RNA–Protein interactions for RNA: ENST00000586002.3

PCSK4-203, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-203ENST00000586002 COL3A1P02461 1466 aaPredicted RBP23.37■■□□□ 1.33
PCSK4-203ENST00000586002 OVOS2A0A0G2JMS6 1433 aa23.37■■□□□ 1.33
PCSK4-203ENST00000586002 UPF1Q92900 1129 aaKnown RBP eCLIP23.37■■□□□ 1.33
PCSK4-203ENST00000586002 MEGF6O75095 1541 aa23.37■■□□□ 1.33
PCSK4-203ENST00000586002 HMOX1P09601 288 aa23.36■■□□□ 1.33
PCSK4-203ENST00000586002 PLEKHO1Q53GL0 409 aaPredicted RBP23.36■■□□□ 1.33
PCSK4-203ENST00000586002 CCDC125Q86Z20 511 aa23.36■■□□□ 1.33
PCSK4-203ENST00000586002 TNS2Q63HR2 1409 aa23.35■■□□□ 1.33
PCSK4-203ENST00000586002 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
PCSK4-203ENST00000586002 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
PCSK4-203ENST00000586002 KDRP35968 1356 aa23.35■■□□□ 1.33
PCSK4-203ENST00000586002 AMOTQ4VCS5 1084 aa23.34■■□□□ 1.33
PCSK4-203ENST00000586002 PLEKHG2Q9H7P9 1386 aa23.33■■□□□ 1.33
PCSK4-203ENST00000586002 WNK3Q9BYP7 1800 aa23.33■■□□□ 1.32
PCSK4-203ENST00000586002 PCDH11XQ9BZA7 1347 aa23.32■■□□□ 1.32
PCSK4-203ENST00000586002 PCDH11YQ9BZA8 1340 aa23.32■■□□□ 1.32
PCSK4-203ENST00000586002 LRRC37A3O60309 1634 aa23.31■■□□□ 1.32
PCSK4-203ENST00000586002 FCHSD2O94868 740 aa23.31■■□□□ 1.32
PCSK4-203ENST00000586002 CYP27B1O15528 508 aa23.3■■□□□ 1.32
PCSK4-203ENST00000586002 IFNL2Q8IZJ0 200 aa23.3■■□□□ 1.32
PCSK4-203ENST00000586002 BCL9O00512 1426 aa23.3■■□□□ 1.32
PCSK4-203ENST00000586002 TRIM37O94972 964 aa23.29■■□□□ 1.32
PCSK4-203ENST00000586002 RGPD1P0DJD0 1748 aa23.29■■□□□ 1.32
PCSK4-203ENST00000586002 SF3B2Q13435 895 aaKnown RBP23.29■■□□□ 1.32
PCSK4-203ENST00000586002 NKX1-1Q15270 411 aaPredicted RBP23.27■■□□□ 1.32
PCSK4-203ENST00000586002 RSPH6AQ9H0K4 717 aa23.27■■□□□ 1.32
PCSK4-203ENST00000586002 PHKG2P15735 406 aa23.26■■□□□ 1.31
PCSK4-203ENST00000586002 ZNF530Q6P9A1 599 aaPredicted RBP23.26■■□□□ 1.31
PCSK4-203ENST00000586002 BCL11BQ9C0K0 894 aaPredicted RBP23.26■■□□□ 1.31
PCSK4-203ENST00000586002 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
PCSK4-203ENST00000586002 PRKAR2BP31323 418 aa23.25■■□□□ 1.31
PCSK4-203ENST00000586002 ACSBG1Q96GR2 724 aa23.25■■□□□ 1.31
PCSK4-203ENST00000586002 KAT6BQ8WYB5 2073 aa23.24■■□□□ 1.31
PCSK4-203ENST00000586002 HSP90AB1P08238 724 aaKnown RBP23.24■■□□□ 1.31
PCSK4-203ENST00000586002 C1orf141Q5JVX7 400 aa23.24■■□□□ 1.31
PCSK4-203ENST00000586002 WDR43Q15061 677 aaKnown RBP eCLIP23.23■■□□□ 1.31
PCSK4-203ENST00000586002 MTHFSDQ2M296 383 aaKnown RBP23.23■■□□□ 1.31
PCSK4-203ENST00000586002 KCNQ2O43526 872 aa23.22■■□□□ 1.31
PCSK4-203ENST00000586002 APBA3O96018 575 aa23.22■■□□□ 1.31
PCSK4-203ENST00000586002 NEFMP07197 916 aa23.22■■□□□ 1.31
PCSK4-203ENST00000586002 PRIM1P49642 420 aaKnown RBP23.22■■□□□ 1.31
PCSK4-203ENST00000586002 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
PCSK4-203ENST00000586002 GAS2L2Q8NHY3 880 aa23.21■■□□□ 1.31
PCSK4-203ENST00000586002 PHACTR3Q96KR7 559 aa23.21■■□□□ 1.31
PCSK4-203ENST00000586002 BAG6P46379 1132 aa23.2■■□□□ 1.3
PCSK4-203ENST00000586002 DIEXFQ68CQ4 756 aaKnown RBP23.2■■□□□ 1.3
PCSK4-203ENST00000586002 CCDC184Q52MB2 194 aa23.19■■□□□ 1.3
PCSK4-203ENST00000586002 PTF1AQ7RTS3 328 aa23.19■■□□□ 1.3
PCSK4-203ENST00000586002 SYTL4Q96C24 671 aaPredicted RBP23.19■■□□□ 1.3
PCSK4-203ENST00000586002 DCAF5Q96JK2 942 aa23.19■■□□□ 1.3
PCSK4-203ENST00000586002 EP400Q96L91 3159 aa23.19■■□□□ 1.3
PCSK4-203ENST00000586002 PKD1L3Q7Z443 1732 aa23.19■■□□□ 1.3
PCSK4-203ENST00000586002 MRS2Q9HD23 443 aa23.18■■□□□ 1.3
PCSK4-203ENST00000586002 ADAMTS8Q9UP79 889 aa23.18■■□□□ 1.3
PCSK4-203ENST00000586002 DEFB132Q7Z7B7 95 aa23.17■■□□□ 1.3
PCSK4-203ENST00000586002 PLEKHF1Q96S99 279 aa23.17■■□□□ 1.3
PCSK4-203ENST00000586002 SHANK3Q9BYB0 1731 aa23.16■■□□□ 1.3
PCSK4-203ENST00000586002 ERVV-2B6SEH9 535 aa23.16■■□□□ 1.3
PCSK4-203ENST00000586002 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
PCSK4-203ENST00000586002 PLSCR1O15162 318 aa23.15■■□□□ 1.3
PCSK4-203ENST00000586002 EN1Q05925 392 aaPredicted RBP23.15■■□□□ 1.3
PCSK4-203ENST00000586002 GNAT3A8MTJ3 354 aa23.14■■□□□ 1.29
PCSK4-203ENST00000586002 SBF2Q86WG5 1849 aa23.13■■□□□ 1.29
PCSK4-203ENST00000586002 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
PCSK4-203ENST00000586002 MAPK8IP3Q9UPT6 1336 aa23.12■■□□□ 1.29
PCSK4-203ENST00000586002 RNMTO43148 476 aaKnown RBP23.12■■□□□ 1.29
PCSK4-203ENST00000586002 CAMKK2Q96RR4 588 aa23.12■■□□□ 1.29
PCSK4-203ENST00000586002 LGR6Q9HBX8 967 aa23.12■■□□□ 1.29
PCSK4-203ENST00000586002 CABP4P57796 275 aa23.11■■□□□ 1.29
PCSK4-203ENST00000586002 PIGBQ92521 554 aa23.11■■□□□ 1.29
PCSK4-203ENST00000586002 RUNDC1Q96C34 613 aa23.11■■□□□ 1.29
PCSK4-203ENST00000586002 TMOD3Q9NYL9 352 aa23.11■■□□□ 1.29
PCSK4-203ENST00000586002 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
PCSK4-203ENST00000586002 EZH2Q15910 746 aaKnown RBP23.09■■□□□ 1.29
PCSK4-203ENST00000586002 NFE2L2Q16236 605 aa23.09■■□□□ 1.29
PCSK4-203ENST00000586002 CCDC146Q8IYE0 955 aa23.08■■□□□ 1.29
PCSK4-203ENST00000586002 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.29
PCSK4-203ENST00000586002 IL17REQ8NFR9 667 aa23.08■■□□□ 1.29
PCSK4-203ENST00000586002 RTF1Q92541 710 aaKnown RBP23.08■■□□□ 1.29
PCSK4-203ENST00000586002 MAP3K5Q99683 1374 aa23.08■■□□□ 1.29
PCSK4-203ENST00000586002 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
PCSK4-203ENST00000586002 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
PCSK4-203ENST00000586002 SMARCC1Q92922 1105 aaPredicted RBP23.06■■□□□ 1.28
PCSK4-203ENST00000586002 SLC52A2Q9HAB3 445 aa23.06■■□□□ 1.28
PCSK4-203ENST00000586002 NHSQ6T4R5 1651 aa23.06■■□□□ 1.28
PCSK4-203ENST00000586002 PROM2Q8N271 834 aa23.05■■□□□ 1.28
PCSK4-203ENST00000586002 TMPOP42166 694 aaKnown RBP23.04■■□□□ 1.28
PCSK4-203ENST00000586002 RIPK4P57078 832 aa23.04■■□□□ 1.28
PCSK4-203ENST00000586002 TXNRD1Q16881 649 aa23.04■■□□□ 1.28
PCSK4-203ENST00000586002 TNS1Q9HBL0 1735 aaKnown RBP23.03■■□□□ 1.28
PCSK4-203ENST00000586002 TEFQ10587 303 aa23.03■■□□□ 1.28
PCSK4-203ENST00000586002 DOT1LQ8TEK3 1739 aa23.02■■□□□ 1.28
PCSK4-203ENST00000586002 MIER1Q8N108 512 aa23.02■■□□□ 1.28
PCSK4-203ENST00000586002 ATG3Q9NT62 314 aa23.02■■□□□ 1.28
PCSK4-203ENST00000586002 ASAP1Q9ULH1 1129 aa23.02■■□□□ 1.28
PCSK4-203ENST00000586002 NEUROD2Q15784 382 aa23■■□□□ 1.27
PCSK4-203ENST00000586002 SLC27A3Q5K4L6 730 aa23■■□□□ 1.27
PCSK4-203ENST00000586002 MCM10Q7L590 875 aa23■■□□□ 1.27
PCSK4-203ENST00000586002 FAM9BQ8IZU0 186 aa23■■□□□ 1.27
PCSK4-203ENST00000586002 BTAF1O14981 1849 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms