RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 BTAF1O14981 1849 aa28.11■■■□□ 2.09
CLPTM1-204ENST00000585961 KLHL34Q8N239 644 aa28.11■■■□□ 2.09
CLPTM1-204ENST00000585961 HSP90AB2PQ58FF8 381 aa28.1■■■□□ 2.09
CLPTM1-204ENST00000585961 RAPGEF4Q8WZA2 1011 aa28.08■■■□□ 2.09
CLPTM1-204ENST00000585961 USP47Q96K76 1375 aa28.08■■■□□ 2.09
CLPTM1-204ENST00000585961 MSH5O43196 834 aa28.06■■■□□ 2.08
CLPTM1-204ENST00000585961 CARD14Q9BXL6 1004 aa28.06■■■□□ 2.08
CLPTM1-204ENST00000585961 PNPLA7Q6ZV29 1317 aa28.06■■■□□ 2.08
CLPTM1-204ENST00000585961 MEGF6O75095 1541 aa28.05■■■□□ 2.08
CLPTM1-204ENST00000585961 TATP17735 454 aaPredicted RBP28.05■■■□□ 2.08
CLPTM1-204ENST00000585961 CCNL1Q9UK58 526 aaPredicted RBP28.05■■■□□ 2.08
CLPTM1-204ENST00000585961 UTRNP46939 3433 aa28.04■■■□□ 2.08
CLPTM1-204ENST00000585961 SLC16A10Q8TF71 515 aa28.04■■■□□ 2.08
CLPTM1-204ENST00000585961 POLD1P28340 1107 aa28.03■■■□□ 2.08
CLPTM1-204ENST00000585961 GPR162Q16538 588 aa28.03■■■□□ 2.08
CLPTM1-204ENST00000585961 NSD2O96028 1365 aa28.02■■■□□ 2.08
CLPTM1-204ENST00000585961 PPM1GO15355 546 aaPredicted RBP28.02■■■□□ 2.08
CLPTM1-204ENST00000585961 CDCA8Q53HL2 280 aa28.02■■■□□ 2.08
CLPTM1-204ENST00000585961 ZNF784Q8NCA9 323 aaPredicted RBP28.02■■■□□ 2.08
CLPTM1-204ENST00000585961 RGPD2P0DJD1 1756 aa28.01■■■□□ 2.08
CLPTM1-204ENST00000585961 PAPPAQ13219 1627 aa28.01■■■□□ 2.07
CLPTM1-204ENST00000585961 PELP1Q8IZL8 1130 aaKnown RBP28.01■■■□□ 2.07
CLPTM1-204ENST00000585961 EMILIN1Q9Y6C2 1016 aa27.99■■■□□ 2.07
CLPTM1-204ENST00000585961 RTL1A6NKG5 1358 aa27.99■■■□□ 2.07
CLPTM1-204ENST00000585961 MPRIPQ6WCQ1 1025 aa27.98■■■□□ 2.07
CLPTM1-204ENST00000585961 COL23A1Q86Y22 540 aaPredicted RBP27.98■■■□□ 2.07
CLPTM1-204ENST00000585961 CGNL1Q0VF96 1302 aa27.97■■■□□ 2.07
CLPTM1-204ENST00000585961 POLR3GLQ9BT43 218 aa27.97■■■□□ 2.07
CLPTM1-204ENST00000585961 SMG6Q86US8 1419 aaKnown RBP27.96■■■□□ 2.07
CLPTM1-204ENST00000585961 FAM208AQ9UK61 1670 aaKnown RBP27.96■■■□□ 2.07
CLPTM1-204ENST00000585961 INSRP06213 1382 aa27.96■■■□□ 2.07
CLPTM1-204ENST00000585961 NLGN2Q8NFZ4 835 aa27.95■■■□□ 2.06
CLPTM1-204ENST00000585961 CYP27B1O15528 508 aa27.94■■■□□ 2.06
CLPTM1-204ENST00000585961 MSL1Q68DK7 614 aa27.94■■■□□ 2.06
CLPTM1-204ENST00000585961 PCGF6Q9BYE7 350 aa27.94■■■□□ 2.06
CLPTM1-204ENST00000585961 FLT4P35916 1363 aa27.91■■■□□ 2.06
CLPTM1-204ENST00000585961 PCDH11XQ9BZA7 1347 aa27.91■■■□□ 2.06
CLPTM1-204ENST00000585961 PCDH11YQ9BZA8 1340 aa27.91■■■□□ 2.06
CLPTM1-204ENST00000585961 DOT1LQ8TEK3 1739 aa27.9■■■□□ 2.06
CLPTM1-204ENST00000585961 MAP3K5Q99683 1374 aa27.9■■■□□ 2.06
CLPTM1-204ENST00000585961 NSD3Q9BZ95 1437 aa27.9■■■□□ 2.06
CLPTM1-204ENST00000585961 SMIM5Q71RC9 77 aa27.89■■■□□ 2.06
CLPTM1-204ENST00000585961 TNNT2P45379 298 aaPredicted RBP27.87■■■□□ 2.05
CLPTM1-204ENST00000585961 SHANK3Q9BYB0 1731 aa27.87■■■□□ 2.05
CLPTM1-204ENST00000585961 PIGBQ92521 554 aa27.86■■■□□ 2.05
CLPTM1-204ENST00000585961 EYA1Q99502 592 aa27.85■■■□□ 2.05
CLPTM1-204ENST00000585961 PALLDQ8WX93 1383 aa27.84■■■□□ 2.05
CLPTM1-204ENST00000585961 SPG7Q9UQ90 795 aa27.83■■■□□ 2.05
CLPTM1-204ENST00000585961 KIF24Q5T7B8 1368 aa27.83■■■□□ 2.05
CLPTM1-204ENST00000585961 POLKQ9UBT6 870 aa27.82■■■□□ 2.04
CLPTM1-204ENST00000585961 LY75O60449 1722 aa27.81■■■□□ 2.04
CLPTM1-204ENST00000585961 AMIGO3Q86WK7 504 aa27.81■■■□□ 2.04
CLPTM1-204ENST00000585961 SMARCC1Q92922 1105 aaPredicted RBP27.81■■■□□ 2.04
CLPTM1-204ENST00000585961 WASHC2AQ641Q2 1341 aa27.81■■■□□ 2.04
CLPTM1-204ENST00000585961 GOLGB1Q14789 3259 aaKnown RBP27.8■■■□□ 2.04
CLPTM1-204ENST00000585961 PHF14O94880 888 aa27.8■■■□□ 2.04
CLPTM1-204ENST00000585961 YBX3P16989 372 aaKnown RBP eCLIP27.8■■■□□ 2.046e-9■■□□□ 12.7
CLPTM1-204ENST00000585961 TIMELESSQ9UNS1 1208 aa27.8■■■□□ 2.04
CLPTM1-204ENST00000585961 TUBGCP6Q96RT7 1819 aa27.79■■■□□ 2.04
CLPTM1-204ENST00000585961 AK7Q96M32 723 aa27.79■■■□□ 2.04
CLPTM1-204ENST00000585961 NKX1-1Q15270 411 aaPredicted RBP27.78■■■□□ 2.04
CLPTM1-204ENST00000585961 FLAD1Q8NFF5 587 aa27.78■■■□□ 2.04
CLPTM1-204ENST00000585961 ASAP1Q9ULH1 1129 aa27.77■■■□□ 2.04
CLPTM1-204ENST00000585961 KIF20BQ96Q89 1820 aa27.76■■■□□ 2.04
CLPTM1-204ENST00000585961 QSER1Q2KHR3 1735 aa27.75■■■□□ 2.03
CLPTM1-204ENST00000585961 C1QTNF8P60827 252 aa27.75■■■□□ 2.03
CLPTM1-204ENST00000585961 TMOD3Q9NYL9 352 aa27.75■■■□□ 2.03
CLPTM1-204ENST00000585961 LOC102724428A0A0B4J2F2 783 aa27.74■■■□□ 2.03
CLPTM1-204ENST00000585961 SIK1P57059 783 aa27.74■■■□□ 2.03
CLPTM1-204ENST00000585961 EIF4A2Q14240 407 aaKnown RBP27.74■■■□□ 2.03
CLPTM1-204ENST00000585961 CHD4Q14839 1912 aa27.73■■■□□ 2.03
CLPTM1-204ENST00000585961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.73■■■□□ 2.03
CLPTM1-204ENST00000585961 GRIN3BO60391 1043 aa27.73■■■□□ 2.03
CLPTM1-204ENST00000585961 HMGB2P26583 209 aaKnown RBP27.73■■■□□ 2.03
CLPTM1-204ENST00000585961 IFNL2Q8IZJ0 200 aa27.73■■■□□ 2.03
CLPTM1-204ENST00000585961 LINC00116Q8NCU8 138 aa27.73■■■□□ 2.03
CLPTM1-204ENST00000585961 WWC3Q9ULE0 1092 aa27.73■■■□□ 2.03
CLPTM1-204ENST00000585961 SENP3-EIF4A1A0A087X0R7 540 aa27.72■■■□□ 2.03
CLPTM1-204ENST00000585961 PHKG2P15735 406 aa27.72■■■□□ 2.03
CLPTM1-204ENST00000585961 PANK3Q9H999 370 aa27.72■■■□□ 2.03
CLPTM1-204ENST00000585961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.71■■■□□ 2.03
CLPTM1-204ENST00000585961 CD2APQ9Y5K6 639 aa27.71■■■□□ 2.03
CLPTM1-204ENST00000585961 HSPA5P11021 654 aaKnown RBP27.7■■■□□ 2.02
CLPTM1-204ENST00000585961 ATP6V1AP38606 617 aa27.7■■■□□ 2.02
CLPTM1-204ENST00000585961 ITPK1Q13572 414 aa27.69■■■□□ 2.02
CLPTM1-204ENST00000585961 ATG3Q9NT62 314 aa27.69■■■□□ 2.02
CLPTM1-204ENST00000585961 COL24A1Q17RW2 1714 aa27.69■■■□□ 2.02
CLPTM1-204ENST00000585961 EIF4G2P78344 907 aaKnown RBP eCLIP27.67■■■□□ 2.02
CLPTM1-204ENST00000585961 MAP2P11137 1827 aaKnown RBP27.66■■■□□ 2.02
CLPTM1-204ENST00000585961 GNPATO15228 680 aa27.65■■■□□ 2.02
CLPTM1-204ENST00000585961 GIGYF1O75420 1035 aaPredicted RBP27.65■■■□□ 2.02
CLPTM1-204ENST00000585961 NCAPD2Q15021 1401 aa27.65■■■□□ 2.02
CLPTM1-204ENST00000585961 C5P01031 1676 aa27.65■■■□□ 2.02
CLPTM1-204ENST00000585961 RBM42Q9BTD8 480 aaKnown RBP27.64■■■□□ 2.02
CLPTM1-204ENST00000585961 ITGB4P16144 1822 aa27.64■■■□□ 2.01
CLPTM1-204ENST00000585961 TOGARAM1Q9Y4F4 1720 aa27.64■■■□□ 2.01
CLPTM1-204ENST00000585961 SSFA2P28290 1259 aa27.63■■■□□ 2.01
CLPTM1-204ENST00000585961 CLSPNQ9HAW4 1339 aa27.62■■■□□ 2.01
CLPTM1-204ENST00000585961 C4BP0C0L5 1744 aa27.61■■■□□ 2.01
CLPTM1-204ENST00000585961 PLEKHO1Q53GL0 409 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms