS3 562 aa25.84■■□□□ 1.73
TRIM47-205ENST00000587774 SYT17Q9BSW7 474 aa25.84■■□□□ 1.73
TRIM47-205ENST00000587774 EIF4A2Q14240 407 aaKnown RBP25.83■■□□□ 1.73
TRIM47-205ENST00000587774 MPRIPQ6WCQ1 1025 aa25.83■■□□□ 1.73
TRIM47-205ENST00000587774 MAP3K5Q99683 1374 aa25.82■■□□□ 1.72
TRIM47-205ENST00000587774 SLC16A10Q8TF71 515 aa25.82■■□□□ 1.72
TRIM47-205ENST00000587774 SPG7Q9UQ90 795 aa25.82■■□□□ 1.72
TRIM47-205ENST00000587774 COL5A3P25940 1745 aaPredicted RBP25.82■■□□□ 1.72
TRIM47-205ENST00000587774 SCN11AQ9UI33 1791 aa25.82■■□□□ 1.72
TRIM47-205ENST00000587774 ZNF831Q5JPB2 1677 aa25.81■■□□□ 1.72
TRIM47-205ENST00000587774 YY1P25490 414 aa25.81■■□□□ 1.72
TRIM47-205ENST00000587774 NKX1-1Q15270 411 aaPredicted RBP25.79■■□□□ 1.72
TRIM47-205ENST00000587774 PLEKHG2Q9H7P9 1386 aa25.79■■□□□ 1.72
TRIM47-205ENST00000587774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.78■■□□□ 1.72
TRIM47-205ENST00000587774 IGSF1Q8N6C5 1336 aa25.78■■□□□ 1.72
TRIM47-205ENST00000587774 PHKG2P15735 406 aa25.75■■□□□ 1.71
TRIM47-205ENST00000587774 POLD1P28340 1107 aa25.75■■□□□ 1.71
TRIM47-205ENST00000587774 PIGBQ92521 554 aa25.75■■□□□ 1.71
TRIM47-205ENST00000587774 COL23A1Q86Y22 540 aaPredicted RBP25.74■■□□□ 1.71
TRIM47-205ENST00000587774 KIF7Q2M1P5 1343 aa25.73■■□□□ 1.71
TRIM47-205ENST00000587774 MORC1Q86VD1 984 aa25.73■■□□□ 1.71
TRIM47-205ENST00000587774 IFNL2Q8IZJ0 200 aa25.73■■□□□ 1.71
TRIM47-205ENST00000587774 SMARCC1Q92922 1105 aaPredicted RBP25.73■■□□□ 1.71
TRIM47-205ENST00000587774 MSH5O43196 834 aa25.72■■□□□ 1.71
TRIM47-205ENST00000587774 C4AP0C0L4 1744 aa25.71■■□□□ 1.71
TRIM47-205ENST00000587774 KLHL34Q8N239 644 aa25.71■■□□□ 1.71
TRIM47-205ENST00000587774 TMOD3Q9NYL9 352 aa25.71■■□□□ 1.71
TRIM47-205ENST00000587774 KNSTRNQ9Y448 316 aa25.71■■□□□ 1.71
TRIM47-205ENST00000587774 MYH14Q7Z406 1995 aaKnown RBP25.71■■□□□ 1.71
TRIM47-205ENST00000587774 KDM6AO15550 1401 aaPredicted RBP25.68■■□□□ 1.7
TRIM47-205ENST00000587774 CICQ96RK0 1608 aaPredicted RBP25.67■■□□□ 1.7
TRIM47-205ENST00000587774 HMGB2P26583 209 aaKnown RBP25.67■■□□□ 1.7
TRIM47-205ENST00000587774 TJP1Q07157 1748 aa25.67■■□□□ 1.7
TRIM47-205ENST00000587774 AMER1Q5JTC6 1135 aaPredicted RBP25.67■■□□□ 1.7
TRIM47-205ENST00000587774 MSL1Q68DK7 614 aa25.67■■□□□ 1.7
TRIM47-205ENST00000587774 LOC102724428A0A0B4J2F2 783 aa25.66■■□□□ 1.7
TRIM47-205ENST00000587774 SIK1P57059 783 aa25.66■■□□□ 1.7
TRIM47-205ENST00000587774 AMIGO3Q86WK7 504 aa25.66■■□□□ 1.7
TRIM47-205ENST00000587774 AK7Q96M32 723 aa25.66■■□□□ 1.7
TRIM47-205ENST00000587774 ASAP1Q9ULH1 1129 aa25.66■■□□□ 1.7
TRIM47-205ENST00000587774 AEBP1Q8IUX7 1158 aa25.65■■□□□ 1.7
TRIM47-205ENST00000587774 KDRP35968 1356 aa25.65■■□□□ 1.7
TRIM47-205ENST00000587774 KIF13BQ9NQT8 1826 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms