RNA–Protein interactions for RNA: ENST00000586368.1

PALM3-202, Transcript of paralemmin 3, humanhuman

TSL 3

Gene PALM3, Length 469 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3-202ENST00000586368 KIF20BQ96Q89 1820 aa13.96□□□□□ -0.17
PALM3-202ENST00000586368 SMG6Q86US8 1419 aaKnown RBP13.96□□□□□ -0.18
PALM3-202ENST00000586368 MEGF6O75095 1541 aa13.95□□□□□ -0.18
PALM3-202ENST00000586368 PTGER2P43116 358 aa13.95□□□□□ -0.18
PALM3-202ENST00000586368 ZNF827Q17R98 1081 aa13.95□□□□□ -0.18
PALM3-202ENST00000586368 RAPGEF4Q8WZA2 1011 aa13.95□□□□□ -0.18
PALM3-202ENST00000586368 NSD3Q9BZ95 1437 aa13.95□□□□□ -0.18
PALM3-202ENST00000586368 PPM1GO15355 546 aaPredicted RBP13.94□□□□□ -0.18
PALM3-202ENST00000586368 KCNQ4P56696 695 aa13.94□□□□□ -0.18
PALM3-202ENST00000586368 MTFR1LQ9H019 292 aa13.94□□□□□ -0.18
PALM3-202ENST00000586368 TATP17735 454 aaPredicted RBP13.93□□□□□ -0.18
PALM3-202ENST00000586368 EMILIN1Q9Y6C2 1016 aa13.93□□□□□ -0.18
PALM3-202ENST00000586368 MYOM1P52179 1685 aa13.93□□□□□ -0.18
PALM3-202ENST00000586368 FLT4P35916 1363 aa13.93□□□□□ -0.18
PALM3-202ENST00000586368 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
PALM3-202ENST00000586368 YY1P25490 414 aa13.92□□□□□ -0.18
PALM3-202ENST00000586368 SLC27A3Q5K4L6 730 aa13.92□□□□□ -0.18
PALM3-202ENST00000586368 INSRP06213 1382 aa13.92□□□□□ -0.18
PALM3-202ENST00000586368 DOT1LQ8TEK3 1739 aa13.92□□□□□ -0.18
PALM3-202ENST00000586368 CGNL1Q0VF96 1302 aa13.91□□□□□ -0.18
PALM3-202ENST00000586368 PAPPAQ13219 1627 aa13.91□□□□□ -0.18
PALM3-202ENST00000586368 SHANK3Q9BYB0 1731 aa13.91□□□□□ -0.18
PALM3-202ENST00000586368 FHDC1Q9C0D6 1143 aaPredicted RBP13.91□□□□□ -0.18
PALM3-202ENST00000586368 TFCP2L1Q9NZI6 479 aa13.91□□□□□ -0.18
PALM3-202ENST00000586368 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
PALM3-202ENST00000586368 NSD2O96028 1365 aa13.89□□□□□ -0.19
PALM3-202ENST00000586368 CCER1Q8TC90 406 aaPredicted RBP13.89□□□□□ -0.19
PALM3-202ENST00000586368 ARXQ96QS3 562 aa13.89□□□□□ -0.19
PALM3-202ENST00000586368 SYT17Q9BSW7 474 aa13.89□□□□□ -0.19
PALM3-202ENST00000586368 CCNL1Q9UK58 526 aaPredicted RBP13.89□□□□□ -0.19
PALM3-202ENST00000586368 PCDH11XQ9BZA7 1347 aa13.89□□□□□ -0.19
PALM3-202ENST00000586368 PCDH11YQ9BZA8 1340 aa13.89□□□□□ -0.19
PALM3-202ENST00000586368 KIF24Q5T7B8 1368 aa13.88□□□□□ -0.19
PALM3-202ENST00000586368 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
PALM3-202ENST00000586368 SGIP1Q9BQI5 828 aa13.88□□□□□ -0.19
PALM3-202ENST00000586368 MSH5O43196 834 aa13.87□□□□□ -0.19
PALM3-202ENST00000586368 EIF4G2P78344 907 aaKnown RBP eCLIP13.87□□□□□ -0.19
PALM3-202ENST00000586368 MPRIPQ6WCQ1 1025 aa13.87□□□□□ -0.19
PALM3-202ENST00000586368 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
PALM3-202ENST00000586368 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
PALM3-202ENST00000586368 CYP27B1O15528 508 aa13.86□□□□□ -0.19
PALM3-202ENST00000586368 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
PALM3-202ENST00000586368 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
PALM3-202ENST00000586368 LY75O60449 1722 aa13.85□□□□□ -0.19
PALM3-202ENST00000586368 POLD1P28340 1107 aa13.85□□□□□ -0.19
PALM3-202ENST00000586368 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
PALM3-202ENST00000586368 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
PALM3-202ENST00000586368 EYA1Q99502 592 aa13.84□□□□□ -0.19
PALM3-202ENST00000586368 PANK3Q9H999 370 aa13.84□□□□□ -0.19
PALM3-202ENST00000586368 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
PALM3-202ENST00000586368 TUBGCP6Q96RT7 1819 aa13.83□□□□□ -0.2
PALM3-202ENST00000586368 SPG7Q9UQ90 795 aa13.83□□□□□ -0.2
PALM3-202ENST00000586368 PALLDQ8WX93 1383 aa13.82□□□□□ -0.2
PALM3-202ENST00000586368 QSER1Q2KHR3 1735 aa13.81□□□□□ -0.2
PALM3-202ENST00000586368 COL23A1Q86Y22 540 aaPredicted RBP13.81□□□□□ -0.2
PALM3-202ENST00000586368 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
PALM3-202ENST00000586368 GPR162Q16538 588 aa13.8□□□□□ -0.2
PALM3-202ENST00000586368 MSL1Q68DK7 614 aa13.8□□□□□ -0.2
PALM3-202ENST00000586368 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
PALM3-202ENST00000586368 PIGBQ92521 554 aa13.8□□□□□ -0.2
PALM3-202ENST00000586368 ANKRD26Q9UPS8 1709 aa13.8□□□□□ -0.2
PALM3-202ENST00000586368 ITGB4P16144 1822 aa13.8□□□□□ -0.2
PALM3-202ENST00000586368 PKD1L3Q7Z443 1732 aa13.79□□□□□ -0.2
PALM3-202ENST00000586368 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
PALM3-202ENST00000586368 SMARCC1Q92922 1105 aaPredicted RBP13.79□□□□□ -0.2
PALM3-202ENST00000586368 MAP3K5Q99683 1374 aa13.79□□□□□ -0.2
PALM3-202ENST00000586368 NCAPD2Q15021 1401 aa13.79□□□□□ -0.2
PALM3-202ENST00000586368 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
PALM3-202ENST00000586368 IFNL2Q8IZJ0 200 aa13.78□□□□□ -0.2
PALM3-202ENST00000586368 AK7Q96M32 723 aa13.78□□□□□ -0.2
PALM3-202ENST00000586368 TMOD3Q9NYL9 352 aa13.78□□□□□ -0.2
PALM3-202ENST00000586368 C5P01031 1676 aa13.78□□□□□ -0.2
PALM3-202ENST00000586368 PHKG2P15735 406 aa13.77□□□□□ -0.21
PALM3-202ENST00000586368 HMGB2P26583 209 aaKnown RBP13.77□□□□□ -0.21
PALM3-202ENST00000586368 MORC1Q86VD1 984 aa13.77□□□□□ -0.21
PALM3-202ENST00000586368 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
PALM3-202ENST00000586368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.21
PALM3-202ENST00000586368 PHF14O94880 888 aa13.76□□□□□ -0.21
PALM3-202ENST00000586368 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
PALM3-202ENST00000586368 TAF1LQ8IZX4 1826 aa13.76□□□□□ -0.21
PALM3-202ENST00000586368 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
PALM3-202ENST00000586368 SIK1P57059 783 aa13.75□□□□□ -0.21
PALM3-202ENST00000586368 SMIM5Q71RC9 77 aa13.75□□□□□ -0.21
PALM3-202ENST00000586368 ASAP1Q9ULH1 1129 aa13.75□□□□□ -0.21
PALM3-202ENST00000586368 KNSTRNQ9Y448 316 aa13.75□□□□□ -0.21
PALM3-202ENST00000586368 COL24A1Q17RW2 1714 aa13.75□□□□□ -0.21
PALM3-202ENST00000586368 CHD4Q14839 1912 aa13.74□□□□□ -0.21
PALM3-202ENST00000586368 ZNF784Q8NCA9 323 aaPredicted RBP13.74□□□□□ -0.21
PALM3-202ENST00000586368 C4BP0C0L5 1744 aa13.73□□□□□ -0.21
PALM3-202ENST00000586368 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
PALM3-202ENST00000586368 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
PALM3-202ENST00000586368 AMIGO3Q86WK7 504 aa13.73□□□□□ -0.21
PALM3-202ENST00000586368 LINC00116Q8NCU8 138 aa13.73□□□□□ -0.21
PALM3-202ENST00000586368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.72□□□□□ -0.21
PALM3-202ENST00000586368 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
PALM3-202ENST00000586368 AEBP1Q8IUX7 1158 aa13.72□□□□□ -0.21
PALM3-202ENST00000586368 ATG3Q9NT62 314 aa13.72□□□□□ -0.21
PALM3-202ENST00000586368 GNPATO15228 680 aa13.71□□□□□ -0.21
PALM3-202ENST00000586368 ITPK1Q13572 414 aa13.71□□□□□ -0.21
PALM3-202ENST00000586368 ZNF530Q6P9A1 599 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms