RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 NBPF4Q96M43 638 aa14.72□□□□□ -0.05
ZNF540-205ENST00000587220 INSRP06213 1382 aa14.72□□□□□ -0.05
ZNF540-205ENST00000587220 KIF24Q5T7B8 1368 aa14.72□□□□□ -0.05
ZNF540-205ENST00000587220 HSPA5P11021 654 aaKnown RBP14.71□□□□□ -0.05
ZNF540-205ENST00000587220 MEGF6O75095 1541 aa14.71□□□□□ -0.06
ZNF540-205ENST00000587220 DOT1LQ8TEK3 1739 aa14.7□□□□□ -0.06
ZNF540-205ENST00000587220 TATP17735 454 aaPredicted RBP14.7□□□□□ -0.06
ZNF540-205ENST00000587220 SLC15A2Q16348 729 aa14.69□□□□□ -0.06
ZNF540-205ENST00000587220 EMILIN1Q9Y6C2 1016 aa14.69□□□□□ -0.06
ZNF540-205ENST00000587220 CASZ1Q86V15 1759 aa14.69□□□□□ -0.06
ZNF540-205ENST00000587220 ZBTB7AO95365 584 aa14.68□□□□□ -0.06
ZNF540-205ENST00000587220 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
ZNF540-205ENST00000587220 SHANK3Q9BYB0 1731 aa14.68□□□□□ -0.06
ZNF540-205ENST00000587220 PDGFDQ9GZP0 370 aaPredicted RBP14.67□□□□□ -0.06
ZNF540-205ENST00000587220 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
ZNF540-205ENST00000587220 MAP2P11137 1827 aaKnown RBP14.66□□□□□ -0.06
ZNF540-205ENST00000587220 ANKRD26Q9UPS8 1709 aa14.66□□□□□ -0.06
ZNF540-205ENST00000587220 PCDH11XQ9BZA7 1347 aa14.66□□□□□ -0.06
ZNF540-205ENST00000587220 PCDH11YQ9BZA8 1340 aa14.66□□□□□ -0.06
ZNF540-205ENST00000587220 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
ZNF540-205ENST00000587220 SLC27A3Q5K4L6 730 aa14.65□□□□□ -0.06
ZNF540-205ENST00000587220 PAPPAQ13219 1627 aa14.65□□□□□ -0.06
ZNF540-205ENST00000587220 PANK3Q9H999 370 aa14.64□□□□□ -0.07
ZNF540-205ENST00000587220 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
ZNF540-205ENST00000587220 WASHC2AQ641Q2 1341 aa14.64□□□□□ -0.07
ZNF540-205ENST00000587220 MTFR1LQ9H019 292 aa14.63□□□□□ -0.07
ZNF540-205ENST00000587220 LRRC4BQ9NT99 713 aa14.63□□□□□ -0.07
ZNF540-205ENST00000587220 POLKQ9UBT6 870 aa14.62□□□□□ -0.07
ZNF540-205ENST00000587220 NSD2O96028 1365 aa14.61□□□□□ -0.07
ZNF540-205ENST00000587220 ZNF827Q17R98 1081 aa14.61□□□□□ -0.07
ZNF540-205ENST00000587220 TFCP2L1Q9NZI6 479 aa14.61□□□□□ -0.07
ZNF540-205ENST00000587220 CCNL1Q9UK58 526 aaPredicted RBP14.61□□□□□ -0.07
ZNF540-205ENST00000587220 SPG7Q9UQ90 795 aa14.61□□□□□ -0.07
ZNF540-205ENST00000587220 LY75O60449 1722 aa14.61□□□□□ -0.07
ZNF540-205ENST00000587220 KCNQ4P56696 695 aa14.6□□□□□ -0.07
ZNF540-205ENST00000587220 PKD1L3Q7Z443 1732 aa14.6□□□□□ -0.07
ZNF540-205ENST00000587220 PTGER2P43116 358 aa14.59□□□□□ -0.07
ZNF540-205ENST00000587220 MPRIPQ6WCQ1 1025 aa14.59□□□□□ -0.07
ZNF540-205ENST00000587220 MORC1Q86VD1 984 aa14.59□□□□□ -0.07
ZNF540-205ENST00000587220 EYA1Q99502 592 aa14.59□□□□□ -0.07
ZNF540-205ENST00000587220 KNSTRNQ9Y448 316 aa14.59□□□□□ -0.07
ZNF540-205ENST00000587220 CYP27B1O15528 508 aa14.58□□□□□ -0.08
ZNF540-205ENST00000587220 AKT1S1Q96B36 256 aa14.58□□□□□ -0.08
ZNF540-205ENST00000587220 QSER1Q2KHR3 1735 aa14.58□□□□□ -0.08
ZNF540-205ENST00000587220 NCAPD2Q15021 1401 aa14.58□□□□□ -0.08
ZNF540-205ENST00000587220 HMGB2P26583 209 aaKnown RBP14.57□□□□□ -0.08
ZNF540-205ENST00000587220 EIF4A2Q14240 407 aaKnown RBP14.57□□□□□ -0.08
ZNF540-205ENST00000587220 MSH5O43196 834 aa14.56□□□□□ -0.08
ZNF540-205ENST00000587220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.56□□□□□ -0.08
ZNF540-205ENST00000587220 PALLDQ8WX93 1383 aa14.56□□□□□ -0.08
ZNF540-205ENST00000587220 TOGARAM1Q9Y4F4 1720 aa14.55□□□□□ -0.08
ZNF540-205ENST00000587220 ITGB4P16144 1822 aa14.55□□□□□ -0.08
ZNF540-205ENST00000587220 POLD1P28340 1107 aa14.55□□□□□ -0.08
ZNF540-205ENST00000587220 SLC16A10Q8TF71 515 aa14.55□□□□□ -0.08
ZNF540-205ENST00000587220 SMARCC1Q92922 1105 aaPredicted RBP14.55□□□□□ -0.08
ZNF540-205ENST00000587220 ARXQ96QS3 562 aa14.55□□□□□ -0.08
ZNF540-205ENST00000587220 FHDC1Q9C0D6 1143 aaPredicted RBP14.55□□□□□ -0.08
ZNF540-205ENST00000587220 PNPLA7Q6ZV29 1317 aa14.55□□□□□ -0.08
ZNF540-205ENST00000587220 C5P01031 1676 aa14.55□□□□□ -0.08
ZNF540-205ENST00000587220 TUBGCP6Q96RT7 1819 aa14.55□□□□□ -0.08
ZNF540-205ENST00000587220 IFNL2Q8IZJ0 200 aa14.54□□□□□ -0.08
ZNF540-205ENST00000587220 KIF7Q2M1P5 1343 aa14.54□□□□□ -0.08
ZNF540-205ENST00000587220 NKX1-1Q15270 411 aaPredicted RBP14.53□□□□□ -0.08
ZNF540-205ENST00000587220 KLHL34Q8N239 644 aa14.53□□□□□ -0.08
ZNF540-205ENST00000587220 SGIP1Q9BQI5 828 aa14.53□□□□□ -0.08
ZNF540-205ENST00000587220 TMOD3Q9NYL9 352 aa14.53□□□□□ -0.08
ZNF540-205ENST00000587220 IGSF1Q8N6C5 1336 aa14.52□□□□□ -0.08
ZNF540-205ENST00000587220 PHKG2P15735 406 aa14.52□□□□□ -0.09
ZNF540-205ENST00000587220 SYT17Q9BSW7 474 aa14.52□□□□□ -0.09
ZNF540-205ENST00000587220 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
ZNF540-205ENST00000587220 YY1P25490 414 aa14.51□□□□□ -0.09
ZNF540-205ENST00000587220 PIGBQ92521 554 aa14.51□□□□□ -0.09
ZNF540-205ENST00000587220 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
ZNF540-205ENST00000587220 AK7Q96M32 723 aa14.5□□□□□ -0.09
ZNF540-205ENST00000587220 TAF1LQ8IZX4 1826 aa14.5□□□□□ -0.09
ZNF540-205ENST00000587220 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
ZNF540-205ENST00000587220 FLAD1Q8NFF5 587 aa14.49□□□□□ -0.09
ZNF540-205ENST00000587220 C4BP0C0L5 1744 aa14.49□□□□□ -0.09
ZNF540-205ENST00000587220 AMOTQ4VCS5 1084 aa14.48□□□□□ -0.09
ZNF540-205ENST00000587220 AMER1Q5JTC6 1135 aaPredicted RBP14.48□□□□□ -0.09
ZNF540-205ENST00000587220 C1orf141Q5JVX7 400 aa14.48□□□□□ -0.09
ZNF540-205ENST00000587220 COL23A1Q86Y22 540 aaPredicted RBP14.48□□□□□ -0.09
ZNF540-205ENST00000587220 MAP3K5Q99683 1374 aa14.47□□□□□ -0.09
ZNF540-205ENST00000587220 LOC102724428A0A0B4J2F2 783 aa14.47□□□□□ -0.09
ZNF540-205ENST00000587220 SIK1P57059 783 aa14.47□□□□□ -0.09
ZNF540-205ENST00000587220 CC2D1BQ5T0F9 858 aaKnown RBP14.47□□□□□ -0.09
ZNF540-205ENST00000587220 SULT6B1Q6IMI4 303 aa14.47□□□□□ -0.09
ZNF540-205ENST00000587220 ZNF530Q6P9A1 599 aaPredicted RBP14.47□□□□□ -0.09
ZNF540-205ENST00000587220 DCAF5Q96JK2 942 aa14.47□□□□□ -0.09
ZNF540-205ENST00000587220 ASAP1Q9ULH1 1129 aa14.47□□□□□ -0.09
ZNF540-205ENST00000587220 COL24A1Q17RW2 1714 aa14.46□□□□□ -0.09
ZNF540-205ENST00000587220 PHF14O94880 888 aa14.46□□□□□ -0.09
ZNF540-205ENST00000587220 CNGB1Q14028 1251 aaPredicted RBP14.46□□□□□ -0.09
ZNF540-205ENST00000587220 MSL1Q68DK7 614 aa14.46□□□□□ -0.09
ZNF540-205ENST00000587220 AEBP1Q8IUX7 1158 aa14.46□□□□□ -0.09
ZNF540-205ENST00000587220 UTRNP46939 3433 aa14.46□□□□□ -0.09
ZNF540-205ENST00000587220 ERVV-2B6SEH9 535 aa14.45□□□□□ -0.1
ZNF540-205ENST00000587220 ATP6V1AP38606 617 aa14.45□□□□□ -0.1
ZNF540-205ENST00000587220 MTHFSP49914 203 aa14.45□□□□□ -0.1
ZNF540-205ENST00000587220 IL13P35225 146 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms