RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 COL3A1P02461 1466 aaPredicted RBP28.83■■■□□ 2.21
RETREG3-204ENST00000586796 HMOX1P09601 288 aa28.82■■■□□ 2.2
RETREG3-204ENST00000586796 TRIM37O94972 964 aa28.8■■■□□ 2.2
RETREG3-204ENST00000586796 PRKRIP1Q9H875 184 aaPredicted RBP28.8■■■□□ 2.2
RETREG3-204ENST00000586796 MYBBP1AQ9BQG0 1328 aaKnown RBP28.79■■■□□ 2.2
RETREG3-204ENST00000586796 SF3B2Q13435 895 aaKnown RBP28.78■■■□□ 2.2
RETREG3-204ENST00000586796 RGPD1P0DJD0 1748 aa28.77■■■□□ 2.2
RETREG3-204ENST00000586796 SPG7Q9UQ90 795 aa28.77■■■□□ 2.2
RETREG3-204ENST00000586796 NUDCQ9Y266 331 aa28.77■■■□□ 2.2
RETREG3-204ENST00000586796 CCDC125Q86Z20 511 aa28.75■■■□□ 2.19
RETREG3-204ENST00000586796 ACSBG1Q96GR2 724 aa28.75■■■□□ 2.19
RETREG3-204ENST00000586796 PCDH11XQ9BZA7 1347 aa28.74■■■□□ 2.19
RETREG3-204ENST00000586796 PCDH11YQ9BZA8 1340 aa28.74■■■□□ 2.19
RETREG3-204ENST00000586796 EP400Q96L91 3159 aa28.74■■■□□ 2.19
RETREG3-204ENST00000586796 KDRP35968 1356 aa28.73■■■□□ 2.19
RETREG3-204ENST00000586796 U2AF1L5P0DN76 240 aaPredicted RBP28.72■■■□□ 2.19
RETREG3-204ENST00000586796 U2AF1Q01081 240 aaKnown RBP eCLIP28.72■■■□□ 2.19
RETREG3-204ENST00000586796 PLEKHO1Q53GL0 409 aaPredicted RBP28.72■■■□□ 2.19
RETREG3-204ENST00000586796 SHANK3Q9BYB0 1731 aa28.72■■■□□ 2.19
RETREG3-204ENST00000586796 CYP27B1O15528 508 aa28.71■■■□□ 2.19
RETREG3-204ENST00000586796 ANP32CO43423 234 aa28.71■■■□□ 2.19
RETREG3-204ENST00000586796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.7■■■□□ 2.18
RETREG3-204ENST00000586796 PTF1AQ7RTS3 328 aa28.69■■■□□ 2.18
RETREG3-204ENST00000586796 DEFB132Q7Z7B7 95 aa28.69■■■□□ 2.18
RETREG3-204ENST00000586796 KCNQ2O43526 872 aa28.68■■■□□ 2.18
RETREG3-204ENST00000586796 APBA3O96018 575 aa28.68■■■□□ 2.18
RETREG3-204ENST00000586796 AMOTQ4VCS5 1084 aa28.68■■■□□ 2.18
RETREG3-204ENST00000586796 PKD1L3Q7Z443 1732 aa28.68■■■□□ 2.18
RETREG3-204ENST00000586796 BCL9O00512 1426 aa28.68■■■□□ 2.18
RETREG3-204ENST00000586796 ZNF530Q6P9A1 599 aaPredicted RBP28.66■■■□□ 2.18
RETREG3-204ENST00000586796 IFNL2Q8IZJ0 200 aa28.66■■■□□ 2.18
RETREG3-204ENST00000586796 SYTL4Q96C24 671 aaPredicted RBP28.66■■■□□ 2.18
RETREG3-204ENST00000586796 PHKG2P15735 406 aa28.65■■■□□ 2.18
RETREG3-204ENST00000586796 BAG6P46379 1132 aa28.65■■■□□ 2.18
RETREG3-204ENST00000586796 BCL11BQ9C0K0 894 aaPredicted RBP28.65■■■□□ 2.18
RETREG3-204ENST00000586796 PRKAR2BP31323 418 aa28.63■■■□□ 2.17
RETREG3-204ENST00000586796 RSPH6AQ9H0K4 717 aa28.63■■■□□ 2.17
RETREG3-204ENST00000586796 PLEKHG2Q9H7P9 1386 aa28.62■■■□□ 2.17
RETREG3-204ENST00000586796 SBF2Q86WG5 1849 aa28.62■■■□□ 2.17
RETREG3-204ENST00000586796 PRIM1P49642 420 aaKnown RBP28.62■■■□□ 2.17
RETREG3-204ENST00000586796 EN1Q05925 392 aaPredicted RBP28.62■■■□□ 2.17
RETREG3-204ENST00000586796 C1orf141Q5JVX7 400 aa28.62■■■□□ 2.17
RETREG3-204ENST00000586796 TNS1Q9HBL0 1735 aaKnown RBP28.61■■■□□ 2.17
RETREG3-204ENST00000586796 MTHFSDQ2M296 383 aaKnown RBP28.6■■■□□ 2.17
RETREG3-204ENST00000586796 FCHSD2O94868 740 aa28.59■■■□□ 2.17
RETREG3-204ENST00000586796 NKX1-1Q15270 411 aaPredicted RBP28.59■■■□□ 2.17
RETREG3-204ENST00000586796 DOT1LQ8TEK3 1739 aa28.57■■■□□ 2.16
RETREG3-204ENST00000586796 PHACTR3Q96KR7 559 aa28.57■■■□□ 2.16
RETREG3-204ENST00000586796 NHSQ6T4R5 1651 aa28.57■■■□□ 2.16
RETREG3-204ENST00000586796 EZH2Q15910 746 aaKnown RBP28.56■■■□□ 2.16
RETREG3-204ENST00000586796 KAT6BQ8WYB5 2073 aa28.55■■■□□ 2.16
RETREG3-204ENST00000586796 HSP90AB1P08238 724 aaKnown RBP28.55■■■□□ 2.16
RETREG3-204ENST00000586796 WDR43Q15061 677 aaKnown RBP eCLIP28.55■■■□□ 2.16
RETREG3-204ENST00000586796 MPRIPQ6WCQ1 1025 aa28.55■■■□□ 2.16
RETREG3-204ENST00000586796 CCDC184Q52MB2 194 aa28.54■■■□□ 2.16
RETREG3-204ENST00000586796 AKAP4Q5JQC9 854 aa28.54■■■□□ 2.16
RETREG3-204ENST00000586796 DCAF5Q96JK2 942 aa28.53■■■□□ 2.16
RETREG3-204ENST00000586796 CAMKK2Q96RR4 588 aa28.53■■■□□ 2.16
RETREG3-204ENST00000586796 GAS2L2Q8NHY3 880 aa28.52■■■□□ 2.16
RETREG3-204ENST00000586796 NEFMP07197 916 aa28.51■■■□□ 2.15
RETREG3-204ENST00000586796 TOGARAM1Q9Y4F4 1720 aa28.5■■■□□ 2.15
RETREG3-204ENST00000586796 PLSCR1O15162 318 aa28.49■■■□□ 2.15
RETREG3-204ENST00000586796 PNNQ9H307 717 aaKnown RBP28.49■■■□□ 2.15
RETREG3-204ENST00000586796 TMOD3Q9NYL9 352 aa28.49■■■□□ 2.15
RETREG3-204ENST00000586796 KDM6AO15550 1401 aaPredicted RBP28.49■■■□□ 2.15
RETREG3-204ENST00000586796 BTAF1O14981 1849 aa28.48■■■□□ 2.15
RETREG3-204ENST00000586796 MRS2Q9HD23 443 aa28.48■■■□□ 2.15
RETREG3-204ENST00000586796 PIGBQ92521 554 aa28.47■■■□□ 2.15
RETREG3-204ENST00000586796 PLEKHF1Q96S99 279 aa28.47■■■□□ 2.15
RETREG3-204ENST00000586796 LGR6Q9HBX8 967 aa28.47■■■□□ 2.15
RETREG3-204ENST00000586796 ADAMTS8Q9UP79 889 aa28.47■■■□□ 2.15
RETREG3-204ENST00000586796 CABP4P57796 275 aa28.46■■■□□ 2.15
RETREG3-204ENST00000586796 CCDC146Q8IYE0 955 aa28.46■■■□□ 2.15
RETREG3-204ENST00000586796 MAPK8IP3Q9UPT6 1336 aa28.45■■■□□ 2.15
RETREG3-204ENST00000586796 GNAT3A8MTJ3 354 aa28.45■■■□□ 2.14
RETREG3-204ENST00000586796 ERVV-2B6SEH9 535 aa28.45■■■□□ 2.14
RETREG3-204ENST00000586796 RNMTO43148 476 aaKnown RBP28.44■■■□□ 2.14
RETREG3-204ENST00000586796 MAP3K5Q99683 1374 aa28.44■■■□□ 2.14
RETREG3-204ENST00000586796 TXNRD1Q16881 649 aa28.43■■■□□ 2.14
RETREG3-204ENST00000586796 ITGB4P16144 1822 aa28.42■■■□□ 2.14
RETREG3-204ENST00000586796 PROM2Q8N271 834 aa28.42■■■□□ 2.14
RETREG3-204ENST00000586796 DIEXFQ68CQ4 756 aaKnown RBP28.41■■■□□ 2.14
RETREG3-204ENST00000586796 NFATC2IPQ8NCF5 419 aa28.41■■■□□ 2.14
RETREG3-204ENST00000586796 ASAP1Q9ULH1 1129 aa28.39■■■□□ 2.14
RETREG3-204ENST00000586796 KCNQ4P56696 695 aa28.38■■■□□ 2.13
RETREG3-204ENST00000586796 IL17REQ8NFR9 667 aa28.38■■■□□ 2.13
RETREG3-204ENST00000586796 RTF1Q92541 710 aaKnown RBP28.38■■■□□ 2.13
RETREG3-204ENST00000586796 SLC52A2Q9HAB3 445 aa28.38■■■□□ 2.13
RETREG3-204ENST00000586796 NFE2L2Q16236 605 aa28.37■■■□□ 2.13
RETREG3-204ENST00000586796 SMARCC1Q92922 1105 aaPredicted RBP28.37■■■□□ 2.13
RETREG3-204ENST00000586796 RUNDC1Q96C34 613 aa28.37■■■□□ 2.13
RETREG3-204ENST00000586796 SCN11AQ9UI33 1791 aa28.37■■■□□ 2.13
RETREG3-204ENST00000586796 PALLDQ8WX93 1383 aa28.37■■■□□ 2.13
RETREG3-204ENST00000586796 DCTN1Q14203 1278 aa28.36■■■□□ 2.13
RETREG3-204ENST00000586796 MCM10Q7L590 875 aa28.36■■■□□ 2.13
RETREG3-204ENST00000586796 ATG3Q9NT62 314 aa28.36■■■□□ 2.13
RETREG3-204ENST00000586796 RGPD3A6NKT7 1758 aaPredicted RBP28.36■■■□□ 2.13
RETREG3-204ENST00000586796 RGPD4Q7Z3J3 1758 aa28.36■■■□□ 2.13
RETREG3-204ENST00000586796 PNISRQ8TF01 805 aaKnown RBP28.35■■■□□ 2.13
RETREG3-204ENST00000586796 RREB1Q92766 1687 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms