RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 SPATA31A1Q5TZJ5 1347 aa13.62□□□□□ -0.23
CLPTM1-207ENST00000587537 SPATA31A5Q5VU36 1347 aa13.62□□□□□ -0.23
CLPTM1-207ENST00000587537 ZBED9Q6R2W3 1325 aa13.62□□□□□ -0.23
CLPTM1-207ENST00000587537 SPATA31A7Q8IWB4 1347 aa13.62□□□□□ -0.23
CLPTM1-207ENST00000587537 PKD1L3Q7Z443 1732 aa13.61□□□□□ -0.23
CLPTM1-207ENST00000587537 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLPTM1-207ENST00000587537 CALD1Q05682 793 aaKnown RBP13.61□□□□□ -0.23
CLPTM1-207ENST00000587537 NFE2L2Q16236 605 aa13.61□□□□□ -0.23
CLPTM1-207ENST00000587537 AEBP1Q8IUX7 1158 aa13.61□□□□□ -0.23
CLPTM1-207ENST00000587537 TRPC5Q9UL62 973 aaPredicted RBP13.61□□□□□ -0.23
CLPTM1-207ENST00000587537 AFF2P51816 1311 aa13.61□□□□□ -0.23
CLPTM1-207ENST00000587537 ATRNO75882 1429 aa13.6□□□□□ -0.23
CLPTM1-207ENST00000587537 PDE3BQ13370 1112 aa13.6□□□□□ -0.23
CLPTM1-207ENST00000587537 APAF1O14727 1248 aa13.59□□□□□ -0.23
CLPTM1-207ENST00000587537 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
CLPTM1-207ENST00000587537 TMPOP42166 694 aaKnown RBP13.59□□□□□ -0.23
CLPTM1-207ENST00000587537 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
CLPTM1-207ENST00000587537 DISP2A7MBM2 1401 aa13.58□□□□□ -0.24
CLPTM1-207ENST00000587537 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
CLPTM1-207ENST00000587537 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
CLPTM1-207ENST00000587537 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
CLPTM1-207ENST00000587537 RIPK4P57078 832 aa13.57□□□□□ -0.24
CLPTM1-207ENST00000587537 AKAP4Q5JQC9 854 aa13.57□□□□□ -0.24
CLPTM1-207ENST00000587537 C1orf141Q5JVX7 400 aa13.57□□□□□ -0.24
CLPTM1-207ENST00000587537 CCDC9Q9Y3X0 531 aaKnown RBP13.57□□□□□ -0.24
CLPTM1-207ENST00000587537 MEGF6O75095 1541 aa13.57□□□□□ -0.24
CLPTM1-207ENST00000587537 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
CLPTM1-207ENST00000587537 DLG5Q8TDM6 1919 aa13.56□□□□□ -0.24
CLPTM1-207ENST00000587537 GNAT3A8MTJ3 354 aa13.56□□□□□ -0.24
CLPTM1-207ENST00000587537 WDR63Q8IWG1 891 aa13.56□□□□□ -0.24
CLPTM1-207ENST00000587537 ZCRB1Q8TBF4 217 aaKnown RBP13.56□□□□□ -0.24
CLPTM1-207ENST00000587537 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
CLPTM1-207ENST00000587537 GJD4Q96KN9 370 aaPredicted RBP13.56□□□□□ -0.24
CLPTM1-207ENST00000587537 PHACTR3Q96KR7 559 aa13.56□□□□□ -0.24
CLPTM1-207ENST00000587537 IL16Q14005 1332 aa13.56□□□□□ -0.24
CLPTM1-207ENST00000587537 TNS2Q63HR2 1409 aa13.56□□□□□ -0.24
CLPTM1-207ENST00000587537 MTHFSDQ2M296 383 aaKnown RBP13.55□□□□□ -0.24
CLPTM1-207ENST00000587537 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
CLPTM1-207ENST00000587537 IFNL2Q8IZJ0 200 aa13.55□□□□□ -0.24
CLPTM1-207ENST00000587537 EXOC5O00471 708 aa13.54□□□□□ -0.24
CLPTM1-207ENST00000587537 ONECUT3O60422 494 aaPredicted RBP13.54□□□□□ -0.24
CLPTM1-207ENST00000587537 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
CLPTM1-207ENST00000587537 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
CLPTM1-207ENST00000587537 QTRT2Q9H974 415 aaKnown RBP13.53□□□□□ -0.24
CLPTM1-207ENST00000587537 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
CLPTM1-207ENST00000587537 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
CLPTM1-207ENST00000587537 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
CLPTM1-207ENST00000587537 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
CLPTM1-207ENST00000587537 GOLGA2Q08379 1002 aa13.52□□□□□ -0.25
CLPTM1-207ENST00000587537 NKX1-1Q15270 411 aaPredicted RBP13.52□□□□□ -0.25
CLPTM1-207ENST00000587537 DDB1Q16531 1140 aa13.52□□□□□ -0.25
CLPTM1-207ENST00000587537 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
CLPTM1-207ENST00000587537 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.25
CLPTM1-207ENST00000587537 GLI3P10071 1580 aa13.52□□□□□ -0.25
CLPTM1-207ENST00000587537 LRRC37A3O60309 1634 aa13.52□□□□□ -0.25
CLPTM1-207ENST00000587537 SHANK3Q9BYB0 1731 aa13.51□□□□□ -0.25
CLPTM1-207ENST00000587537 CEMIPQ8WUJ3 1361 aa13.51□□□□□ -0.25
CLPTM1-207ENST00000587537 E9PSI1 815 aa13.51□□□□□ -0.25
CLPTM1-207ENST00000587537 PHKG2P15735 406 aa13.51□□□□□ -0.25
CLPTM1-207ENST00000587537 RBM6P78332 1123 aaKnown RBP13.51□□□□□ -0.25
CLPTM1-207ENST00000587537 NEUROD2Q15784 382 aa13.51□□□□□ -0.25
CLPTM1-207ENST00000587537 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
CLPTM1-207ENST00000587537 SCN11AQ9UI33 1791 aa13.5□□□□□ -0.25
CLPTM1-207ENST00000587537 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
CLPTM1-207ENST00000587537 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
CLPTM1-207ENST00000587537 CENPBP07199 599 aaPredicted RBP13.49□□□□□ -0.25
CLPTM1-207ENST00000587537 GNAI1P63096 354 aa13.49□□□□□ -0.25
CLPTM1-207ENST00000587537 IFT57Q9NWB7 429 aa13.49□□□□□ -0.25
CLPTM1-207ENST00000587537 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
CLPTM1-207ENST00000587537 BCL9O00512 1426 aa13.48□□□□□ -0.25
CLPTM1-207ENST00000587537 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
CLPTM1-207ENST00000587537 CYP27B1O15528 508 aa13.48□□□□□ -0.25
CLPTM1-207ENST00000587537 FAM98CQ17RN3 349 aaKnown RBP13.48□□□□□ -0.25
CLPTM1-207ENST00000587537 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
CLPTM1-207ENST00000587537 MRC1P22897 1456 aa13.48□□□□□ -0.25
CLPTM1-207ENST00000587537 RXRBP28702 533 aa13.47□□□□□ -0.25
CLPTM1-207ENST00000587537 TEFQ10587 303 aa13.47□□□□□ -0.25
CLPTM1-207ENST00000587537 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
CLPTM1-207ENST00000587537 CHMP4AQ9BY43 222 aa13.47□□□□□ -0.25
CLPTM1-207ENST00000587537 SOS1Q07889 1333 aaPredicted RBP13.46□□□□□ -0.25
CLPTM1-207ENST00000587537 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
CLPTM1-207ENST00000587537 SIPA1L3O60292 1781 aaPredicted RBP13.45□□□□□ -0.26
CLPTM1-207ENST00000587537 A0A0G2JS52 829 aa13.45□□□□□ -0.26
CLPTM1-207ENST00000587537 CT47B1P0C2W7 299 aaPredicted RBP13.45□□□□□ -0.26
CLPTM1-207ENST00000587537 MYT1Q01538 1121 aa13.45□□□□□ -0.26
CLPTM1-207ENST00000587537 SLFN5Q08AF3 891 aa13.45□□□□□ -0.26
CLPTM1-207ENST00000587537 TAF7Q15545 349 aaPredicted RBP13.45□□□□□ -0.26
CLPTM1-207ENST00000587537 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
CLPTM1-207ENST00000587537 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
CLPTM1-207ENST00000587537 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
CLPTM1-207ENST00000587537 MCM10Q7L590 875 aa13.44□□□□□ -0.26
CLPTM1-207ENST00000587537 TRMT2AQ8IZ69 625 aaKnown RBP13.44□□□□□ -0.26
CLPTM1-207ENST00000587537 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
CLPTM1-207ENST00000587537 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
CLPTM1-207ENST00000587537 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
CLPTM1-207ENST00000587537 CHL1O00533 1208 aa13.43□□□□□ -0.26
CLPTM1-207ENST00000587537 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
CLPTM1-207ENST00000587537 SEPT12Q8IYM1 358 aa13.43□□□□□ -0.26
CLPTM1-207ENST00000587537 ZNF428Q96B54 188 aa13.43□□□□□ -0.26
CLPTM1-207ENST00000587537 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms