RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 PDZRN3Q9UPQ7 1066 aa16.14■□□□□ 0.17
PTPRS-204ENST00000587303 GNAT3A8MTJ3 354 aa16.13■□□□□ 0.17
PTPRS-204ENST00000587303 SSR1P43307 286 aaKnown RBP16.13■□□□□ 0.17
PTPRS-204ENST00000587303 DZIP1Q86YF9 867 aaKnown RBP16.13■□□□□ 0.17
PTPRS-204ENST00000587303 ZNF287Q9HBT7 754 aa16.13■□□□□ 0.17
PTPRS-204ENST00000587303 NUDT16Q96DE0 195 aaKnown RBP16.13■□□□□ 0.17
PTPRS-204ENST00000587303 MKNK2Q9HBH9 465 aa16.13■□□□□ 0.17
PTPRS-204ENST00000587303 ERBINQ96RT1 1412 aa16.13■□□□□ 0.17
PTPRS-204ENST00000587303 FIBPO43427 364 aa16.12■□□□□ 0.17
PTPRS-204ENST00000587303 ANKRD1Q15327 319 aa16.12■□□□□ 0.17
PTPRS-204ENST00000587303 PPP4R3AQ6IN85 833 aa16.12■□□□□ 0.17
PTPRS-204ENST00000587303 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.12■□□□□ 0.17
PTPRS-204ENST00000587303 NESP48681 1621 aa16.12■□□□□ 0.17
PTPRS-204ENST00000587303 ZRSR2Q15696 482 aaKnown RBP16.12■□□□□ 0.17
PTPRS-204ENST00000587303 CAVIN1Q6NZI2 390 aaKnown RBP16.12■□□□□ 0.17
PTPRS-204ENST00000587303 GCC1Q96CN9 775 aa16.12■□□□□ 0.17
PTPRS-204ENST00000587303 CTNNA3Q9UI47 895 aa16.12■□□□□ 0.17
PTPRS-204ENST00000587303 SEC63Q9UGP8 760 aaKnown RBP16.12■□□□□ 0.17
PTPRS-204ENST00000587303 CT47B1P0C2W7 299 aaPredicted RBP16.12■□□□□ 0.17
PTPRS-204ENST00000587303 ME1P48163 572 aa16.12■□□□□ 0.17
PTPRS-204ENST00000587303 CDKL5O76039 1030 aa16.11■□□□□ 0.17
PTPRS-204ENST00000587303 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
PTPRS-204ENST00000587303 SERPINC1P01008 464 aa16.11■□□□□ 0.17
PTPRS-204ENST00000587303 EXOC5O00471 708 aa16.11■□□□□ 0.17
PTPRS-204ENST00000587303 IFIT1P09914 478 aaKnown RBP16.11■□□□□ 0.17
PTPRS-204ENST00000587303 MINDY4BA8MYZ0 360 aa16.1■□□□□ 0.17
PTPRS-204ENST00000587303 PLEKHH2Q8IVE3 1493 aa16.1■□□□□ 0.17
PTPRS-204ENST00000587303 USHBP1Q8N6Y0 703 aa16.1■□□□□ 0.17
PTPRS-204ENST00000587303 LUC7LQ9NQ29 371 aaKnown RBP16.1■□□□□ 0.17
PTPRS-204ENST00000587303 C6orf229H3BNL8 230 aa16.1■□□□□ 0.17
PTPRS-204ENST00000587303 ZNF622Q969S3 477 aaKnown RBP eCLIP16.1■□□□□ 0.172e-7■■□□□ 13.5
PTPRS-204ENST00000587303 ERLIN2O94905 339 aa16.1■□□□□ 0.17
PTPRS-204ENST00000587303 DNAI2Q9GZS0 605 aa16.1■□□□□ 0.17
PTPRS-204ENST00000587303 RBM10P98175 930 aaKnown RBP16.1■□□□□ 0.17
PTPRS-204ENST00000587303 CCDC96Q2M329 555 aa16.1■□□□□ 0.17
PTPRS-204ENST00000587303 DACH1Q9UI36 760 aa16.1■□□□□ 0.17
PTPRS-204ENST00000587303 MCM2P49736 904 aa16.09■□□□□ 0.17
PTPRS-204ENST00000587303 ERCC4Q92889 916 aaPredicted RBP16.09■□□□□ 0.17
PTPRS-204ENST00000587303 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
PTPRS-204ENST00000587303 CCDC181Q5TID7 509 aa16.09■□□□□ 0.17
PTPRS-204ENST00000587303 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
PTPRS-204ENST00000587303 AKNAQ7Z591 1439 aa16.09■□□□□ 0.17
PTPRS-204ENST00000587303 PRPF40AO75400 957 aaKnown RBP16.09■□□□□ 0.17
PTPRS-204ENST00000587303 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
PTPRS-204ENST00000587303 C9orf84Q5VXU9 1444 aa16.09■□□□□ 0.17
PTPRS-204ENST00000587303 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.17
PTPRS-204ENST00000587303 FOXO3O43524 673 aa16.08■□□□□ 0.17
PTPRS-204ENST00000587303 CWC27Q6UX04 472 aaKnown RBP16.08■□□□□ 0.17
PTPRS-204ENST00000587303 PPFIBP1Q86W92 1011 aa16.08■□□□□ 0.17
PTPRS-204ENST00000587303 MYD88Q99836 296 aa16.08■□□□□ 0.17
PTPRS-204ENST00000587303 IL1RAPL2Q9NP60 686 aa16.08■□□□□ 0.17
PTPRS-204ENST00000587303 ANKRD18AQ8IVF6 992 aa16.08■□□□□ 0.16
PTPRS-204ENST00000587303 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
PTPRS-204ENST00000587303 NFKBIBQ15653 356 aa16.07■□□□□ 0.16
PTPRS-204ENST00000587303 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
PTPRS-204ENST00000587303 BRD4O60885 1362 aaPredicted RBP16.07■□□□□ 0.16
PTPRS-204ENST00000587303 WAPLQ7Z5K2 1190 aa16.07■□□□□ 0.16
PTPRS-204ENST00000587303 TAF3Q5VWG9 929 aa16.07■□□□□ 0.16
PTPRS-204ENST00000587303 PSMD1Q99460 953 aa16.07■□□□□ 0.16
PTPRS-204ENST00000587303 CCDC39Q9UFE4 941 aa16.07■□□□□ 0.16
PTPRS-204ENST00000587303 BLOC1S2Q6QNY1 142 aa16.07■□□□□ 0.16
PTPRS-204ENST00000587303 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
PTPRS-204ENST00000587303 RPGRIP1LQ68CZ1 1315 aa16.06■□□□□ 0.16
PTPRS-204ENST00000587303 TTC16Q8NEE8 873 aa16.06■□□□□ 0.16
PTPRS-204ENST00000587303 CUL5Q93034 780 aa16.06■□□□□ 0.16
PTPRS-204ENST00000587303 FEZ1Q99689 392 aa16.06■□□□□ 0.16
PTPRS-204ENST00000587303 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
PTPRS-204ENST00000587303 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
PTPRS-204ENST00000587303 GOLGA6L10A6NI86 522 aa16.06■□□□□ 0.16
PTPRS-204ENST00000587303 NBPF8Q3BBV2 869 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 ZNF444Q8N0Y2 327 aaPredicted RBP16.05■□□□□ 0.16
PTPRS-204ENST00000587303 RABEP1Q15276 862 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 WASF1Q92558 559 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 HFM1A2PYH4 1435 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 CEP57L1Q8IYX8 460 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 UBAP1LF5GYI3 381 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 RFC4P35249 363 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
PTPRS-204ENST00000587303 C16orf71Q8IYS4 520 aaPredicted RBP16.05■□□□□ 0.16
PTPRS-204ENST00000587303 CA8P35219 290 aa16.04■□□□□ 0.16
PTPRS-204ENST00000587303 CEBPAP49715 358 aaPredicted RBP16.04■□□□□ 0.16
PTPRS-204ENST00000587303 POTEJP0CG39 1038 aa16.04■□□□□ 0.16
PTPRS-204ENST00000587303 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
PTPRS-204ENST00000587303 THUMPD2Q9BTF0 503 aaKnown RBP16.04■□□□□ 0.16
PTPRS-204ENST00000587303 LARP1BQ659C4 914 aaKnown RBP16.04■□□□□ 0.16
PTPRS-204ENST00000587303 JAKMIP1Q96N16 626 aaKnown RBP16.04■□□□□ 0.16
PTPRS-204ENST00000587303 IFT140Q96RY7 1462 aa16.04■□□□□ 0.16
PTPRS-204ENST00000587303 PDRG1Q9NUG6 133 aa16.04■□□□□ 0.16
PTPRS-204ENST00000587303 CWC15Q9P013 229 aaKnown RBP16.04■□□□□ 0.16
PTPRS-204ENST00000587303 PHF8Q9UPP1 1060 aa16.04■□□□□ 0.16
PTPRS-204ENST00000587303 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
PTPRS-204ENST00000587303 SLC5A1P13866 664 aa16.04■□□□□ 0.16
PTPRS-204ENST00000587303 TSPY26PQ9H489 355 aa16.04■□□□□ 0.16
PTPRS-204ENST00000587303 LIG1P18858 919 aa16.03■□□□□ 0.16
PTPRS-204ENST00000587303 GPTP24298 496 aa16.03■□□□□ 0.16
PTPRS-204ENST00000587303 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
PTPRS-204ENST00000587303 LEKR1Q6ZMV7 388 aa16.03■□□□□ 0.16
PTPRS-204ENST00000587303 DRC1Q96MC2 740 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms