RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 RAPGEF4Q8WZA2 1011 aa29.79■■■□□ 2.36
CIRBP-205ENST00000585913 BTAF1O14981 1849 aa29.78■■■□□ 2.36
CIRBP-205ENST00000585913 KAT6BQ8WYB5 2073 aa29.78■■■□□ 2.36
CIRBP-205ENST00000585913 TXNRD1Q16881 649 aa29.77■■■□□ 2.36
CIRBP-205ENST00000585913 PROM2Q8N271 834 aa29.77■■■□□ 2.36
CIRBP-205ENST00000585913 TATP17735 454 aaPredicted RBP29.75■■■□□ 2.35
CIRBP-205ENST00000585913 NSD2O96028 1365 aa29.75■■■□□ 2.35
CIRBP-205ENST00000585913 WASHC2AQ641Q2 1341 aa29.74■■■□□ 2.35
CIRBP-205ENST00000585913 TNNT2P45379 298 aaPredicted RBP29.74■■■□□ 2.35
CIRBP-205ENST00000585913 ANO8Q9HCE9 1232 aaPredicted RBP29.74■■■□□ 2.35
CIRBP-205ENST00000585913 POLKQ9UBT6 870 aa29.74■■■□□ 2.35
CIRBP-205ENST00000585913 DOT1LQ8TEK3 1739 aa29.74■■■□□ 2.35
CIRBP-205ENST00000585913 SYTL4Q96C24 671 aaPredicted RBP29.7■■■□□ 2.35
CIRBP-205ENST00000585913 KIF7Q2M1P5 1343 aa29.7■■■□□ 2.34
CIRBP-205ENST00000585913 STK32BQ9NY57 414 aa29.68■■■□□ 2.34
CIRBP-205ENST00000585913 KNSTRNQ9Y448 316 aa29.68■■■□□ 2.34
CIRBP-205ENST00000585913 PRIM1P49642 420 aaKnown RBP29.67■■■□□ 2.34
CIRBP-205ENST00000585913 NCAPD2Q15021 1401 aa29.67■■■□□ 2.34
CIRBP-205ENST00000585913 PCDH11XQ9BZA7 1347 aa29.67■■■□□ 2.34
CIRBP-205ENST00000585913 PCDH11YQ9BZA8 1340 aa29.67■■■□□ 2.34
CIRBP-205ENST00000585913 MORC1Q86VD1 984 aa29.65■■■□□ 2.34
CIRBP-205ENST00000585913 PKD1L3Q7Z443 1732 aa29.64■■■□□ 2.34
CIRBP-205ENST00000585913 CASZ1Q86V15 1759 aa29.64■■■□□ 2.34
CIRBP-205ENST00000585913 SLC15A2Q16348 729 aa29.63■■■□□ 2.33
CIRBP-205ENST00000585913 EYA1Q99502 592 aa29.63■■■□□ 2.33
CIRBP-205ENST00000585913 SPON1Q9HCB6 807 aa29.62■■■□□ 2.33
CIRBP-205ENST00000585913 PAPPAQ13219 1627 aa29.62■■■□□ 2.33
CIRBP-205ENST00000585913 EIF4A2Q14240 407 aaKnown RBP29.61■■■□□ 2.33
CIRBP-205ENST00000585913 SLC27A3Q5K4L6 730 aa29.58■■■□□ 2.33
CIRBP-205ENST00000585913 CYP27B1O15528 508 aa29.57■■■□□ 2.32
CIRBP-205ENST00000585913 LRRC4BQ9NT99 713 aa29.57■■■□□ 2.32
CIRBP-205ENST00000585913 SPG7Q9UQ90 795 aa29.57■■■□□ 2.32
CIRBP-205ENST00000585913 LY75O60449 1722 aa29.57■■■□□ 2.32
CIRBP-205ENST00000585913 PDGFDQ9GZP0 370 aaPredicted RBP29.56■■■□□ 2.32
CIRBP-205ENST00000585913 AMER1Q5JTC6 1135 aaPredicted RBP29.55■■■□□ 2.32
CIRBP-205ENST00000585913 PPP1R1BQ9UD71 204 aaPredicted RBP29.55■■■□□ 2.32
CIRBP-205ENST00000585913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.53■■■□□ 2.324e-13■□□□□ 8.8
CIRBP-205ENST00000585913 IGSF1Q8N6C5 1336 aa29.52■■■□□ 2.32
CIRBP-205ENST00000585913 TOGARAM1Q9Y4F4 1720 aa29.52■■■□□ 2.32
CIRBP-205ENST00000585913 ZBTB7AO95365 584 aa29.52■■■□□ 2.32
CIRBP-205ENST00000585913 ZNF827Q17R98 1081 aa29.51■■■□□ 2.31
CIRBP-205ENST00000585913 MPRIPQ6WCQ1 1025 aa29.49■■■□□ 2.31
CIRBP-205ENST00000585913 ITGB4P16144 1822 aa29.49■■■□□ 2.31
CIRBP-205ENST00000585913 PLEKHG2Q9H7P9 1386 aa29.49■■■□□ 2.31
CIRBP-205ENST00000585913 KCNQ4P56696 695 aa29.48■■■□□ 2.31
CIRBP-205ENST00000585913 NKX1-1Q15270 411 aaPredicted RBP29.48■■■□□ 2.31
CIRBP-205ENST00000585913 CCNL1Q9UK58 526 aaPredicted RBP29.48■■■□□ 2.31
CIRBP-205ENST00000585913 PER1O15534 1290 aaPredicted RBP29.47■■■□□ 2.31
CIRBP-205ENST00000585913 QSER1Q2KHR3 1735 aa29.46■■■□□ 2.31
CIRBP-205ENST00000585913 IFNL2Q8IZJ0 200 aa29.46■■■□□ 2.31
CIRBP-205ENST00000585913 AKT1S1Q96B36 256 aa29.46■■■□□ 2.31
CIRBP-205ENST00000585913 ATF5Q9Y2D1 282 aaPredicted RBP29.46■■■□□ 2.31
CIRBP-205ENST00000585913 MTFR1LQ9H019 292 aa29.45■■■□□ 2.31
CIRBP-205ENST00000585913 PHKG2P15735 406 aa29.44■■■□□ 2.3
CIRBP-205ENST00000585913 CC2D1BQ5T0F9 858 aaKnown RBP29.44■■■□□ 2.3
CIRBP-205ENST00000585913 PALLDQ8WX93 1383 aa29.43■■■□□ 2.3
CIRBP-205ENST00000585913 TFCP2L1Q9NZI6 479 aa29.42■■■□□ 2.3
CIRBP-205ENST00000585913 TUBGCP6Q96RT7 1819 aa29.41■■■□□ 2.3
CIRBP-205ENST00000585913 PTGER2P43116 358 aa29.41■■■□□ 2.3
CIRBP-205ENST00000585913 SMARCC1Q92922 1105 aaPredicted RBP29.41■■■□□ 2.3
CIRBP-205ENST00000585913 PLEKHO1Q53GL0 409 aaPredicted RBP29.4■■■□□ 2.3
CIRBP-205ENST00000585913 C5P01031 1676 aa29.4■■■□□ 2.3
CIRBP-205ENST00000585913 MTHFSP49914 203 aa29.39■■■□□ 2.3
CIRBP-205ENST00000585913 PIGBQ92521 554 aa29.39■■■□□ 2.3
CIRBP-205ENST00000585913 TMOD3Q9NYL9 352 aa29.39■■■□□ 2.3
CIRBP-205ENST00000585913 HMGB2P26583 209 aaKnown RBP29.38■■■□□ 2.29
CIRBP-205ENST00000585913 IL13P35225 146 aa29.38■■■□□ 2.29
CIRBP-205ENST00000585913 AEBP1Q8IUX7 1158 aa29.38■■■□□ 2.29
CIRBP-205ENST00000585913 NPC1L1Q9UHC9 1359 aa29.38■■■□□ 2.29
CIRBP-205ENST00000585913 AMOTQ4VCS5 1084 aa29.37■■■□□ 2.29
CIRBP-205ENST00000585913 SULT6B1Q6IMI4 303 aa29.37■■■□□ 2.29
CIRBP-205ENST00000585913 PNPLA7Q6ZV29 1317 aa29.37■■■□□ 2.29
CIRBP-205ENST00000585913 CNGB1Q14028 1251 aaPredicted RBP29.36■■■□□ 2.29
CIRBP-205ENST00000585913 HSP90AB1P08238 724 aaKnown RBP29.35■■■□□ 2.29
CIRBP-205ENST00000585913 ZNF530Q6P9A1 599 aaPredicted RBP29.35■■■□□ 2.29
CIRBP-205ENST00000585913 SLC16A10Q8TF71 515 aa29.35■■■□□ 2.29
CIRBP-205ENST00000585913 TAF1LQ8IZX4 1826 aa29.35■■■□□ 2.29
CIRBP-205ENST00000585913 YY1P25490 414 aa29.34■■■□□ 2.29
CIRBP-205ENST00000585913 KDRP35968 1356 aa29.34■■■□□ 2.29
CIRBP-205ENST00000585913 SGIP1Q9BQI5 828 aa29.33■■■□□ 2.29
CIRBP-205ENST00000585913 DCAF5Q96JK2 942 aa29.31■■■□□ 2.28
CIRBP-205ENST00000585913 C1orf141Q5JVX7 400 aa29.3■■■□□ 2.28
CIRBP-205ENST00000585913 C4BP0C0L5 1744 aa29.29■■■□□ 2.28
CIRBP-205ENST00000585913 ERVV-2B6SEH9 535 aa29.29■■■□□ 2.28
CIRBP-205ENST00000585913 MSH5O43196 834 aa29.28■■■□□ 2.28
CIRBP-205ENST00000585913 DIAPH1O60610 1272 aaKnown RBP29.28■■■□□ 2.28
CIRBP-205ENST00000585913 ARXQ96QS3 562 aa29.28■■■□□ 2.28
CIRBP-205ENST00000585913 ASAP1Q9ULH1 1129 aa29.28■■■□□ 2.28
CIRBP-205ENST00000585913 LOC102724428A0A0B4J2F2 783 aa29.27■■■□□ 2.28
CIRBP-205ENST00000585913 DCAF8L1A6NGE4 600 aa29.27■■■□□ 2.28
CIRBP-205ENST00000585913 SIK1P57059 783 aa29.27■■■□□ 2.28
CIRBP-205ENST00000585913 KDM6AO15550 1401 aaPredicted RBP29.27■■■□□ 2.28
CIRBP-205ENST00000585913 POLD1P28340 1107 aa29.26■■■□□ 2.27
CIRBP-205ENST00000585913 FHDC1Q9C0D6 1143 aaPredicted RBP29.26■■■□□ 2.27
CIRBP-205ENST00000585913 COL24A1Q17RW2 1714 aa29.25■■■□□ 2.27
CIRBP-205ENST00000585913 HMOX1P09601 288 aa29.25■■■□□ 2.27
CIRBP-205ENST00000585913 COL23A1Q86Y22 540 aaPredicted RBP29.25■■■□□ 2.27
CIRBP-205ENST00000585913 AK7Q96M32 723 aa29.25■■■□□ 2.27
CIRBP-205ENST00000585913 ATG3Q9NT62 314 aa29.25■■■□□ 2.27
CIRBP-205ENST00000585913 CABP4P57796 275 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms