RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 BRWD3Q6RI45 1802 aa8.82□□□□□ -1
NPC1-206ENST00000587223 IL13P35225 146 aa8.81□□□□□ -1
NPC1-206ENST00000587223 SF3B2Q13435 895 aaKnown RBP8.81□□□□□ -1
NPC1-206ENST00000587223 ZCRB1Q8TBF4 217 aaKnown RBP8.81□□□□□ -1
NPC1-206ENST00000587223 DDX54Q8TDD1 881 aaKnown RBP8.81□□□□□ -1
NPC1-206ENST00000587223 U2SURPO15042 1029 aaKnown RBP8.8□□□□□ -1
NPC1-206ENST00000587223 SULT6B1Q6IMI4 303 aa8.8□□□□□ -1
NPC1-206ENST00000587223 MARCH10Q8NA82 808 aaPredicted RBP8.8□□□□□ -1
NPC1-206ENST00000587223 NUDCQ9Y266 331 aa8.8□□□□□ -1
NPC1-206ENST00000587223 U3KPZ7 1027 aaPredicted RBP8.8□□□□□ -1
NPC1-206ENST00000587223 FAM208AQ9UK61 1670 aaKnown RBP8.8□□□□□ -1
NPC1-206ENST00000587223 THSD7AQ9UPZ6 1657 aa8.8□□□□□ -1
NPC1-206ENST00000587223 RGPD2P0DJD1 1756 aa8.8□□□□□ -1
NPC1-206ENST00000587223 DISP2A7MBM2 1401 aa8.8□□□□□ -1
NPC1-206ENST00000587223 PARD3Q8TEW0 1356 aa8.79□□□□□ -1
NPC1-206ENST00000587223 TRIM37O94972 964 aa8.79□□□□□ -1
NPC1-206ENST00000587223 SAMD1Q6SPF0 538 aaPredicted RBP8.79□□□□□ -1
NPC1-206ENST00000587223 RTN4Q9NQC3 1192 aaKnown RBP8.79□□□□□ -1
NPC1-206ENST00000587223 SPG7Q9UQ90 795 aa8.79□□□□□ -1
NPC1-206ENST00000587223 KAT6BQ8WYB5 2073 aa8.79□□□□□ -1
NPC1-206ENST00000587223 IGSF1Q8N6C5 1336 aa8.79□□□□□ -1
NPC1-206ENST00000587223 PARP4Q9UKK3 1724 aaKnown RBP8.78□□□□□ -1
NPC1-206ENST00000587223 HMOX1P09601 288 aa8.78□□□□□ -1
NPC1-206ENST00000587223 PLEKHO1Q53GL0 409 aaPredicted RBP8.78□□□□□ -1
NPC1-206ENST00000587223 AMOTQ4VCS5 1084 aa8.77□□□□□ -1.01
NPC1-206ENST00000587223 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
NPC1-206ENST00000587223 PRKRIP1Q9H875 184 aaPredicted RBP8.77□□□□□ -1.01
NPC1-206ENST00000587223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.77□□□□□ -1.011e-18■□□□□ 10
NPC1-206ENST00000587223 OVOS2A0A0G2JMS6 1433 aa8.77□□□□□ -1.01
NPC1-206ENST00000587223 TNS2Q63HR2 1409 aa8.77□□□□□ -1.01
NPC1-206ENST00000587223 MYBBP1AQ9BQG0 1328 aaKnown RBP8.77□□□□□ -1.01
NPC1-206ENST00000587223 MEGF6O75095 1541 aa8.76□□□□□ -1.01
NPC1-206ENST00000587223 ANP32CO43423 234 aa8.76□□□□□ -1.01
NPC1-206ENST00000587223 APBA3O96018 575 aa8.76□□□□□ -1.01
NPC1-206ENST00000587223 U2AF1L5P0DN76 240 aaPredicted RBP8.76□□□□□ -1.01
NPC1-206ENST00000587223 BAG6P46379 1132 aa8.76□□□□□ -1.01
NPC1-206ENST00000587223 U2AF1Q01081 240 aaKnown RBP eCLIP8.76□□□□□ -1.01
NPC1-206ENST00000587223 ACSBG1Q96GR2 724 aa8.76□□□□□ -1.01
NPC1-206ENST00000587223 PCDH11XQ9BZA7 1347 aa8.76□□□□□ -1.01
NPC1-206ENST00000587223 PCDH11YQ9BZA8 1340 aa8.76□□□□□ -1.01
NPC1-206ENST00000587223 WNK3Q9BYP7 1800 aa8.75□□□□□ -1.01
NPC1-206ENST00000587223 NCAPD2Q15021 1401 aa8.75□□□□□ -1.01
NPC1-206ENST00000587223 CYP27B1O15528 508 aa8.75□□□□□ -1.01
NPC1-206ENST00000587223 DEFB132Q7Z7B7 95 aa8.75□□□□□ -1.01
NPC1-206ENST00000587223 IFNL2Q8IZJ0 200 aa8.75□□□□□ -1.01
NPC1-206ENST00000587223 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
NPC1-206ENST00000587223 BCL11BQ9C0K0 894 aaPredicted RBP8.75□□□□□ -1.01
NPC1-206ENST00000587223 LRRC37A3O60309 1634 aa8.75□□□□□ -1.01
NPC1-206ENST00000587223 KCNQ2O43526 872 aa8.74□□□□□ -1.01
NPC1-206ENST00000587223 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
NPC1-206ENST00000587223 EN1Q05925 392 aaPredicted RBP8.74□□□□□ -1.01
NPC1-206ENST00000587223 ZNF530Q6P9A1 599 aaPredicted RBP8.74□□□□□ -1.01
NPC1-206ENST00000587223 KDRP35968 1356 aa8.73□□□□□ -1.01
NPC1-206ENST00000587223 BCL9O00512 1426 aa8.73□□□□□ -1.01
NPC1-206ENST00000587223 FCHSD2O94868 740 aa8.73□□□□□ -1.01
NPC1-206ENST00000587223 NEFMP07197 916 aa8.73□□□□□ -1.01
NPC1-206ENST00000587223 HSP90AB1P08238 724 aaKnown RBP8.73□□□□□ -1.01
NPC1-206ENST00000587223 PHKG2P15735 406 aa8.73□□□□□ -1.01
NPC1-206ENST00000587223 C1orf141Q5JVX7 400 aa8.73□□□□□ -1.01
NPC1-206ENST00000587223 PTF1AQ7RTS3 328 aa8.73□□□□□ -1.01
NPC1-206ENST00000587223 PNNQ9H307 717 aaKnown RBP8.73□□□□□ -1.01
NPC1-206ENST00000587223 COL3A1P02461 1466 aaPredicted RBP8.72□□□□□ -1.01
NPC1-206ENST00000587223 PRKAR2BP31323 418 aa8.72□□□□□ -1.01
NPC1-206ENST00000587223 NKX1-1Q15270 411 aaPredicted RBP8.72□□□□□ -1.01
NPC1-206ENST00000587223 MPRIPQ6WCQ1 1025 aa8.72□□□□□ -1.01
NPC1-206ENST00000587223 RSPH6AQ9H0K4 717 aa8.72□□□□□ -1.01
NPC1-206ENST00000587223 PLEKHG2Q9H7P9 1386 aa8.72□□□□□ -1.01
NPC1-206ENST00000587223 PLSCR1O15162 318 aa8.71□□□□□ -1.02
NPC1-206ENST00000587223 EZH2Q15910 746 aaKnown RBP8.71□□□□□ -1.02
NPC1-206ENST00000587223 MTHFSDQ2M296 383 aaKnown RBP8.71□□□□□ -1.02
NPC1-206ENST00000587223 AKAP4Q5JQC9 854 aa8.71□□□□□ -1.02
NPC1-206ENST00000587223 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.02
NPC1-206ENST00000587223 DCAF5Q96JK2 942 aa8.71□□□□□ -1.02
NPC1-206ENST00000587223 PHACTR3Q96KR7 559 aa8.71□□□□□ -1.02
NPC1-206ENST00000587223 RGPD1P0DJD0 1748 aa8.71□□□□□ -1.02
NPC1-206ENST00000587223 WDR43Q15061 677 aaKnown RBP eCLIP8.7□□□□□ -1.02
NPC1-206ENST00000587223 CAMKK2Q96RR4 588 aa8.7□□□□□ -1.02
NPC1-206ENST00000587223 SBF2Q86WG5 1849 aa8.7□□□□□ -1.02
NPC1-206ENST00000587223 ERVV-2B6SEH9 535 aa8.69□□□□□ -1.02
NPC1-206ENST00000587223 CABP4P57796 275 aa8.69□□□□□ -1.02
NPC1-206ENST00000587223 TMOD3Q9NYL9 352 aa8.69□□□□□ -1.02
NPC1-206ENST00000587223 PKD1L3Q7Z443 1732 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 GNAT3A8MTJ3 354 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 TXNRD1Q16881 649 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 NFATC2IPQ8NCF5 419 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 PIGBQ92521 554 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 LGR6Q9HBX8 967 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 MRS2Q9HD23 443 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 ADAMTS8Q9UP79 889 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 MAPK8IP3Q9UPT6 1336 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 SHANK3Q9BYB0 1731 aa8.68□□□□□ -1.02
NPC1-206ENST00000587223 RNMTO43148 476 aaKnown RBP8.67□□□□□ -1.02
NPC1-206ENST00000587223 CCDC184Q52MB2 194 aa8.67□□□□□ -1.02
NPC1-206ENST00000587223 NBPF14Q5TI25 921 aa8.67□□□□□ -1.02
NPC1-206ENST00000587223 PROM2Q8N271 834 aa8.67□□□□□ -1.02
NPC1-206ENST00000587223 RTF1Q92541 710 aaKnown RBP8.67□□□□□ -1.02
NPC1-206ENST00000587223 SMARCC1Q92922 1105 aaPredicted RBP8.67□□□□□ -1.02
NPC1-206ENST00000587223 PLEKHF1Q96S99 279 aa8.67□□□□□ -1.02
NPC1-206ENST00000587223 DIEXFQ68CQ4 756 aaKnown RBP8.66□□□□□ -1.02
NPC1-206ENST00000587223 CCDC146Q8IYE0 955 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms