RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.1□□□□□ -0.63
NPC1-204ENST00000586718 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
NPC1-204ENST00000586718 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
NPC1-204ENST00000586718 TRIM35Q9UPQ4 493 aa11.1□□□□□ -0.63
NPC1-204ENST00000586718 NUTM2BA6NNL0 878 aaPredicted RBP11.09□□□□□ -0.63
NPC1-204ENST00000586718 GNAT3A8MTJ3 354 aa11.09□□□□□ -0.63
NPC1-204ENST00000586718 NUTM2EB1AL46 878 aaPredicted RBP11.09□□□□□ -0.63
NPC1-204ENST00000586718 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
NPC1-204ENST00000586718 ADAMTS2O95450 1211 aa11.09□□□□□ -0.63
NPC1-204ENST00000586718 GNAI1P63096 354 aa11.09□□□□□ -0.63
NPC1-204ENST00000586718 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
NPC1-204ENST00000586718 C1orf141Q5JVX7 400 aa11.09□□□□□ -0.63
NPC1-204ENST00000586718 ZNF530Q6P9A1 599 aaPredicted RBP11.09□□□□□ -0.63
NPC1-204ENST00000586718 NUTM2AQ8IVF1 878 aaPredicted RBP11.09□□□□□ -0.63
NPC1-204ENST00000586718 BTG4Q9NY30 223 aa11.09□□□□□ -0.63
NPC1-204ENST00000586718 DUSP27Q5VZP5 1158 aa11.08□□□□□ -0.64
NPC1-204ENST00000586718 CARD10Q9BWT7 1032 aa11.08□□□□□ -0.64
NPC1-204ENST00000586718 IFT57Q9NWB7 429 aa11.08□□□□□ -0.64
NPC1-204ENST00000586718 SPG7Q9UQ90 795 aa11.08□□□□□ -0.64
NPC1-204ENST00000586718 FANCIQ9NVI1 1328 aa11.08□□□□□ -0.64
NPC1-204ENST00000586718 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
NPC1-204ENST00000586718 FAM83GA6ND36 823 aa11.07□□□□□ -0.64
NPC1-204ENST00000586718 AKAP4Q5JQC9 854 aa11.07□□□□□ -0.64
NPC1-204ENST00000586718 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
NPC1-204ENST00000586718 SLIT2O94813 1529 aa11.07□□□□□ -0.64
NPC1-204ENST00000586718 SCN11AQ9UI33 1791 aa11.07□□□□□ -0.64
NPC1-204ENST00000586718 SHANK3Q9BYB0 1731 aa11.06□□□□□ -0.64
NPC1-204ENST00000586718 LRP6O75581 1613 aa11.06□□□□□ -0.64
NPC1-204ENST00000586718 TRMT2AQ8IZ69 625 aaKnown RBP11.06□□□□□ -0.64
NPC1-204ENST00000586718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■□□□□ 8.4
NPC1-204ENST00000586718 LAS1LQ9Y4W2 734 aaKnown RBP11.06□□□□□ -0.64
NPC1-204ENST00000586718 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
NPC1-204ENST00000586718 CT47B1P0C2W7 299 aaPredicted RBP11.05□□□□□ -0.64
NPC1-204ENST00000586718 IL2RBP14784 551 aa11.05□□□□□ -0.64
NPC1-204ENST00000586718 HSPA1LP34931 641 aa11.05□□□□□ -0.64
NPC1-204ENST00000586718 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
NPC1-204ENST00000586718 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
NPC1-204ENST00000586718 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
NPC1-204ENST00000586718 PCDH11XQ9BZA7 1347 aa11.05□□□□□ -0.64
NPC1-204ENST00000586718 PCDH11YQ9BZA8 1340 aa11.05□□□□□ -0.64
NPC1-204ENST00000586718 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
NPC1-204ENST00000586718 MCM10Q7L590 875 aa11.04□□□□□ -0.64
NPC1-204ENST00000586718 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
NPC1-204ENST00000586718 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
NPC1-204ENST00000586718 THUMPD2Q9BTF0 503 aaKnown RBP11.04□□□□□ -0.64
NPC1-204ENST00000586718 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
NPC1-204ENST00000586718 SUPT16HQ9Y5B9 1047 aaKnown RBP11.04□□□□□ -0.64
NPC1-204ENST00000586718 DISP2A7MBM2 1401 aa11.03□□□□□ -0.64
NPC1-204ENST00000586718 TNS2Q63HR2 1409 aa11.03□□□□□ -0.64
NPC1-204ENST00000586718 TEFQ10587 303 aa11.03□□□□□ -0.64
NPC1-204ENST00000586718 DCTN1Q14203 1278 aa11.03□□□□□ -0.64
NPC1-204ENST00000586718 IFNL2Q8IZJ0 200 aa11.03□□□□□ -0.64
NPC1-204ENST00000586718 TSR2Q969E8 191 aaKnown RBP11.03□□□□□ -0.64
NPC1-204ENST00000586718 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
NPC1-204ENST00000586718 MRC1P22897 1456 aa11.03□□□□□ -0.64
NPC1-204ENST00000586718 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
NPC1-204ENST00000586718 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
NPC1-204ENST00000586718 CDCA7Q9BWT1 371 aaPredicted RBP11.02□□□□□ -0.65
NPC1-204ENST00000586718 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.65
NPC1-204ENST00000586718 TSPYL4Q9UJ04 414 aa11.02□□□□□ -0.65
NPC1-204ENST00000586718 CCDC9Q9Y3X0 531 aaKnown RBP11.02□□□□□ -0.65
NPC1-204ENST00000586718 ZNF853P0CG23 659 aa11.01□□□□□ -0.65
NPC1-204ENST00000586718 PHKG2P15735 406 aa11.01□□□□□ -0.65
NPC1-204ENST00000586718 CANXP27824 592 aaKnown RBP11.01□□□□□ -0.65
NPC1-204ENST00000586718 RRP1P56182 461 aaKnown RBP11.01□□□□□ -0.65
NPC1-204ENST00000586718 EXOSC9Q06265 439 aaKnown RBP11.01□□□□□ -0.65
NPC1-204ENST00000586718 ZCRB1Q8TBF4 217 aaKnown RBP11.01□□□□□ -0.65
NPC1-204ENST00000586718 MBIPQ9NS73 344 aa11.01□□□□□ -0.65
NPC1-204ENST00000586718 USP35Q9P2H5 1018 aa11.01□□□□□ -0.65
NPC1-204ENST00000586718 THRAP3Q9Y2W1 955 aaKnown RBP11.01□□□□□ -0.65
NPC1-204ENST00000586718 GTF3C3Q9Y5Q9 886 aa11.01□□□□□ -0.65
NPC1-204ENST00000586718 KDM6AO15550 1401 aaPredicted RBP11.01□□□□□ -0.65
NPC1-204ENST00000586718 UNC5CLQ8IV45 518 aa11□□□□□ -0.65
NPC1-204ENST00000586718 ZNF428Q96B54 188 aa11□□□□□ -0.65
NPC1-204ENST00000586718 SPATA31A1Q5TZJ5 1347 aa11□□□□□ -0.65
NPC1-204ENST00000586718 DOT1LQ8TEK3 1739 aa10.99□□□□□ -0.65
NPC1-204ENST00000586718 TOGARAM1Q9Y4F4 1720 aa10.99□□□□□ -0.65
NPC1-204ENST00000586718 RNMTO43148 476 aaKnown RBP10.99□□□□□ -0.65
NPC1-204ENST00000586718 TAF7Q15545 349 aaPredicted RBP10.99□□□□□ -0.65
NPC1-204ENST00000586718 MPRIPQ6WCQ1 1025 aa10.99□□□□□ -0.65
NPC1-204ENST00000586718 DCAF5Q96JK2 942 aa10.99□□□□□ -0.65
NPC1-204ENST00000586718 SPATA31A5Q5VU36 1347 aa10.99□□□□□ -0.65
NPC1-204ENST00000586718 RNF123Q5XPI4 1314 aa10.99□□□□□ -0.65
NPC1-204ENST00000586718 SPATA31A7Q8IWB4 1347 aa10.99□□□□□ -0.65
NPC1-204ENST00000586718 PAPPAQ13219 1627 aa10.98□□□□□ -0.65
NPC1-204ENST00000586718 CHL1O00533 1208 aa10.98□□□□□ -0.65
NPC1-204ENST00000586718 VPS72Q15906 364 aa10.98□□□□□ -0.65
NPC1-204ENST00000586718 IL17REQ8NFR9 667 aa10.98□□□□□ -0.65
NPC1-204ENST00000586718 SOS1Q07889 1333 aaPredicted RBP10.98□□□□□ -0.65
NPC1-204ENST00000586718 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
NPC1-204ENST00000586718 BCL9LQ86UU0 1499 aa10.98□□□□□ -0.65
NPC1-204ENST00000586718 LAMB4A4D0S4 1761 aa10.98□□□□□ -0.65
NPC1-204ENST00000586718 CYP27B1O15528 508 aa10.97□□□□□ -0.65
NPC1-204ENST00000586718 FKBP8Q14318 412 aa10.97□□□□□ -0.65
NPC1-204ENST00000586718 TWISTNBQ3B726 338 aaPredicted RBP10.97□□□□□ -0.65
NPC1-204ENST00000586718 FNBP4Q8N3X1 1017 aaPredicted RBP10.97□□□□□ -0.65
NPC1-204ENST00000586718 CHMP4AQ9BY43 222 aa10.97□□□□□ -0.65
NPC1-204ENST00000586718 SMC4Q9NTJ3 1288 aa10.97□□□□□ -0.65
NPC1-204ENST00000586718 USP21Q9UK80 565 aa10.97□□□□□ -0.65
NPC1-204ENST00000586718 THSD7AQ9UPZ6 1657 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms