RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 SRPK2P78362 688 aaKnown RBP13.22□□□□□ -0.29
SDF2-203ENST00000585749 ARHGEF25Q86VW2 580 aa13.22□□□□□ -0.29
SDF2-203ENST00000585749 NLGN2Q8NFZ4 835 aa13.22□□□□□ -0.29
SDF2-203ENST00000585749 ACSBG1Q96GR2 724 aa13.22□□□□□ -0.29
SDF2-203ENST00000585749 LRRC4BQ9NT99 713 aa13.22□□□□□ -0.29
SDF2-203ENST00000585749 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
SDF2-203ENST00000585749 CCDC7Q96M83 1385 aa13.21□□□□□ -0.29
SDF2-203ENST00000585749 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.29
SDF2-203ENST00000585749 CABP2Q9NPB3 220 aa13.21□□□□□ -0.29
SDF2-203ENST00000585749 ATP10DQ9P241 1426 aa13.21□□□□□ -0.3
SDF2-203ENST00000585749 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
SDF2-203ENST00000585749 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
SDF2-203ENST00000585749 YBX3P16989 372 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■□□□□ 8.7
SDF2-203ENST00000585749 POLD1P28340 1107 aa13.2□□□□□ -0.3
SDF2-203ENST00000585749 NFAT5O94916 1531 aa13.19□□□□□ -0.3
SDF2-203ENST00000585749 PNPLA7Q6ZV29 1317 aa13.19□□□□□ -0.3
SDF2-203ENST00000585749 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
SDF2-203ENST00000585749 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
SDF2-203ENST00000585749 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
SDF2-203ENST00000585749 GRIN3BO60391 1043 aa13.18□□□□□ -0.3
SDF2-203ENST00000585749 HSPA6P17066 643 aa13.18□□□□□ -0.3
SDF2-203ENST00000585749 KCNH5Q8NCM2 988 aa13.17□□□□□ -0.3
SDF2-203ENST00000585749 SOX12O15370 315 aa13.16□□□□□ -0.3
SDF2-203ENST00000585749 ADCY9O60503 1353 aa13.16□□□□□ -0.3
SDF2-203ENST00000585749 KAT6BQ8WYB5 2073 aa13.16□□□□□ -0.3
SDF2-203ENST00000585749 CLSPNQ9HAW4 1339 aa13.15□□□□□ -0.3
SDF2-203ENST00000585749 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
SDF2-203ENST00000585749 GPBP1L1Q9HC44 474 aaPredicted RBP13.15□□□□□ -0.3
SDF2-203ENST00000585749 TTC21BQ7Z4L5 1316 aa13.14□□□□□ -0.31
SDF2-203ENST00000585749 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
SDF2-203ENST00000585749 ERBB3P21860 1342 aa13.13□□□□□ -0.31
SDF2-203ENST00000585749 LY75O60449 1722 aa13.13□□□□□ -0.31
SDF2-203ENST00000585749 SBNO2Q9Y2G9 1366 aa13.13□□□□□ -0.31
SDF2-203ENST00000585749 IL2RBP14784 551 aa13.13□□□□□ -0.31
SDF2-203ENST00000585749 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
SDF2-203ENST00000585749 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
SDF2-203ENST00000585749 KCNQ4P56696 695 aa13.11□□□□□ -0.31
SDF2-203ENST00000585749 LTN1O94822 1766 aa13.11□□□□□ -0.31
SDF2-203ENST00000585749 USP54Q70EL1 1684 aa13.11□□□□□ -0.31
SDF2-203ENST00000585749 TTC21AQ8NDW8 1320 aa13.11□□□□□ -0.31
SDF2-203ENST00000585749 ZNF526Q8TF50 670 aaPredicted RBP13.1□□□□□ -0.31
SDF2-203ENST00000585749 CARD11Q9BXL7 1154 aa13.1□□□□□ -0.31
SDF2-203ENST00000585749 NLRP2Q9NX02 1062 aa13.1□□□□□ -0.31
SDF2-203ENST00000585749 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
SDF2-203ENST00000585749 EVC2Q86UK5 1308 aa13.1□□□□□ -0.31
SDF2-203ENST00000585749 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
SDF2-203ENST00000585749 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
SDF2-203ENST00000585749 TIMELESSQ9UNS1 1208 aa13.08□□□□□ -0.32
SDF2-203ENST00000585749 NSD2O96028 1365 aa13.07□□□□□ -0.32
SDF2-203ENST00000585749 COL23A1Q86Y22 540 aaPredicted RBP13.07□□□□□ -0.32
SDF2-203ENST00000585749 KIF3CO14782 793 aa13.06□□□□□ -0.32
SDF2-203ENST00000585749 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
SDF2-203ENST00000585749 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
SDF2-203ENST00000585749 CD2APQ9Y5K6 639 aa13.06□□□□□ -0.32
SDF2-203ENST00000585749 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
SDF2-203ENST00000585749 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
SDF2-203ENST00000585749 ANKRD36BQ8N2N9 1353 aa13.06□□□□□ -0.32
SDF2-203ENST00000585749 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
SDF2-203ENST00000585749 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
SDF2-203ENST00000585749 PRIM1P49642 420 aaKnown RBP13.04□□□□□ -0.32
SDF2-203ENST00000585749 DNAJC5GQ8N7S2 189 aa13.04□□□□□ -0.32
SDF2-203ENST00000585749 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
SDF2-203ENST00000585749 CCNL1Q9UK58 526 aaPredicted RBP13.04□□□□□ -0.32
SDF2-203ENST00000585749 C5P01031 1676 aa13.04□□□□□ -0.32
SDF2-203ENST00000585749 APLP1P51693 650 aa13.03□□□□□ -0.32
SDF2-203ENST00000585749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.01□□□□□ -0.33
SDF2-203ENST00000585749 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
SDF2-203ENST00000585749 TAF1LQ8IZX4 1826 aa13□□□□□ -0.33
SDF2-203ENST00000585749 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
SDF2-203ENST00000585749 USP47Q96K76 1375 aa13□□□□□ -0.33
SDF2-203ENST00000585749 NME9Q86XW9 330 aa13□□□□□ -0.33
SDF2-203ENST00000585749 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
SDF2-203ENST00000585749 WDR90Q96KV7 1748 aa12.99□□□□□ -0.33
SDF2-203ENST00000585749 IGSF1Q8N6C5 1336 aa12.99□□□□□ -0.33
SDF2-203ENST00000585749 SLC24A1O60721 1099 aa12.99□□□□□ -0.33
SDF2-203ENST00000585749 PUS7Q96PZ0 661 aaKnown RBP12.99□□□□□ -0.33
SDF2-203ENST00000585749 TESK2Q96S53 571 aa12.99□□□□□ -0.33
SDF2-203ENST00000585749 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
SDF2-203ENST00000585749 ST20-MTHFSA0A0A6YYL1 179 aa12.98□□□□□ -0.33
SDF2-203ENST00000585749 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
SDF2-203ENST00000585749 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
SDF2-203ENST00000585749 MEGF6O75095 1541 aa12.98□□□□□ -0.33
SDF2-203ENST00000585749 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
SDF2-203ENST00000585749 PCNTO95613 3336 aa12.97□□□□□ -0.33
SDF2-203ENST00000585749 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
SDF2-203ENST00000585749 TOMM70O94826 608 aa12.96□□□□□ -0.33
SDF2-203ENST00000585749 FLAD1Q8NFF5 587 aa12.96□□□□□ -0.33
SDF2-203ENST00000585749 IP6K1Q92551 441 aa12.96□□□□□ -0.33
SDF2-203ENST00000585749 C4BP0C0L5 1744 aa12.96□□□□□ -0.34
SDF2-203ENST00000585749 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
SDF2-203ENST00000585749 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
SDF2-203ENST00000585749 LTV1Q96GA3 475 aaPredicted RBP12.95□□□□□ -0.34
SDF2-203ENST00000585749 AMIGO3Q86WK7 504 aa12.94□□□□□ -0.34
SDF2-203ENST00000585749 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
SDF2-203ENST00000585749 JMYQ8N9B5 988 aa12.93□□□□□ -0.34
SDF2-203ENST00000585749 EDC4Q6P2E9 1401 aaKnown RBP12.93□□□□□ -0.34
SDF2-203ENST00000585749 A0A1W2PP64 1363 aa12.93□□□□□ -0.34
SDF2-203ENST00000585749 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
SDF2-203ENST00000585749 TMF1P82094 1093 aa12.92□□□□□ -0.34
SDF2-203ENST00000585749 HDGFL2Q7Z4V5 671 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms