RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CAMKK2Q96RR4 588 aa20.16■□□□□ 0.82
ATG4D-207ENST00000587256 NCAPD2Q15021 1401 aa20.16■□□□□ 0.82
ATG4D-207ENST00000587256 ACSBG1Q96GR2 724 aa20.15■□□□□ 0.82
ATG4D-207ENST00000587256 NPC1L1Q9UHC9 1359 aa20.15■□□□□ 0.82
ATG4D-207ENST00000587256 RREB1Q92766 1687 aa20.15■□□□□ 0.82
ATG4D-207ENST00000587256 RGPD3A6NKT7 1758 aaPredicted RBP20.15■□□□□ 0.82
ATG4D-207ENST00000587256 RGPD4Q7Z3J3 1758 aa20.15■□□□□ 0.82
ATG4D-207ENST00000587256 PTF1AQ7RTS3 328 aa20.14■□□□□ 0.81
ATG4D-207ENST00000587256 EYA1Q99502 592 aa20.14■□□□□ 0.81
ATG4D-207ENST00000587256 PCDH11XQ9BZA7 1347 aa20.12■□□□□ 0.81
ATG4D-207ENST00000587256 PCDH11YQ9BZA8 1340 aa20.12■□□□□ 0.81
ATG4D-207ENST00000587256 NUP188Q5SRE5 1749 aa20.12■□□□□ 0.81
ATG4D-207ENST00000587256 PKD1L3Q7Z443 1732 aa20.12■□□□□ 0.81
ATG4D-207ENST00000587256 DOT1LQ8TEK3 1739 aa20.12■□□□□ 0.81
ATG4D-207ENST00000587256 KCNQ2O43526 872 aa20.11■□□□□ 0.81
ATG4D-207ENST00000587256 IGSF1Q8N6C5 1336 aa20.1■□□□□ 0.81
ATG4D-207ENST00000587256 BTAF1O14981 1849 aa20.09■□□□□ 0.81
ATG4D-207ENST00000587256 PLSCR1O15162 318 aa20.08■□□□□ 0.81
ATG4D-207ENST00000587256 MTHFSP49914 203 aa20.08■□□□□ 0.81
ATG4D-207ENST00000587256 SYTL4Q96C24 671 aaPredicted RBP20.08■□□□□ 0.81
ATG4D-207ENST00000587256 PSDA5PKW4 1024 aaPredicted RBP20.07■□□□□ 0.8
ATG4D-207ENST00000587256 SPG7Q9UQ90 795 aa20.07■□□□□ 0.8
ATG4D-207ENST00000587256 KAT6BQ8WYB5 2073 aa20.06■□□□□ 0.8
ATG4D-207ENST00000587256 ZEB1P37275 1124 aaPredicted RBP20.06■□□□□ 0.8
ATG4D-207ENST00000587256 R3HDM1Q15032 1099 aaKnown RBP20.05■□□□□ 0.8
ATG4D-207ENST00000587256 PLEKHG2Q9H7P9 1386 aa20.05■□□□□ 0.8
ATG4D-207ENST00000587256 CYP27B1O15528 508 aa20.04■□□□□ 0.8
ATG4D-207ENST00000587256 NBPF14Q5TI25 921 aa20.04■□□□□ 0.8
ATG4D-207ENST00000587256 IL13P35225 146 aa20.03■□□□□ 0.8
ATG4D-207ENST00000587256 PRIM1P49642 420 aaKnown RBP20.03■□□□□ 0.8
ATG4D-207ENST00000587256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.03■□□□□ 0.8
ATG4D-207ENST00000587256 TXNRD1Q16881 649 aa20.02■□□□□ 0.8
ATG4D-207ENST00000587256 AEBP1Q8IUX7 1158 aa20.02■□□□□ 0.8
ATG4D-207ENST00000587256 SULT6B1Q6IMI4 303 aa20.01■□□□□ 0.79
ATG4D-207ENST00000587256 TOGARAM1Q9Y4F4 1720 aa20.01■□□□□ 0.79
ATG4D-207ENST00000587256 COL3A1P02461 1466 aaPredicted RBP20■□□□□ 0.79
ATG4D-207ENST00000587256 DIAPH1O60610 1272 aaKnown RBP20■□□□□ 0.79
ATG4D-207ENST00000587256 KDRP35968 1356 aa19.99■□□□□ 0.79
ATG4D-207ENST00000587256 PLEKHO1Q53GL0 409 aaPredicted RBP19.98■□□□□ 0.79
ATG4D-207ENST00000587256 IFNL2Q8IZJ0 200 aa19.98■□□□□ 0.79
ATG4D-207ENST00000587256 PROM2Q8N271 834 aa19.98■□□□□ 0.79
ATG4D-207ENST00000587256 PHKG2P15735 406 aa19.97■□□□□ 0.79
ATG4D-207ENST00000587256 ZNF530Q6P9A1 599 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-207ENST00000587256 CFAP53Q96M91 514 aa19.97■□□□□ 0.79
ATG4D-207ENST00000587256 ANO8Q9HCE9 1232 aaPredicted RBP19.97■□□□□ 0.79
ATG4D-207ENST00000587256 AMOTQ4VCS5 1084 aa19.96■□□□□ 0.79
ATG4D-207ENST00000587256 MPRIPQ6WCQ1 1025 aa19.96■□□□□ 0.79
ATG4D-207ENST00000587256 HMOX1P09601 288 aa19.95■□□□□ 0.78
ATG4D-207ENST00000587256 PPP2R1AP30153 589 aa19.95■□□□□ 0.78
ATG4D-207ENST00000587256 NKX1-1Q15270 411 aaPredicted RBP19.95■□□□□ 0.78
ATG4D-207ENST00000587256 STK32BQ9NY57 414 aa19.95■□□□□ 0.78
ATG4D-207ENST00000587256 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
ATG4D-207ENST00000587256 U2SURPO15042 1029 aaKnown RBP19.94■□□□□ 0.78
ATG4D-207ENST00000587256 ITGB4P16144 1822 aa19.94■□□□□ 0.78
ATG4D-207ENST00000587256 LRP5O75197 1615 aa19.94■□□□□ 0.78
ATG4D-207ENST00000587256 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
ATG4D-207ENST00000587256 C1orf141Q5JVX7 400 aa19.93■□□□□ 0.78
ATG4D-207ENST00000587256 LY75O60449 1722 aa19.93■□□□□ 0.78
ATG4D-207ENST00000587256 HSP90AB1P08238 724 aaKnown RBP19.92■□□□□ 0.78
ATG4D-207ENST00000587256 SLC27A3Q5K4L6 730 aa19.92■□□□□ 0.78
ATG4D-207ENST00000587256 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
ATG4D-207ENST00000587256 PALLDQ8WX93 1383 aa19.92■□□□□ 0.78
ATG4D-207ENST00000587256 CCNL1Q9UK58 526 aaPredicted RBP19.91■□□□□ 0.78
ATG4D-207ENST00000587256 DCAF5Q96JK2 942 aa19.9■□□□□ 0.78
ATG4D-207ENST00000587256 LRRC4BQ9NT99 713 aa19.9■□□□□ 0.78
ATG4D-207ENST00000587256 KDM6AO15550 1401 aaPredicted RBP19.9■□□□□ 0.78
ATG4D-207ENST00000587256 SLC15A2Q16348 729 aa19.89■□□□□ 0.77
ATG4D-207ENST00000587256 PIGBQ92521 554 aa19.89■□□□□ 0.77
ATG4D-207ENST00000587256 KCNQ4P56696 695 aa19.88■□□□□ 0.77
ATG4D-207ENST00000587256 SMARCC1Q92922 1105 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-207ENST00000587256 NUDCQ9Y266 331 aa19.88■□□□□ 0.77
ATG4D-207ENST00000587256 SRCAPQ6ZRS2 3230 aa19.88■□□□□ 0.77
ATG4D-207ENST00000587256 CASZ1Q86V15 1759 aa19.87■□□□□ 0.77
ATG4D-207ENST00000587256 ZNF827Q17R98 1081 aa19.86■□□□□ 0.77
ATG4D-207ENST00000587256 ERVV-2B6SEH9 535 aa19.85■□□□□ 0.77
ATG4D-207ENST00000587256 C5P01031 1676 aa19.84■□□□□ 0.77
ATG4D-207ENST00000587256 CABP4P57796 275 aa19.84■□□□□ 0.77
ATG4D-207ENST00000587256 AKAP4Q5JQC9 854 aa19.84■□□□□ 0.77
ATG4D-207ENST00000587256 U2AF1L5P0DN76 240 aaPredicted RBP19.83■□□□□ 0.77
ATG4D-207ENST00000587256 U2AF1Q01081 240 aaKnown RBP eCLIP19.83■□□□□ 0.77
ATG4D-207ENST00000587256 RALBP1Q15311 655 aa19.83■□□□□ 0.77
ATG4D-207ENST00000587256 MTHFSDQ2M296 383 aaKnown RBP19.83■□□□□ 0.77
ATG4D-207ENST00000587256 PRKAR2BP31323 418 aa19.82■□□□□ 0.76
ATG4D-207ENST00000587256 AKT1S1Q96B36 256 aa19.82■□□□□ 0.76
ATG4D-207ENST00000587256 ASAP1Q9ULH1 1129 aa19.82■□□□□ 0.76
ATG4D-207ENST00000587256 SCN11AQ9UI33 1791 aa19.82■□□□□ 0.76
ATG4D-207ENST00000587256 PDGFDQ9GZP0 370 aaPredicted RBP19.81■□□□□ 0.76
ATG4D-207ENST00000587256 SPON1Q9HCB6 807 aa19.81■□□□□ 0.76
ATG4D-207ENST00000587256 TFCP2L1Q9NZI6 479 aa19.81■□□□□ 0.76
ATG4D-207ENST00000587256 QSER1Q2KHR3 1735 aa19.8■□□□□ 0.76
ATG4D-207ENST00000587256 ZBTB7AO95365 584 aa19.8■□□□□ 0.76
ATG4D-207ENST00000587256 HMGB2P26583 209 aaKnown RBP19.8■□□□□ 0.76
ATG4D-207ENST00000587256 GAS2L2Q8NHY3 880 aa19.8■□□□□ 0.76
ATG4D-207ENST00000587256 RSPH6AQ9H0K4 717 aa19.8■□□□□ 0.76
ATG4D-207ENST00000587256 ATG3Q9NT62 314 aa19.8■□□□□ 0.76
ATG4D-207ENST00000587256 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
ATG4D-207ENST00000587256 TUBGCP6Q96RT7 1819 aa19.79■□□□□ 0.76
ATG4D-207ENST00000587256 LOC102724428A0A0B4J2F2 783 aa19.79■□□□□ 0.76
ATG4D-207ENST00000587256 SIK1P57059 783 aa19.79■□□□□ 0.76
ATG4D-207ENST00000587256 MAP3K5Q99683 1374 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms