RNA–Protein interactions for RNA: ENST00000585027.1

TMEM199-209, Transcript of transmembrane protein 199, humanhuman

TSL 2

Gene TMEM199, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-209ENST00000585027 ZCRB1Q8TBF4 217 aaKnown RBP13.96□□□□□ -0.17
TMEM199-209ENST00000585027 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.17
TMEM199-209ENST00000585027 MAP2P11137 1827 aaKnown RBP13.96□□□□□ -0.17
TMEM199-209ENST00000585027 NSD2O96028 1365 aa13.96□□□□□ -0.18
TMEM199-209ENST00000585027 EMILIN1Q9Y6C2 1016 aa13.95□□□□□ -0.18
TMEM199-209ENST00000585027 LY75O60449 1722 aa13.95□□□□□ -0.18
TMEM199-209ENST00000585027 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
TMEM199-209ENST00000585027 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
TMEM199-209ENST00000585027 USHBP1Q8N6Y0 703 aa13.94□□□□□ -0.18
TMEM199-209ENST00000585027 PDGFDQ9GZP0 370 aaPredicted RBP13.94□□□□□ -0.18
TMEM199-209ENST00000585027 SPON1Q9HCB6 807 aa13.94□□□□□ -0.18
TMEM199-209ENST00000585027 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
TMEM199-209ENST00000585027 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
TMEM199-209ENST00000585027 RAPGEF4Q8WZA2 1011 aa13.92□□□□□ -0.18
TMEM199-209ENST00000585027 LRRC4BQ9NT99 713 aa13.92□□□□□ -0.18
TMEM199-209ENST00000585027 STK32BQ9NY57 414 aa13.92□□□□□ -0.18
TMEM199-209ENST00000585027 POLKQ9UBT6 870 aa13.92□□□□□ -0.18
TMEM199-209ENST00000585027 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
TMEM199-209ENST00000585027 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
TMEM199-209ENST00000585027 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
TMEM199-209ENST00000585027 TATP17735 454 aaPredicted RBP13.9□□□□□ -0.18
TMEM199-209ENST00000585027 SLC27A3Q5K4L6 730 aa13.9□□□□□ -0.18
TMEM199-209ENST00000585027 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
TMEM199-209ENST00000585027 PANK3Q9H999 370 aa13.9□□□□□ -0.18
TMEM199-209ENST00000585027 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.19
TMEM199-209ENST00000585027 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.19
TMEM199-209ENST00000585027 PTGER2P43116 358 aa13.89□□□□□ -0.19
TMEM199-209ENST00000585027 ZNF827Q17R98 1081 aa13.89□□□□□ -0.19
TMEM199-209ENST00000585027 TUBGCP6Q96RT7 1819 aa13.88□□□□□ -0.19
TMEM199-209ENST00000585027 COL24A1Q17RW2 1714 aa13.88□□□□□ -0.19
TMEM199-209ENST00000585027 CYP27B1O15528 508 aa13.88□□□□□ -0.19
TMEM199-209ENST00000585027 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
TMEM199-209ENST00000585027 EYA1Q99502 592 aa13.88□□□□□ -0.19
TMEM199-209ENST00000585027 SGIP1Q9BQI5 828 aa13.88□□□□□ -0.19
TMEM199-209ENST00000585027 PLEKHG2Q9H7P9 1386 aa13.87□□□□□ -0.19
TMEM199-209ENST00000585027 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
TMEM199-209ENST00000585027 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
TMEM199-209ENST00000585027 SYTL4Q96C24 671 aaPredicted RBP13.87□□□□□ -0.19
TMEM199-209ENST00000585027 ITGB4P16144 1822 aa13.87□□□□□ -0.19
TMEM199-209ENST00000585027 NKX1-1Q15270 411 aaPredicted RBP13.86□□□□□ -0.19
TMEM199-209ENST00000585027 MTFR1LQ9H019 292 aa13.86□□□□□ -0.19
TMEM199-209ENST00000585027 EIF4A2Q14240 407 aaKnown RBP13.85□□□□□ -0.19
TMEM199-209ENST00000585027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.19
TMEM199-209ENST00000585027 PPP1R1BQ9UD71 204 aaPredicted RBP13.85□□□□□ -0.19
TMEM199-209ENST00000585027 KIF7Q2M1P5 1343 aa13.85□□□□□ -0.19
TMEM199-209ENST00000585027 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
TMEM199-209ENST00000585027 C5P01031 1676 aa13.84□□□□□ -0.19
TMEM199-209ENST00000585027 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
TMEM199-209ENST00000585027 TAF1LQ8IZX4 1826 aa13.83□□□□□ -0.2
TMEM199-209ENST00000585027 TNNT2P45379 298 aaPredicted RBP13.83□□□□□ -0.2
TMEM199-209ENST00000585027 KCNQ4P56696 695 aa13.83□□□□□ -0.2
TMEM199-209ENST00000585027 PNPLA7Q6ZV29 1317 aa13.83□□□□□ -0.2
TMEM199-209ENST00000585027 AMER1Q5JTC6 1135 aaPredicted RBP13.82□□□□□ -0.2
TMEM199-209ENST00000585027 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
TMEM199-209ENST00000585027 SPG7Q9UQ90 795 aa13.82□□□□□ -0.2
TMEM199-209ENST00000585027 SLC16A10Q8TF71 515 aa13.81□□□□□ -0.2
TMEM199-209ENST00000585027 PALLDQ8WX93 1383 aa13.81□□□□□ -0.2
TMEM199-209ENST00000585027 PHKG2P15735 406 aa13.8□□□□□ -0.2
TMEM199-209ENST00000585027 MPRIPQ6WCQ1 1025 aa13.8□□□□□ -0.2
TMEM199-209ENST00000585027 MORC1Q86VD1 984 aa13.8□□□□□ -0.2
TMEM199-209ENST00000585027 KNSTRNQ9Y448 316 aa13.8□□□□□ -0.2
TMEM199-209ENST00000585027 MAP3K5Q99683 1374 aa13.8□□□□□ -0.2
TMEM199-209ENST00000585027 PER1O15534 1290 aaPredicted RBP13.79□□□□□ -0.2
TMEM199-209ENST00000585027 PIGBQ92521 554 aa13.79□□□□□ -0.2
TMEM199-209ENST00000585027 IFNL2Q8IZJ0 200 aa13.78□□□□□ -0.2
TMEM199-209ENST00000585027 SYT17Q9BSW7 474 aa13.78□□□□□ -0.2
TMEM199-209ENST00000585027 FHDC1Q9C0D6 1143 aaPredicted RBP13.78□□□□□ -0.2
TMEM199-209ENST00000585027 TFCP2L1Q9NZI6 479 aa13.78□□□□□ -0.2
TMEM199-209ENST00000585027 C4BP0C0L5 1744 aa13.78□□□□□ -0.2
TMEM199-209ENST00000585027 KDRP35968 1356 aa13.77□□□□□ -0.21
TMEM199-209ENST00000585027 SMARCC1Q92922 1105 aaPredicted RBP13.77□□□□□ -0.21
TMEM199-209ENST00000585027 ARXQ96QS3 562 aa13.77□□□□□ -0.21
TMEM199-209ENST00000585027 HMGB2P26583 209 aaKnown RBP13.76□□□□□ -0.21
TMEM199-209ENST00000585027 COL23A1Q86Y22 540 aaPredicted RBP13.76□□□□□ -0.21
TMEM199-209ENST00000585027 UBR3Q6ZT12 1888 aa13.76□□□□□ -0.21
TMEM199-209ENST00000585027 ZNF831Q5JPB2 1677 aa13.75□□□□□ -0.21
TMEM199-209ENST00000585027 NPC1L1Q9UHC9 1359 aa13.75□□□□□ -0.21
TMEM199-209ENST00000585027 IL13P35225 146 aa13.75□□□□□ -0.21
TMEM199-209ENST00000585027 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
TMEM199-209ENST00000585027 KDM6AO15550 1401 aaPredicted RBP13.74□□□□□ -0.21
TMEM199-209ENST00000585027 TMOD3Q9NYL9 352 aa13.74□□□□□ -0.21
TMEM199-209ENST00000585027 LOC102724428A0A0B4J2F2 783 aa13.73□□□□□ -0.21
TMEM199-209ENST00000585027 SIK1P57059 783 aa13.73□□□□□ -0.21
TMEM199-209ENST00000585027 AMOTQ4VCS5 1084 aa13.73□□□□□ -0.21
TMEM199-209ENST00000585027 PLEKHO1Q53GL0 409 aaPredicted RBP13.73□□□□□ -0.21
TMEM199-209ENST00000585027 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
TMEM199-209ENST00000585027 ASAP1Q9ULH1 1129 aa13.73□□□□□ -0.21
TMEM199-209ENST00000585027 ERVV-2B6SEH9 535 aa13.72□□□□□ -0.21
TMEM199-209ENST00000585027 HSP90AB1P08238 724 aaKnown RBP13.72□□□□□ -0.21
TMEM199-209ENST00000585027 POLD1P28340 1107 aa13.72□□□□□ -0.21
TMEM199-209ENST00000585027 MTHFSP49914 203 aa13.72□□□□□ -0.21
TMEM199-209ENST00000585027 AMIGO3Q86WK7 504 aa13.72□□□□□ -0.21
TMEM199-209ENST00000585027 DCAF5Q96JK2 942 aa13.72□□□□□ -0.21
TMEM199-209ENST00000585027 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
TMEM199-209ENST00000585027 ITPK1Q13572 414 aa13.71□□□□□ -0.21
TMEM199-209ENST00000585027 SULT6B1Q6IMI4 303 aa13.71□□□□□ -0.21
TMEM199-209ENST00000585027 LINC00116Q8NCU8 138 aa13.71□□□□□ -0.21
TMEM199-209ENST00000585027 FLAD1Q8NFF5 587 aa13.71□□□□□ -0.21
TMEM199-209ENST00000585027 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
TMEM199-209ENST00000585027 COL5A3P25940 1745 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms