RNA–Protein interactions for RNA: ENST00000586568.1

CXXC1-206, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-206ENST00000586568 LTN1O94822 1766 aa20.54■□□□□ 0.88
CXXC1-206ENST00000586568 UTRNP46939 3433 aa20.53■□□□□ 0.88
CXXC1-206ENST00000586568 HSP90AB2PQ58FF8 381 aa20.53■□□□□ 0.88
CXXC1-206ENST00000586568 USHBP1Q8N6Y0 703 aa20.53■□□□□ 0.88
CXXC1-206ENST00000586568 TFCP2L1Q9NZI6 479 aa20.53■□□□□ 0.88
CXXC1-206ENST00000586568 MAP3K5Q99683 1374 aa20.53■□□□□ 0.88
CXXC1-206ENST00000586568 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
CXXC1-206ENST00000586568 NSD2O96028 1365 aa20.52■□□□□ 0.88
CXXC1-206ENST00000586568 RAPGEF4Q8WZA2 1011 aa20.52■□□□□ 0.88
CXXC1-206ENST00000586568 CARD14Q9BXL6 1004 aa20.52■□□□□ 0.88
CXXC1-206ENST00000586568 PAPPAQ13219 1627 aa20.52■□□□□ 0.88
CXXC1-206ENST00000586568 MEGF6O75095 1541 aa20.52■□□□□ 0.87
CXXC1-206ENST00000586568 INSRP06213 1382 aa20.5■□□□□ 0.87
CXXC1-206ENST00000586568 MYOM1P52179 1685 aa20.5■□□□□ 0.87
CXXC1-206ENST00000586568 TATP17735 454 aaPredicted RBP20.49■□□□□ 0.87
CXXC1-206ENST00000586568 ZNF784Q8NCA9 323 aaPredicted RBP20.49■□□□□ 0.87
CXXC1-206ENST00000586568 CCNL1Q9UK58 526 aaPredicted RBP20.49■□□□□ 0.87
CXXC1-206ENST00000586568 POLD1P28340 1107 aa20.48■□□□□ 0.87
CXXC1-206ENST00000586568 BTAF1O14981 1849 aa20.48■□□□□ 0.87
CXXC1-206ENST00000586568 KIF24Q5T7B8 1368 aa20.47■□□□□ 0.87
CXXC1-206ENST00000586568 TIMELESSQ9UNS1 1208 aa20.47■□□□□ 0.87
CXXC1-206ENST00000586568 FLT4P35916 1363 aa20.46■□□□□ 0.87
CXXC1-206ENST00000586568 SMG6Q86US8 1419 aaKnown RBP20.46■□□□□ 0.87
CXXC1-206ENST00000586568 CYP27B1O15528 508 aa20.45■□□□□ 0.86
CXXC1-206ENST00000586568 FAM208AQ9UK61 1670 aaKnown RBP20.45■□□□□ 0.86
CXXC1-206ENST00000586568 COL23A1Q86Y22 540 aaPredicted RBP20.44■□□□□ 0.86
CXXC1-206ENST00000586568 EMILIN1Q9Y6C2 1016 aa20.44■□□□□ 0.86
CXXC1-206ENST00000586568 PCDH11XQ9BZA7 1347 aa20.44■□□□□ 0.86
CXXC1-206ENST00000586568 PCDH11YQ9BZA8 1340 aa20.44■□□□□ 0.86
CXXC1-206ENST00000586568 GPR162Q16538 588 aa20.43■□□□□ 0.86
CXXC1-206ENST00000586568 HMGB2P26583 209 aaKnown RBP20.42■□□□□ 0.86
CXXC1-206ENST00000586568 MSH5O43196 834 aa20.4■□□□□ 0.86
CXXC1-206ENST00000586568 MPRIPQ6WCQ1 1025 aa20.4■□□□□ 0.86
CXXC1-206ENST00000586568 KLHL34Q8N239 644 aa20.4■□□□□ 0.86
CXXC1-206ENST00000586568 NSD3Q9BZ95 1437 aa20.39■□□□□ 0.85
CXXC1-206ENST00000586568 WASHC2AQ641Q2 1341 aa20.39■□□□□ 0.85
CXXC1-206ENST00000586568 PPM1GO15355 546 aaPredicted RBP20.39■□□□□ 0.85
CXXC1-206ENST00000586568 NKX1-1Q15270 411 aaPredicted RBP20.39■□□□□ 0.85
CXXC1-206ENST00000586568 NLGN2Q8NFZ4 835 aa20.39■□□□□ 0.85
CXXC1-206ENST00000586568 KAT6BQ8WYB5 2073 aa20.38■□□□□ 0.85
CXXC1-206ENST00000586568 FLAD1Q8NFF5 587 aa20.37■□□□□ 0.85
CXXC1-206ENST00000586568 PIGBQ92521 554 aa20.37■□□□□ 0.85
CXXC1-206ENST00000586568 SMARCC1Q92922 1105 aaPredicted RBP20.37■□□□□ 0.85
CXXC1-206ENST00000586568 PALLDQ8WX93 1383 aa20.36■□□□□ 0.85
CXXC1-206ENST00000586568 GOLGB1Q14789 3259 aaKnown RBP20.36■□□□□ 0.85
CXXC1-206ENST00000586568 EYA1Q99502 592 aa20.36■□□□□ 0.85
CXXC1-206ENST00000586568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.36■□□□□ 0.85
CXXC1-206ENST00000586568 POLKQ9UBT6 870 aa20.36■□□□□ 0.85
CXXC1-206ENST00000586568 SPG7Q9UQ90 795 aa20.36■□□□□ 0.85
CXXC1-206ENST00000586568 CLSPNQ9HAW4 1339 aa20.34■□□□□ 0.85
CXXC1-206ENST00000586568 MSL1Q68DK7 614 aa20.34■□□□□ 0.85
CXXC1-206ENST00000586568 PELP1Q8IZL8 1130 aaKnown RBP20.34■□□□□ 0.85
CXXC1-206ENST00000586568 NCAPD2Q15021 1401 aa20.34■□□□□ 0.85
CXXC1-206ENST00000586568 DOT1LQ8TEK3 1739 aa20.33■□□□□ 0.84
CXXC1-206ENST00000586568 SHANK3Q9BYB0 1731 aa20.33■□□□□ 0.84
CXXC1-206ENST00000586568 RGPD2P0DJD1 1756 aa20.32■□□□□ 0.84
CXXC1-206ENST00000586568 GRIN3BO60391 1043 aa20.31■□□□□ 0.84
CXXC1-206ENST00000586568 YBX3P16989 372 aaKnown RBP eCLIP20.31■□□□□ 0.84
CXXC1-206ENST00000586568 CD2APQ9Y5K6 639 aa20.31■□□□□ 0.84
CXXC1-206ENST00000586568 LY75O60449 1722 aa20.3■□□□□ 0.84
CXXC1-206ENST00000586568 AMIGO3Q86WK7 504 aa20.3■□□□□ 0.84
CXXC1-206ENST00000586568 AK7Q96M32 723 aa20.29■□□□□ 0.84
CXXC1-206ENST00000586568 PCGF6Q9BYE7 350 aa20.29■□□□□ 0.84
CXXC1-206ENST00000586568 QSER1Q2KHR3 1735 aa20.29■□□□□ 0.84
CXXC1-206ENST00000586568 COL24A1Q17RW2 1714 aa20.28■□□□□ 0.84
CXXC1-206ENST00000586568 LOC102724428A0A0B4J2F2 783 aa20.28■□□□□ 0.84
CXXC1-206ENST00000586568 PHKG2P15735 406 aa20.28■□□□□ 0.84
CXXC1-206ENST00000586568 SIK1P57059 783 aa20.28■□□□□ 0.84
CXXC1-206ENST00000586568 C1QTNF8P60827 252 aa20.28■□□□□ 0.84
CXXC1-206ENST00000586568 EIF4A2Q14240 407 aaKnown RBP20.28■□□□□ 0.84
CXXC1-206ENST00000586568 IFNL2Q8IZJ0 200 aa20.28■□□□□ 0.84
CXXC1-206ENST00000586568 TMOD3Q9NYL9 352 aa20.28■□□□□ 0.84
CXXC1-206ENST00000586568 ASAP1Q9ULH1 1129 aa20.28■□□□□ 0.84
CXXC1-206ENST00000586568 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.27■□□□□ 0.84
CXXC1-206ENST00000586568 TNNT2P45379 298 aaPredicted RBP20.27■□□□□ 0.84
CXXC1-206ENST00000586568 SMIM5Q71RC9 77 aa20.27■□□□□ 0.84
CXXC1-206ENST00000586568 POLR3GLQ9BT43 218 aa20.27■□□□□ 0.84
CXXC1-206ENST00000586568 SSFA2P28290 1259 aa20.25■□□□□ 0.83
CXXC1-206ENST00000586568 LINC00116Q8NCU8 138 aa20.25■□□□□ 0.83
CXXC1-206ENST00000586568 PHF14O94880 888 aa20.24■□□□□ 0.83
CXXC1-206ENST00000586568 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
CXXC1-206ENST00000586568 ITPK1Q13572 414 aa20.24■□□□□ 0.83
CXXC1-206ENST00000586568 PANK3Q9H999 370 aa20.24■□□□□ 0.83
CXXC1-206ENST00000586568 ATG3Q9NT62 314 aa20.24■□□□□ 0.83
CXXC1-206ENST00000586568 HSPA5P11021 654 aaKnown RBP20.23■□□□□ 0.83
CXXC1-206ENST00000586568 ATP6V1AP38606 617 aa20.22■□□□□ 0.83
CXXC1-206ENST00000586568 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
CXXC1-206ENST00000586568 PLEKHG2Q9H7P9 1386 aa20.21■□□□□ 0.83
CXXC1-206ENST00000586568 KIF20BQ96Q89 1820 aa20.21■□□□□ 0.83
CXXC1-206ENST00000586568 TUBGCP6Q96RT7 1819 aa20.2■□□□□ 0.82
CXXC1-206ENST00000586568 ERVV-2B6SEH9 535 aa20.2■□□□□ 0.82
CXXC1-206ENST00000586568 GNPATO15228 680 aa20.2■□□□□ 0.82
CXXC1-206ENST00000586568 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
CXXC1-206ENST00000586568 GIGYF1O75420 1035 aaPredicted RBP20.19■□□□□ 0.82
CXXC1-206ENST00000586568 DCAF5Q96JK2 942 aa20.19■□□□□ 0.82
CXXC1-206ENST00000586568 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
CXXC1-206ENST00000586568 SLC4A9Q96Q91 983 aa20.18■□□□□ 0.82
CXXC1-206ENST00000586568 PKD1L3Q7Z443 1732 aa20.18■□□□□ 0.82
CXXC1-206ENST00000586568 HSP90AB1P08238 724 aaKnown RBP20.17■□□□□ 0.82
CXXC1-206ENST00000586568 C5P01031 1676 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms