RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 QSER1Q2KHR3 1735 aa23.03■■□□□ 1.28
NPC1-205ENST00000587163 TFCP2L1Q9NZI6 479 aa23.03■■□□□ 1.28
NPC1-205ENST00000587163 DOT1LQ8TEK3 1739 aa23.02■■□□□ 1.28
NPC1-205ENST00000587163 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
NPC1-205ENST00000587163 ZCRB1Q8TBF4 217 aaKnown RBP23.02■■□□□ 1.28
NPC1-205ENST00000587163 MEGF6O75095 1541 aa23.02■■□□□ 1.28
NPC1-205ENST00000587163 TUBGCP6Q96RT7 1819 aa23.01■■□□□ 1.27
NPC1-205ENST00000587163 GPR162Q16538 588 aa23.01■■□□□ 1.27
NPC1-205ENST00000587163 COL24A1Q17RW2 1714 aa23.01■■□□□ 1.27
NPC1-205ENST00000587163 KLHL34Q8N239 644 aa23■■□□□ 1.27
NPC1-205ENST00000587163 LY75O60449 1722 aa22.99■■□□□ 1.27
NPC1-205ENST00000587163 POLD1P28340 1107 aa22.99■■□□□ 1.27
NPC1-205ENST00000587163 RRS1Q15050 365 aaKnown RBP22.99■■□□□ 1.27
NPC1-205ENST00000587163 NBPF6Q5VWK0 638 aa22.99■■□□□ 1.27
NPC1-205ENST00000587163 NBPF4Q96M43 638 aa22.99■■□□□ 1.27
NPC1-205ENST00000587163 USHBP1Q8N6Y0 703 aa22.98■■□□□ 1.27
NPC1-205ENST00000587163 FYB1O15117 783 aa22.97■■□□□ 1.27
NPC1-205ENST00000587163 GGNBP2Q9H3C7 697 aa22.97■■□□□ 1.27
NPC1-205ENST00000587163 NLGN2Q8NFZ4 835 aa22.96■■□□□ 1.27
NPC1-205ENST00000587163 CCNL1Q9UK58 526 aaPredicted RBP22.96■■□□□ 1.27
NPC1-205ENST00000587163 RTL1A6NKG5 1358 aa22.94■■□□□ 1.26
NPC1-205ENST00000587163 SLC24A1O60721 1099 aa22.93■■□□□ 1.26
NPC1-205ENST00000587163 COL23A1Q86Y22 540 aaPredicted RBP22.93■■□□□ 1.26
NPC1-205ENST00000587163 PELP1Q8IZL8 1130 aaKnown RBP22.93■■□□□ 1.26
NPC1-205ENST00000587163 C1QTNF8P60827 252 aa22.92■■□□□ 1.26
NPC1-205ENST00000587163 USP47Q96K76 1375 aa22.91■■□□□ 1.26
NPC1-205ENST00000587163 GOLGB1Q14789 3259 aaKnown RBP22.91■■□□□ 1.26
NPC1-205ENST00000587163 HSP90AB2PQ58FF8 381 aa22.91■■□□□ 1.26
NPC1-205ENST00000587163 CGNL1Q0VF96 1302 aa22.9■■□□□ 1.26
NPC1-205ENST00000587163 MSH5O43196 834 aa22.9■■□□□ 1.26
NPC1-205ENST00000587163 RAPGEF4Q8WZA2 1011 aa22.9■■□□□ 1.26
NPC1-205ENST00000587163 TATP17735 454 aaPredicted RBP22.88■■□□□ 1.25
NPC1-205ENST00000587163 TMF1P82094 1093 aa22.88■■□□□ 1.25
NPC1-205ENST00000587163 SENP3-EIF4A1A0A087X0R7 540 aa22.87■■□□□ 1.25
NPC1-205ENST00000587163 YBX3P16989 372 aaKnown RBP eCLIP22.87■■□□□ 1.25
NPC1-205ENST00000587163 MSL1Q68DK7 614 aa22.87■■□□□ 1.25
NPC1-205ENST00000587163 INSRP06213 1382 aa22.87■■□□□ 1.25
NPC1-205ENST00000587163 SMG6Q86US8 1419 aaKnown RBP22.86■■□□□ 1.25
NPC1-205ENST00000587163 CYP27B1O15528 508 aa22.85■■□□□ 1.25
NPC1-205ENST00000587163 MPRIPQ6WCQ1 1025 aa22.84■■□□□ 1.25
NPC1-205ENST00000587163 C5P01031 1676 aa22.84■■□□□ 1.25
NPC1-205ENST00000587163 PCDH11XQ9BZA7 1347 aa22.83■■□□□ 1.25
NPC1-205ENST00000587163 PCDH11YQ9BZA8 1340 aa22.83■■□□□ 1.25
NPC1-205ENST00000587163 CARD14Q9BXL6 1004 aa22.83■■□□□ 1.25
NPC1-205ENST00000587163 FLT4P35916 1363 aa22.83■■□□□ 1.25
NPC1-205ENST00000587163 KIF20BQ96Q89 1820 aa22.82■■□□□ 1.24
NPC1-205ENST00000587163 PALLDQ8WX93 1383 aa22.82■■□□□ 1.24
NPC1-205ENST00000587163 EMILIN1Q9Y6C2 1016 aa22.81■■□□□ 1.24
NPC1-205ENST00000587163 TAF1LQ8IZX4 1826 aa22.8■■□□□ 1.24
NPC1-205ENST00000587163 GIGYF1O75420 1035 aaPredicted RBP22.8■■□□□ 1.24
NPC1-205ENST00000587163 TOGARAM1Q9Y4F4 1720 aa22.79■■□□□ 1.24
NPC1-205ENST00000587163 KIF24Q5T7B8 1368 aa22.79■■□□□ 1.24
NPC1-205ENST00000587163 GRIN3BO60391 1043 aa22.79■■□□□ 1.24
NPC1-205ENST00000587163 AMIGO3Q86WK7 504 aa22.79■■□□□ 1.24
NPC1-205ENST00000587163 SMIM5Q71RC9 77 aa22.78■■□□□ 1.24
NPC1-205ENST00000587163 ITGB4P16144 1822 aa22.78■■□□□ 1.24
NPC1-205ENST00000587163 FLAD1Q8NFF5 587 aa22.77■■□□□ 1.24
NPC1-205ENST00000587163 PIGBQ92521 554 aa22.77■■□□□ 1.24
NPC1-205ENST00000587163 CDCA8Q53HL2 280 aa22.76■■□□□ 1.23
NPC1-205ENST00000587163 CD2APQ9Y5K6 639 aa22.76■■□□□ 1.23
NPC1-205ENST00000587163 NSD3Q9BZ95 1437 aa22.75■■□□□ 1.23
NPC1-205ENST00000587163 C4BP0C0L5 1744 aa22.75■■□□□ 1.23
NPC1-205ENST00000587163 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
NPC1-205ENST00000587163 NCAPD2Q15021 1401 aa22.74■■□□□ 1.23
NPC1-205ENST00000587163 PKD1L3Q7Z443 1732 aa22.74■■□□□ 1.23
NPC1-205ENST00000587163 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
NPC1-205ENST00000587163 NKX1-1Q15270 411 aaPredicted RBP22.74■■□□□ 1.23
NPC1-205ENST00000587163 HMGB2P26583 209 aaKnown RBP22.73■■□□□ 1.23
NPC1-205ENST00000587163 AK7Q96M32 723 aa22.73■■□□□ 1.23
NPC1-205ENST00000587163 PHF14O94880 888 aa22.72■■□□□ 1.23
NPC1-205ENST00000587163 EYA1Q99502 592 aa22.71■■□□□ 1.23
NPC1-205ENST00000587163 UBR3Q6ZT12 1888 aa22.71■■□□□ 1.23
NPC1-205ENST00000587163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.7■■□□□ 1.22
NPC1-205ENST00000587163 LINC00116Q8NCU8 138 aa22.7■■□□□ 1.22
NPC1-205ENST00000587163 SPG7Q9UQ90 795 aa22.7■■□□□ 1.22
NPC1-205ENST00000587163 WASHC2AQ641Q2 1341 aa22.7■■□□□ 1.22
NPC1-205ENST00000587163 MAP2P11137 1827 aaKnown RBP22.7■■□□□ 1.22
NPC1-205ENST00000587163 ATP10DQ9P241 1426 aa22.69■■□□□ 1.22
NPC1-205ENST00000587163 LOC102724428A0A0B4J2F2 783 aa22.68■■□□□ 1.22
NPC1-205ENST00000587163 SIK1P57059 783 aa22.68■■□□□ 1.22
NPC1-205ENST00000587163 ASAP1Q9ULH1 1129 aa22.68■■□□□ 1.22
NPC1-205ENST00000587163 ANKRD26Q9UPS8 1709 aa22.68■■□□□ 1.22
NPC1-205ENST00000587163 POLKQ9UBT6 870 aa22.67■■□□□ 1.22
NPC1-205ENST00000587163 WWC3Q9ULE0 1092 aa22.67■■□□□ 1.22
NPC1-205ENST00000587163 ITPK1Q13572 414 aa22.66■■□□□ 1.22
NPC1-205ENST00000587163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.66■■□□□ 1.22
NPC1-205ENST00000587163 SSFA2P28290 1259 aa22.65■■□□□ 1.22
NPC1-205ENST00000587163 TMOD3Q9NYL9 352 aa22.65■■□□□ 1.22
NPC1-205ENST00000587163 IGSF1Q8N6C5 1336 aa22.64■■□□□ 1.22
NPC1-205ENST00000587163 PHKG2P15735 406 aa22.64■■□□□ 1.21
NPC1-205ENST00000587163 IFNL2Q8IZJ0 200 aa22.63■■□□□ 1.21
NPC1-205ENST00000587163 ATG3Q9NT62 314 aa22.63■■□□□ 1.21
NPC1-205ENST00000587163 CEP350Q5VT06 3117 aa22.63■■□□□ 1.21
NPC1-205ENST00000587163 ADCY9O60503 1353 aa22.63■■□□□ 1.21
NPC1-205ENST00000587163 GNPATO15228 680 aa22.62■■□□□ 1.21
NPC1-205ENST00000587163 ATP6V1AP38606 617 aa22.62■■□□□ 1.21
NPC1-205ENST00000587163 EIF4A2Q14240 407 aaKnown RBP22.61■■□□□ 1.21
NPC1-205ENST00000587163 ZNF526Q8TF50 670 aaPredicted RBP22.61■■□□□ 1.21
NPC1-205ENST00000587163 GPBP1L1Q9HC44 474 aaPredicted RBP22.61■■□□□ 1.21
NPC1-205ENST00000587163 TNNT2P45379 298 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms