RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 PRIM1P49642 420 aaKnown RBP22.02■■□□□ 1.12
NCLN-203ENST00000587740 NSD2O96028 1365 aa22.01■■□□□ 1.11
NCLN-203ENST00000587740 TFCP2L1Q9NZI6 479 aa22.01■■□□□ 1.11
NCLN-203ENST00000587740 FBLN1P23142 703 aa22■■□□□ 1.11
NCLN-203ENST00000587740 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
NCLN-203ENST00000587740 SYTL4Q96C24 671 aaPredicted RBP22■■□□□ 1.11
NCLN-203ENST00000587740 LY75O60449 1722 aa22■■□□□ 1.11
NCLN-203ENST00000587740 CEP350Q5VT06 3117 aa22■■□□□ 1.11
NCLN-203ENST00000587740 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
NCLN-203ENST00000587740 TERF2IPQ9NYB0 399 aa21.99■■□□□ 1.11
NCLN-203ENST00000587740 DOT1LQ8TEK3 1739 aa21.99■■□□□ 1.11
NCLN-203ENST00000587740 SHANK3Q9BYB0 1731 aa21.98■■□□□ 1.11
NCLN-203ENST00000587740 FAM208AQ9UK61 1670 aaKnown RBP21.98■■□□□ 1.11
NCLN-203ENST00000587740 RGPD2P0DJD1 1756 aa21.97■■□□□ 1.11
NCLN-203ENST00000587740 GIGYF1O75420 1035 aaPredicted RBP21.97■■□□□ 1.11
NCLN-203ENST00000587740 YBX3P16989 372 aaKnown RBP eCLIP21.97■■□□□ 1.11
NCLN-203ENST00000587740 MAP3K19Q56UN5 1328 aa21.97■■□□□ 1.11
NCLN-203ENST00000587740 HOXC9P31274 260 aa21.96■■□□□ 1.11
NCLN-203ENST00000587740 PUS7Q96PZ0 661 aaKnown RBP21.95■■□□□ 1.1
NCLN-203ENST00000587740 MEGF6O75095 1541 aa21.95■■□□□ 1.1
NCLN-203ENST00000587740 COL23A1Q86Y22 540 aaPredicted RBP21.94■■□□□ 1.1
NCLN-203ENST00000587740 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
NCLN-203ENST00000587740 CCNL1Q9UK58 526 aaPredicted RBP21.94■■□□□ 1.1
NCLN-203ENST00000587740 AMPHP49418 695 aa21.91■■□□□ 1.1
NCLN-203ENST00000587740 COG3Q96JB2 828 aa21.91■■□□□ 1.1
NCLN-203ENST00000587740 MSH5O43196 834 aa21.89■■□□□ 1.09
NCLN-203ENST00000587740 NBPF6Q5VWK0 638 aa21.89■■□□□ 1.09
NCLN-203ENST00000587740 MSL1Q68DK7 614 aa21.89■■□□□ 1.09
NCLN-203ENST00000587740 NBPF4Q96M43 638 aa21.89■■□□□ 1.09
NCLN-203ENST00000587740 TESK2Q96S53 571 aa21.89■■□□□ 1.09
NCLN-203ENST00000587740 GRIN3BO60391 1043 aa21.88■■□□□ 1.09
NCLN-203ENST00000587740 USP47Q96K76 1375 aa21.87■■□□□ 1.09
NCLN-203ENST00000587740 USHBP1Q8N6Y0 703 aa21.87■■□□□ 1.09
NCLN-203ENST00000587740 RRS1Q15050 365 aaKnown RBP21.86■■□□□ 1.09
NCLN-203ENST00000587740 ST20-MTHFSA0A0A6YYL1 179 aa21.84■■□□□ 1.09
NCLN-203ENST00000587740 ATP10DQ9P241 1426 aa21.83■■□□□ 1.09
NCLN-203ENST00000587740 IFFO2Q5TF58 517 aa21.83■■□□□ 1.09
NCLN-203ENST00000587740 RTL1A6NKG5 1358 aa21.83■■□□□ 1.08
NCLN-203ENST00000587740 C5P01031 1676 aa21.82■■□□□ 1.08
NCLN-203ENST00000587740 TAF1LQ8IZX4 1826 aa21.82■■□□□ 1.08
NCLN-203ENST00000587740 CGNL1Q0VF96 1302 aa21.81■■□□□ 1.08
NCLN-203ENST00000587740 FYB1O15117 783 aa21.81■■□□□ 1.08
NCLN-203ENST00000587740 CD2APQ9Y5K6 639 aa21.81■■□□□ 1.08
NCLN-203ENST00000587740 SLC24A1O60721 1099 aa21.8■■□□□ 1.08
NCLN-203ENST00000587740 AMIGO3Q86WK7 504 aa21.8■■□□□ 1.08
NCLN-203ENST00000587740 RAPGEF4Q8WZA2 1011 aa21.8■■□□□ 1.08
NCLN-203ENST00000587740 GGNBP2Q9H3C7 697 aa21.8■■□□□ 1.08
NCLN-203ENST00000587740 PALLDQ8WX93 1383 aa21.78■■□□□ 1.08
NCLN-203ENST00000587740 CYP27B1O15528 508 aa21.78■■□□□ 1.08
NCLN-203ENST00000587740 TATP17735 454 aaPredicted RBP21.78■■□□□ 1.08
NCLN-203ENST00000587740 HSP90AB2PQ58FF8 381 aa21.78■■□□□ 1.08
NCLN-203ENST00000587740 ADCY9O60503 1353 aa21.77■■□□□ 1.08
NCLN-203ENST00000587740 EIF4G2P78344 907 aaKnown RBP eCLIP21.77■■□□□ 1.08
NCLN-203ENST00000587740 MPRIPQ6WCQ1 1025 aa21.77■■□□□ 1.08
NCLN-203ENST00000587740 SMIM5Q71RC9 77 aa21.77■■□□□ 1.08
NCLN-203ENST00000587740 FLAD1Q8NFF5 587 aa21.76■■□□□ 1.07
NCLN-203ENST00000587740 TOGARAM1Q9Y4F4 1720 aa21.76■■□□□ 1.07
NCLN-203ENST00000587740 PCDH11XQ9BZA7 1347 aa21.76■■□□□ 1.07
NCLN-203ENST00000587740 PCDH11YQ9BZA8 1340 aa21.76■■□□□ 1.07
NCLN-203ENST00000587740 ITGB4P16144 1822 aa21.75■■□□□ 1.07
NCLN-203ENST00000587740 C4BP0C0L5 1744 aa21.75■■□□□ 1.07
NCLN-203ENST00000587740 INSRP06213 1382 aa21.74■■□□□ 1.07
NCLN-203ENST00000587740 GPBP1L1Q9HC44 474 aaPredicted RBP21.74■■□□□ 1.07
NCLN-203ENST00000587740 SMG6Q86US8 1419 aaKnown RBP21.73■■□□□ 1.07
NCLN-203ENST00000587740 TMF1P82094 1093 aa21.73■■□□□ 1.07
NCLN-203ENST00000587740 UBR3Q6ZT12 1888 aa21.73■■□□□ 1.07
NCLN-203ENST00000587740 HSPA5P11021 654 aaKnown RBP21.72■■□□□ 1.07
NCLN-203ENST00000587740 ZNF526Q8TF50 670 aaPredicted RBP21.72■■□□□ 1.07
NCLN-203ENST00000587740 WWC3Q9ULE0 1092 aa21.72■■□□□ 1.07
NCLN-203ENST00000587740 PIGBQ92521 554 aa21.71■■□□□ 1.07
NCLN-203ENST00000587740 IGSF1Q8N6C5 1336 aa21.71■■□□□ 1.07
NCLN-203ENST00000587740 PHF14O94880 888 aa21.7■■□□□ 1.06
NCLN-203ENST00000587740 AK7Q96M32 723 aa21.7■■□□□ 1.06
NCLN-203ENST00000587740 MAP2P11137 1827 aaKnown RBP21.7■■□□□ 1.06
NCLN-203ENST00000587740 FLT4P35916 1363 aa21.7■■□□□ 1.06
NCLN-203ENST00000587740 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.69■■□□□ 1.06
NCLN-203ENST00000587740 HSPA6P17066 643 aa21.69■■□□□ 1.06
NCLN-203ENST00000587740 SMARCC1Q92922 1105 aaPredicted RBP21.69■■□□□ 1.06
NCLN-203ENST00000587740 HMGB2P26583 209 aaKnown RBP21.68■■□□□ 1.06
NCLN-203ENST00000587740 PKD1L3Q7Z443 1732 aa21.68■■□□□ 1.06
NCLN-203ENST00000587740 KIF24Q5T7B8 1368 aa21.67■■□□□ 1.06
NCLN-203ENST00000587740 NKX1-1Q15270 411 aaPredicted RBP21.67■■□□□ 1.06
NCLN-203ENST00000587740 CDCA8Q53HL2 280 aa21.67■■□□□ 1.06
NCLN-203ENST00000587740 LINC00116Q8NCU8 138 aa21.67■■□□□ 1.06
NCLN-203ENST00000587740 NCAPD2Q15021 1401 aa21.66■■□□□ 1.06
NCLN-203ENST00000587740 EMILIN1Q9Y6C2 1016 aa21.66■■□□□ 1.06
NCLN-203ENST00000587740 KIF20BQ96Q89 1820 aa21.66■■□□□ 1.06
NCLN-203ENST00000587740 LOC102724428A0A0B4J2F2 783 aa21.65■■□□□ 1.06
NCLN-203ENST00000587740 SIK1P57059 783 aa21.65■■□□□ 1.06
NCLN-203ENST00000587740 KIF3CO14782 793 aa21.64■■□□□ 1.05
NCLN-203ENST00000587740 SSFA2P28290 1259 aa21.64■■□□□ 1.05
NCLN-203ENST00000587740 ZEB1P37275 1124 aaPredicted RBP21.64■■□□□ 1.05
NCLN-203ENST00000587740 ITPK1Q13572 414 aa21.64■■□□□ 1.05
NCLN-203ENST00000587740 CARD14Q9BXL6 1004 aa21.64■■□□□ 1.05
NCLN-203ENST00000587740 ASAP1Q9ULH1 1129 aa21.63■■□□□ 1.05
NCLN-203ENST00000587740 NSD3Q9BZ95 1437 aa21.62■■□□□ 1.05
NCLN-203ENST00000587740 GNPATO15228 680 aa21.59■■□□□ 1.05
NCLN-203ENST00000587740 EYA1Q99502 592 aa21.59■■□□□ 1.05
NCLN-203ENST00000587740 SPG7Q9UQ90 795 aa21.59■■□□□ 1.05
NCLN-203ENST00000587740 CICQ96RK0 1608 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms