RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 TFCP2L1Q9NZI6 479 aa21.23■□□□□ 0.99
SF3A2-202ENST00000586396 PUS7Q96PZ0 661 aaKnown RBP21.22■□□□□ 0.99
SF3A2-202ENST00000586396 TERF2IPQ9NYB0 399 aa21.22■□□□□ 0.99
SF3A2-202ENST00000586396 ANKRD36BQ8N2N9 1353 aa21.22■□□□□ 0.99
SF3A2-202ENST00000586396 LTV1Q96GA3 475 aaPredicted RBP21.21■□□□□ 0.99
SF3A2-202ENST00000586396 CARD11Q9BXL7 1154 aa21.21■□□□□ 0.99
SF3A2-202ENST00000586396 IP6K1Q92551 441 aa21.2■□□□□ 0.98
SF3A2-202ENST00000586396 SLC12A5Q9H2X9 1139 aa21.2■□□□□ 0.98
SF3A2-202ENST00000586396 C5P01031 1676 aa21.19■□□□□ 0.98
SF3A2-202ENST00000586396 KCNQ4P56696 695 aa21.19■□□□□ 0.98
SF3A2-202ENST00000586396 TIMELESSQ9UNS1 1208 aa21.19■□□□□ 0.98
SF3A2-202ENST00000586396 NSD2O96028 1365 aa21.19■□□□□ 0.98
SF3A2-202ENST00000586396 NLGN2Q8NFZ4 835 aa21.18■□□□□ 0.98
SF3A2-202ENST00000586396 MEGF6O75095 1541 aa21.18■□□□□ 0.98
SF3A2-202ENST00000586396 PRIM1P49642 420 aaKnown RBP21.17■□□□□ 0.98
SF3A2-202ENST00000586396 CCNL1Q9UK58 526 aaPredicted RBP21.15■□□□□ 0.98
SF3A2-202ENST00000586396 MSH5O43196 834 aa21.14■□□□□ 0.97
SF3A2-202ENST00000586396 SLC24A1O60721 1099 aa21.14■□□□□ 0.97
SF3A2-202ENST00000586396 USP47Q96K76 1375 aa21.13■□□□□ 0.97
SF3A2-202ENST00000586396 MAP3K19Q56UN5 1328 aa21.13■□□□□ 0.97
SF3A2-202ENST00000586396 HOXC9P31274 260 aa21.13■□□□□ 0.97
SF3A2-202ENST00000586396 COG3Q96JB2 828 aa21.13■□□□□ 0.97
SF3A2-202ENST00000586396 TESK2Q96S53 571 aa21.13■□□□□ 0.97
SF3A2-202ENST00000586396 TAF1LQ8IZX4 1826 aa21.13■□□□□ 0.97
SF3A2-202ENST00000586396 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
SF3A2-202ENST00000586396 AMPHP49418 695 aa21.12■□□□□ 0.97
SF3A2-202ENST00000586396 ZCRB1Q8TBF4 217 aaKnown RBP21.12■□□□□ 0.97
SF3A2-202ENST00000586396 GRIN3BO60391 1043 aa21.1■□□□□ 0.97
SF3A2-202ENST00000586396 YBX3P16989 372 aaKnown RBP eCLIP21.1■□□□□ 0.977e-10■■□□□ 13
SF3A2-202ENST00000586396 SMG6Q86US8 1419 aaKnown RBP21.1■□□□□ 0.97
SF3A2-202ENST00000586396 MSL1Q68DK7 614 aa21.08■□□□□ 0.97
SF3A2-202ENST00000586396 KIF20BQ96Q89 1820 aa21.08■□□□□ 0.96
SF3A2-202ENST00000586396 COL23A1Q86Y22 540 aaPredicted RBP21.07■□□□□ 0.96
SF3A2-202ENST00000586396 ATP10DQ9P241 1426 aa21.06■□□□□ 0.96
SF3A2-202ENST00000586396 FBLN1P23142 703 aa21.06■□□□□ 0.96
SF3A2-202ENST00000586396 TOGARAM1Q9Y4F4 1720 aa21.06■□□□□ 0.96
SF3A2-202ENST00000586396 CGNL1Q0VF96 1302 aa21.05■□□□□ 0.96
SF3A2-202ENST00000586396 C4BP0C0L5 1744 aa21.05■□□□□ 0.96
SF3A2-202ENST00000586396 USHBP1Q8N6Y0 703 aa21.05■□□□□ 0.96
SF3A2-202ENST00000586396 ITGB4P16144 1822 aa21.05■□□□□ 0.96
SF3A2-202ENST00000586396 RAPGEF4Q8WZA2 1011 aa21.04■□□□□ 0.96
SF3A2-202ENST00000586396 RRS1Q15050 365 aaKnown RBP21.03■□□□□ 0.96
SF3A2-202ENST00000586396 UBR3Q6ZT12 1888 aa21.03■□□□□ 0.96
SF3A2-202ENST00000586396 PCDH11XQ9BZA7 1347 aa21.03■□□□□ 0.96
SF3A2-202ENST00000586396 PCDH11YQ9BZA8 1340 aa21.03■□□□□ 0.96
SF3A2-202ENST00000586396 PALLDQ8WX93 1383 aa21.02■□□□□ 0.96
SF3A2-202ENST00000586396 PKD1L3Q7Z443 1732 aa21.02■□□□□ 0.96
SF3A2-202ENST00000586396 ST20-MTHFSA0A0A6YYL1 179 aa21.02■□□□□ 0.96
SF3A2-202ENST00000586396 NBPF6Q5VWK0 638 aa21.02■□□□□ 0.96
SF3A2-202ENST00000586396 NBPF4Q96M43 638 aa21.02■□□□□ 0.96
SF3A2-202ENST00000586396 IFFO2Q5TF58 517 aa21.01■□□□□ 0.95
SF3A2-202ENST00000586396 TATP17735 454 aaPredicted RBP21■□□□□ 0.95
SF3A2-202ENST00000586396 FLAD1Q8NFF5 587 aa21■□□□□ 0.95
SF3A2-202ENST00000586396 CD2APQ9Y5K6 639 aa21■□□□□ 0.95
SF3A2-202ENST00000586396 HMGB2P26583 209 aaKnown RBP20.99■□□□□ 0.95
SF3A2-202ENST00000586396 GPBP1L1Q9HC44 474 aaPredicted RBP20.99■□□□□ 0.95
SF3A2-202ENST00000586396 ADCY9O60503 1353 aa20.98■□□□□ 0.95
SF3A2-202ENST00000586396 MPRIPQ6WCQ1 1025 aa20.97■□□□□ 0.95
SF3A2-202ENST00000586396 AK7Q96M32 723 aa20.97■□□□□ 0.95
SF3A2-202ENST00000586396 GGNBP2Q9H3C7 697 aa20.97■□□□□ 0.95
SF3A2-202ENST00000586396 INSRP06213 1382 aa20.97■□□□□ 0.95
SF3A2-202ENST00000586396 FLT4P35916 1363 aa20.97■□□□□ 0.95
SF3A2-202ENST00000586396 NSD3Q9BZ95 1437 aa20.96■□□□□ 0.95
SF3A2-202ENST00000586396 ZNF526Q8TF50 670 aaPredicted RBP20.95■□□□□ 0.94
SF3A2-202ENST00000586396 FYB1O15117 783 aa20.94■□□□□ 0.94
SF3A2-202ENST00000586396 ANKRD26Q9UPS8 1709 aa20.93■□□□□ 0.94
SF3A2-202ENST00000586396 MAP2P11137 1827 aaKnown RBP20.93■□□□□ 0.94
SF3A2-202ENST00000586396 PHF14O94880 888 aa20.93■□□□□ 0.94
SF3A2-202ENST00000586396 KIF24Q5T7B8 1368 aa20.93■□□□□ 0.94
SF3A2-202ENST00000586396 HSP90AB2PQ58FF8 381 aa20.92■□□□□ 0.94
SF3A2-202ENST00000586396 SMARCC1Q92922 1105 aaPredicted RBP20.92■□□□□ 0.94
SF3A2-202ENST00000586396 IGSF1Q8N6C5 1336 aa20.92■□□□□ 0.94
SF3A2-202ENST00000586396 CYP27B1O15528 508 aa20.91■□□□□ 0.94
SF3A2-202ENST00000586396 TMF1P82094 1093 aa20.91■□□□□ 0.94
SF3A2-202ENST00000586396 WWC3Q9ULE0 1092 aa20.91■□□□□ 0.94
SF3A2-202ENST00000586396 CICQ96RK0 1608 aaPredicted RBP20.9■□□□□ 0.94
SF3A2-202ENST00000586396 HSPA6P17066 643 aa20.9■□□□□ 0.94
SF3A2-202ENST00000586396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.89■□□□□ 0.93
SF3A2-202ENST00000586396 CDCA8Q53HL2 280 aa20.89■□□□□ 0.93
SF3A2-202ENST00000586396 AMIGO3Q86WK7 504 aa20.89■□□□□ 0.93
SF3A2-202ENST00000586396 PCGF6Q9BYE7 350 aa20.88■□□□□ 0.93
SF3A2-202ENST00000586396 SSFA2P28290 1259 aa20.87■□□□□ 0.93
SF3A2-202ENST00000586396 KIF13BQ9NQT8 1826 aa20.87■□□□□ 0.93
SF3A2-202ENST00000586396 NCAPD2Q15021 1401 aa20.87■□□□□ 0.93
SF3A2-202ENST00000586396 SMIM5Q71RC9 77 aa20.86■□□□□ 0.93
SF3A2-202ENST00000586396 PIGBQ92521 554 aa20.86■□□□□ 0.93
SF3A2-202ENST00000586396 KIAA1551Q9HCM1 1747 aa20.85■□□□□ 0.93
SF3A2-202ENST00000586396 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
SF3A2-202ENST00000586396 EMILIN1Q9Y6C2 1016 aa20.84■□□□□ 0.93
SF3A2-202ENST00000586396 LOC102724428A0A0B4J2F2 783 aa20.83■□□□□ 0.93
SF3A2-202ENST00000586396 SIK1P57059 783 aa20.83■□□□□ 0.93
SF3A2-202ENST00000586396 LINC00116Q8NCU8 138 aa20.83■□□□□ 0.93
SF3A2-202ENST00000586396 SPG7Q9UQ90 795 aa20.83■□□□□ 0.93
SF3A2-202ENST00000586396 GNPATO15228 680 aa20.82■□□□□ 0.92
SF3A2-202ENST00000586396 TMOD3Q9NYL9 352 aa20.82■□□□□ 0.92
SF3A2-202ENST00000586396 PPM1GO15355 546 aaPredicted RBP20.81■□□□□ 0.92
SF3A2-202ENST00000586396 PXDNLA1KZ92 1463 aa20.81■□□□□ 0.92
SF3A2-202ENST00000586396 NKX1-1Q15270 411 aaPredicted RBP20.8■□□□□ 0.92
SF3A2-202ENST00000586396 COL5A3P25940 1745 aaPredicted RBP20.79■□□□□ 0.92
SF3A2-202ENST00000586396 PCNTO95613 3336 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms