RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 TATP17735 454 aaPredicted RBP10.87□□□□□ -0.67
TREM1-203ENST00000586287 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
TREM1-203ENST00000586287 RAPGEF4Q8WZA2 1011 aa10.87□□□□□ -0.67
TREM1-203ENST00000586287 PLEKHG2Q9H7P9 1386 aa10.87□□□□□ -0.67
TREM1-203ENST00000586287 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
TREM1-203ENST00000586287 NFE2L2Q16236 605 aa10.86□□□□□ -0.67
TREM1-203ENST00000586287 NCBP3Q53F19 620 aaKnown RBP10.86□□□□□ -0.67
TREM1-203ENST00000586287 POTEAQ6S8J7 498 aa10.86□□□□□ -0.67
TREM1-203ENST00000586287 GJD4Q96KN9 370 aaPredicted RBP10.86□□□□□ -0.67
TREM1-203ENST00000586287 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
TREM1-203ENST00000586287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.86□□□□□ -0.67
TREM1-203ENST00000586287 TRPC5Q9UL62 973 aaPredicted RBP10.86□□□□□ -0.67
TREM1-203ENST00000586287 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
TREM1-203ENST00000586287 CCDC9Q9Y3X0 531 aaKnown RBP10.86□□□□□ -0.67
TREM1-203ENST00000586287 MAPK8IP3Q9UPT6 1336 aa10.85□□□□□ -0.67
TREM1-203ENST00000586287 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
TREM1-203ENST00000586287 RIPK4P57078 832 aa10.85□□□□□ -0.67
TREM1-203ENST00000586287 MAPK8IP2Q13387 824 aaPredicted RBP10.85□□□□□ -0.67
TREM1-203ENST00000586287 AMOTQ4VCS5 1084 aa10.85□□□□□ -0.67
TREM1-203ENST00000586287 PLEKHO1Q53GL0 409 aaPredicted RBP10.85□□□□□ -0.67
TREM1-203ENST00000586287 TRIM35Q9UPQ4 493 aa10.85□□□□□ -0.67
TREM1-203ENST00000586287 GLI3P10071 1580 aa10.85□□□□□ -0.67
TREM1-203ENST00000586287 ZNF521Q96K83 1311 aa10.84□□□□□ -0.67
TREM1-203ENST00000586287 NEFMP07197 916 aa10.84□□□□□ -0.67
TREM1-203ENST00000586287 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
TREM1-203ENST00000586287 ZNF772Q68DY9 489 aaPredicted RBP10.84□□□□□ -0.67
TREM1-203ENST00000586287 GAS2L2Q8NHY3 880 aa10.84□□□□□ -0.67
TREM1-203ENST00000586287 ZCRB1Q8TBF4 217 aaKnown RBP10.84□□□□□ -0.67
TREM1-203ENST00000586287 YTHDC1Q96MU7 727 aaKnown RBP10.84□□□□□ -0.67
TREM1-203ENST00000586287 CDCA7Q9BWT1 371 aaPredicted RBP10.84□□□□□ -0.67
TREM1-203ENST00000586287 SALL2Q9Y467 1007 aaPredicted RBP10.84□□□□□ -0.67
TREM1-203ENST00000586287 CYP27B1O15528 508 aa10.83□□□□□ -0.68
TREM1-203ENST00000586287 FAM98CQ17RN3 349 aaKnown RBP10.83□□□□□ -0.68
TREM1-203ENST00000586287 CCDC27Q2M243 656 aa10.83□□□□□ -0.68
TREM1-203ENST00000586287 WWC1Q8IX03 1113 aa10.83□□□□□ -0.68
TREM1-203ENST00000586287 NGEFQ8N5V2 710 aa10.83□□□□□ -0.68
TREM1-203ENST00000586287 SPG7Q9UQ90 795 aa10.83□□□□□ -0.68
TREM1-203ENST00000586287 PKD1L3Q7Z443 1732 aa10.82□□□□□ -0.68
TREM1-203ENST00000586287 PARP4Q9UKK3 1724 aaKnown RBP10.82□□□□□ -0.68
TREM1-203ENST00000586287 PHKG2P15735 406 aa10.82□□□□□ -0.68
TREM1-203ENST00000586287 AKAP4Q5JQC9 854 aa10.82□□□□□ -0.68
TREM1-203ENST00000586287 ZNF530Q6P9A1 599 aaPredicted RBP10.82□□□□□ -0.68
TREM1-203ENST00000586287 ZBED9Q6R2W3 1325 aa10.82□□□□□ -0.68
TREM1-203ENST00000586287 WNK3Q9BYP7 1800 aa10.81□□□□□ -0.68
TREM1-203ENST00000586287 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
TREM1-203ENST00000586287 EXOC5O00471 708 aa10.81□□□□□ -0.68
TREM1-203ENST00000586287 HTATSF1O43719 755 aaKnown RBP10.81□□□□□ -0.68
TREM1-203ENST00000586287 DCTN1Q14203 1278 aa10.81□□□□□ -0.68
TREM1-203ENST00000586287 IFNL2Q8IZJ0 200 aa10.81□□□□□ -0.68
TREM1-203ENST00000586287 IL17REQ8NFR9 667 aa10.81□□□□□ -0.68
TREM1-203ENST00000586287 SHANK3Q9BYB0 1731 aa10.81□□□□□ -0.68
TREM1-203ENST00000586287 MAP3K5Q99683 1374 aa10.8□□□□□ -0.68
TREM1-203ENST00000586287 THSD7AQ9UPZ6 1657 aa10.8□□□□□ -0.68
TREM1-203ENST00000586287 RBM6P78332 1123 aaKnown RBP10.8□□□□□ -0.68
TREM1-203ENST00000586287 NKX1-1Q15270 411 aaPredicted RBP10.8□□□□□ -0.68
TREM1-203ENST00000586287 DDB1Q16531 1140 aa10.8□□□□□ -0.68
TREM1-203ENST00000586287 DDX54Q8TDD1 881 aaKnown RBP10.8□□□□□ -0.68
TREM1-203ENST00000586287 THUMPD2Q9BTF0 503 aaKnown RBP10.8□□□□□ -0.68
TREM1-203ENST00000586287 LGR6Q9HBX8 967 aa10.8□□□□□ -0.68
TREM1-203ENST00000586287 TNS2Q63HR2 1409 aa10.8□□□□□ -0.68
TREM1-203ENST00000586287 PCDH11XQ9BZA7 1347 aa10.8□□□□□ -0.68
TREM1-203ENST00000586287 PCDH11YQ9BZA8 1340 aa10.8□□□□□ -0.68
TREM1-203ENST00000586287 CEMIPQ8WUJ3 1361 aa10.79□□□□□ -0.68
TREM1-203ENST00000586287 RNMTO43148 476 aaKnown RBP10.79□□□□□ -0.68
TREM1-203ENST00000586287 C1orf141Q5JVX7 400 aa10.79□□□□□ -0.68
TREM1-203ENST00000586287 MPRIPQ6WCQ1 1025 aa10.79□□□□□ -0.68
TREM1-203ENST00000586287 MCM10Q7L590 875 aa10.79□□□□□ -0.68
TREM1-203ENST00000586287 SEPT12Q8IYM1 358 aa10.79□□□□□ -0.68
TREM1-203ENST00000586287 MARCH10Q8NA82 808 aaPredicted RBP10.79□□□□□ -0.68
TREM1-203ENST00000586287 SPINK5Q9NQ38 1064 aaPredicted RBP10.79□□□□□ -0.68
TREM1-203ENST00000586287 DLG5Q8TDM6 1919 aa10.79□□□□□ -0.68
TREM1-203ENST00000586287 LRRC37A3O60309 1634 aa10.79□□□□□ -0.68
TREM1-203ENST00000586287 KDM6AO15550 1401 aaPredicted RBP10.78□□□□□ -0.68
TREM1-203ENST00000586287 LMOD3Q0VAK6 560 aa10.78□□□□□ -0.68
TREM1-203ENST00000586287 WDR63Q8IWG1 891 aa10.78□□□□□ -0.68
TREM1-203ENST00000586287 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
TREM1-203ENST00000586287 ADAMTS7Q9UKP4 1686 aa10.77□□□□□ -0.69
TREM1-203ENST00000586287 RXRBP28702 533 aa10.77□□□□□ -0.69
TREM1-203ENST00000586287 RTF1Q92541 710 aaKnown RBP10.77□□□□□ -0.69
TREM1-203ENST00000586287 HSP90AB1P08238 724 aaKnown RBP10.76□□□□□ -0.69
TREM1-203ENST00000586287 ZNF853P0CG23 659 aa10.76□□□□□ -0.69
TREM1-203ENST00000586287 TRMT2AQ8IZ69 625 aaKnown RBP10.76□□□□□ -0.69
TREM1-203ENST00000586287 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
TREM1-203ENST00000586287 IL16Q14005 1332 aa10.76□□□□□ -0.69
TREM1-203ENST00000586287 A0A0G2JS52 829 aa10.75□□□□□ -0.69
TREM1-203ENST00000586287 MYT1Q01538 1121 aa10.75□□□□□ -0.69
TREM1-203ENST00000586287 GOLGA2Q08379 1002 aa10.75□□□□□ -0.69
TREM1-203ENST00000586287 SLFN5Q08AF3 891 aa10.75□□□□□ -0.69
TREM1-203ENST00000586287 PDE3BQ13370 1112 aa10.75□□□□□ -0.69
TREM1-203ENST00000586287 ERVV-2B6SEH9 535 aa10.74□□□□□ -0.69
TREM1-203ENST00000586287 CHL1O00533 1208 aa10.74□□□□□ -0.69
TREM1-203ENST00000586287 CFAP44Q96MT7 982 aa10.74□□□□□ -0.69
TREM1-203ENST00000586287 SLC52A2Q9HAB3 445 aa10.74□□□□□ -0.69
TREM1-203ENST00000586287 RGS12O14924 1447 aa10.74□□□□□ -0.69
TREM1-203ENST00000586287 MRC1P22897 1456 aa10.74□□□□□ -0.69
TREM1-203ENST00000586287 SCN11AQ9UI33 1791 aa10.73□□□□□ -0.69
TREM1-203ENST00000586287 CALD1Q05682 793 aaKnown RBP10.73□□□□□ -0.69
TREM1-203ENST00000586287 TAF7Q15545 349 aaPredicted RBP10.73□□□□□ -0.69
TREM1-203ENST00000586287 FAM182BQ5T319 152 aa10.73□□□□□ -0.69
TREM1-203ENST00000586287 DUSP27Q5VZP5 1158 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms