RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

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Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 USHBP1Q8N6Y0 703 aa32.01■■■□□ 2.71
LSM7-204ENST00000587502 POLKQ9UBT6 870 aa32.01■■■□□ 2.71
LSM7-204ENST00000587502 KAT6BQ8WYB5 2073 aa32.01■■■□□ 2.71
LSM7-204ENST00000587502 ANKRD26Q9UPS8 1709 aa32■■■□□ 2.71
LSM7-204ENST00000587502 TXNRD1Q16881 649 aa32■■■□□ 2.71
LSM7-204ENST00000587502 PROM2Q8N271 834 aa32■■■□□ 2.71
LSM7-204ENST00000587502 MAP2P11137 1827 aaKnown RBP32■■■□□ 2.71
LSM7-204ENST00000587502 KNSTRNQ9Y448 316 aa31.99■■■□□ 2.71
LSM7-204ENST00000587502 TNNT2P45379 298 aaPredicted RBP31.96■■■□□ 2.71
LSM7-204ENST00000587502 KIF7Q2M1P5 1343 aa31.96■■■□□ 2.71
LSM7-204ENST00000587502 MORC1Q86VD1 984 aa31.92■■■□□ 2.7
LSM7-204ENST00000587502 PCDH11XQ9BZA7 1347 aa31.92■■■□□ 2.7
LSM7-204ENST00000587502 PCDH11YQ9BZA8 1340 aa31.92■■■□□ 2.7
LSM7-204ENST00000587502 BTAF1O14981 1849 aa31.91■■■□□ 2.7
LSM7-204ENST00000587502 STK32BQ9NY57 414 aa31.91■■■□□ 2.7
LSM7-204ENST00000587502 NCAPD2Q15021 1401 aa31.91■■■□□ 2.7
LSM7-204ENST00000587502 SHANK3Q9BYB0 1731 aa31.9■■■□□ 2.7
LSM7-204ENST00000587502 PRIM1P49642 420 aaKnown RBP31.9■■■□□ 2.7
LSM7-204ENST00000587502 SYTL4Q96C24 671 aaPredicted RBP31.9■■■□□ 2.7
LSM7-204ENST00000587502 ANO8Q9HCE9 1232 aaPredicted RBP31.9■■■□□ 2.7
LSM7-204ENST00000587502 EYA1Q99502 592 aa31.89■■■□□ 2.7
LSM7-204ENST00000587502 EIF4A2Q14240 407 aaKnown RBP31.85■■■□□ 2.69
LSM7-204ENST00000587502 SLC15A2Q16348 729 aa31.85■■■□□ 2.69
LSM7-204ENST00000587502 SLC27A3Q5K4L6 730 aa31.85■■■□□ 2.69
LSM7-204ENST00000587502 SPON1Q9HCB6 807 aa31.85■■■□□ 2.69
LSM7-204ENST00000587502 SPG7Q9UQ90 795 aa31.85■■■□□ 2.69
LSM7-204ENST00000587502 DOT1LQ8TEK3 1739 aa31.83■■■□□ 2.69
LSM7-204ENST00000587502 AMER1Q5JTC6 1135 aaPredicted RBP31.83■■■□□ 2.69
LSM7-204ENST00000587502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.83■■■□□ 2.69
LSM7-204ENST00000587502 PLEKHG2Q9H7P9 1386 aa31.81■■■□□ 2.68
LSM7-204ENST00000587502 CYP27B1O15528 508 aa31.79■■■□□ 2.68
LSM7-204ENST00000587502 PKD1L3Q7Z443 1732 aa31.78■■■□□ 2.68
LSM7-204ENST00000587502 LRRC4BQ9NT99 713 aa31.77■■■□□ 2.68
LSM7-204ENST00000587502 IGSF1Q8N6C5 1336 aa31.76■■■□□ 2.68
LSM7-204ENST00000587502 PER1O15534 1290 aaPredicted RBP31.76■■■□□ 2.67
LSM7-204ENST00000587502 HMGB2P26583 209 aaKnown RBP31.76■■■□□ 2.67
LSM7-204ENST00000587502 NKX1-1Q15270 411 aaPredicted RBP31.76■■■□□ 2.67
LSM7-204ENST00000587502 CASZ1Q86V15 1759 aa31.74■■■□□ 2.67
LSM7-204ENST00000587502 PPP1R1BQ9UD71 204 aaPredicted RBP31.74■■■□□ 2.67
LSM7-204ENST00000587502 PAPPAQ13219 1627 aa31.74■■■□□ 2.67
LSM7-204ENST00000587502 IFNL2Q8IZJ0 200 aa31.72■■■□□ 2.67
LSM7-204ENST00000587502 MPRIPQ6WCQ1 1025 aa31.7■■■□□ 2.67
LSM7-204ENST00000587502 CCNL1Q9UK58 526 aaPredicted RBP31.7■■■□□ 2.67
LSM7-204ENST00000587502 LY75O60449 1722 aa31.69■■■□□ 2.66
LSM7-204ENST00000587502 AKT1S1Q96B36 256 aa31.69■■■□□ 2.66
LSM7-204ENST00000587502 PDGFDQ9GZP0 370 aaPredicted RBP31.69■■■□□ 2.66
LSM7-204ENST00000587502 NPC1L1Q9UHC9 1359 aa31.68■■■□□ 2.66
LSM7-204ENST00000587502 ZBTB7AO95365 584 aa31.68■■■□□ 2.66
LSM7-204ENST00000587502 ZNF827Q17R98 1081 aa31.68■■■□□ 2.66
LSM7-204ENST00000587502 SMARCC1Q92922 1105 aaPredicted RBP31.68■■■□□ 2.66
LSM7-204ENST00000587502 PHKG2P15735 406 aa31.67■■■□□ 2.66
LSM7-204ENST00000587502 MTFR1LQ9H019 292 aa31.67■■■□□ 2.66
LSM7-204ENST00000587502 AMOTQ4VCS5 1084 aa31.66■■■□□ 2.66
LSM7-204ENST00000587502 PLEKHO1Q53GL0 409 aaPredicted RBP31.66■■■□□ 2.66
LSM7-204ENST00000587502 CC2D1BQ5T0F9 858 aaKnown RBP31.66■■■□□ 2.66
LSM7-204ENST00000587502 HSP90AB1P08238 724 aaKnown RBP31.64■■■□□ 2.66
LSM7-204ENST00000587502 IL13P35225 146 aa31.64■■■□□ 2.66
LSM7-204ENST00000587502 MTHFSP49914 203 aa31.64■■■□□ 2.66
LSM7-204ENST00000587502 TFCP2L1Q9NZI6 479 aa31.63■■■□□ 2.65
LSM7-204ENST00000587502 PALLDQ8WX93 1383 aa31.63■■■□□ 2.65
LSM7-204ENST00000587502 KCNQ4P56696 695 aa31.62■■■□□ 2.65
LSM7-204ENST00000587502 PIGBQ92521 554 aa31.62■■■□□ 2.65
LSM7-204ENST00000587502 ATF5Q9Y2D1 282 aaPredicted RBP31.62■■■□□ 2.65
LSM7-204ENST00000587502 ITGB4P16144 1822 aa31.61■■■□□ 2.65
LSM7-204ENST00000587502 TOGARAM1Q9Y4F4 1720 aa31.61■■■□□ 2.65
LSM7-204ENST00000587502 SLC16A10Q8TF71 515 aa31.61■■■□□ 2.65
LSM7-204ENST00000587502 TMOD3Q9NYL9 352 aa31.61■■■□□ 2.65
LSM7-204ENST00000587502 SULT6B1Q6IMI4 303 aa31.6■■■□□ 2.65
LSM7-204ENST00000587502 QSER1Q2KHR3 1735 aa31.59■■■□□ 2.65
LSM7-204ENST00000587502 PTGER2P43116 358 aa31.59■■■□□ 2.65
LSM7-204ENST00000587502 KDRP35968 1356 aa31.58■■■□□ 2.65
LSM7-204ENST00000587502 AEBP1Q8IUX7 1158 aa31.57■■■□□ 2.64
LSM7-204ENST00000587502 DCAF5Q96JK2 942 aa31.57■■■□□ 2.64
LSM7-204ENST00000587502 ERVV-2B6SEH9 535 aa31.56■■■□□ 2.64
LSM7-204ENST00000587502 ZNF530Q6P9A1 599 aaPredicted RBP31.56■■■□□ 2.64
LSM7-204ENST00000587502 PNPLA7Q6ZV29 1317 aa31.54■■■□□ 2.64
LSM7-204ENST00000587502 C1orf141Q5JVX7 400 aa31.54■■■□□ 2.64
LSM7-204ENST00000587502 DIAPH1O60610 1272 aaKnown RBP31.53■■■□□ 2.64
LSM7-204ENST00000587502 SGIP1Q9BQI5 828 aa31.52■■■□□ 2.64
LSM7-204ENST00000587502 DCAF8L1A6NGE4 600 aa31.5■■■□□ 2.63
LSM7-204ENST00000587502 FLAD1Q8NFF5 587 aa31.5■■■□□ 2.63
LSM7-204ENST00000587502 C5P01031 1676 aa31.5■■■□□ 2.63
LSM7-204ENST00000587502 LOC102724428A0A0B4J2F2 783 aa31.49■■■□□ 2.63
LSM7-204ENST00000587502 SIK1P57059 783 aa31.49■■■□□ 2.63
LSM7-204ENST00000587502 CNGB1Q14028 1251 aaPredicted RBP31.49■■■□□ 2.63
LSM7-204ENST00000587502 ARXQ96QS3 562 aa31.48■■■□□ 2.63
LSM7-204ENST00000587502 ASAP1Q9ULH1 1129 aa31.48■■■□□ 2.63
LSM7-204ENST00000587502 POLD1P28340 1107 aa31.47■■■□□ 2.63
LSM7-204ENST00000587502 CABP4P57796 275 aa31.46■■■□□ 2.63
LSM7-204ENST00000587502 ATG3Q9NT62 314 aa31.46■■■□□ 2.63
LSM7-204ENST00000587502 TUBGCP6Q96RT7 1819 aa31.46■■■□□ 2.63
LSM7-204ENST00000587502 TAF1LQ8IZX4 1826 aa31.45■■■□□ 2.63
LSM7-204ENST00000587502 MSH5O43196 834 aa31.45■■■□□ 2.63
LSM7-204ENST00000587502 AK7Q96M32 723 aa31.45■■■□□ 2.63
LSM7-204ENST00000587502 AKAP4Q5JQC9 854 aa31.44■■■□□ 2.62
LSM7-204ENST00000587502 KDM6AO15550 1401 aaPredicted RBP31.43■■■□□ 2.62
LSM7-204ENST00000587502 HMOX1P09601 288 aa31.43■■■□□ 2.62
LSM7-204ENST00000587502 COL23A1Q86Y22 540 aaPredicted RBP31.43■■■□□ 2.62
LSM7-204ENST00000587502 FHDC1Q9C0D6 1143 aaPredicted RBP31.42■■■□□ 2.62
LSM7-204ENST00000587502 ZEB1P37275 1124 aaPredicted RBP31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms