RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 MTHFSDQ2M296 383 aaKnown RBP19.27■□□□□ 0.68
CDK5RAP3-236ENST00000584991 CAMTA1Q9Y6Y1 1673 aa19.27■□□□□ 0.68
CDK5RAP3-236ENST00000584991 KDM2BQ8NHM5 1336 aa19.27■□□□□ 0.68
CDK5RAP3-236ENST00000584991 PLIN1O60240 522 aa19.26■□□□□ 0.67
CDK5RAP3-236ENST00000584991 CSB-PGBD3P0DP91 1061 aa19.26■□□□□ 0.67
CDK5RAP3-236ENST00000584991 LMO7Q8WWI1 1683 aa19.26■□□□□ 0.67
CDK5RAP3-236ENST00000584991 LMOD3Q0VAK6 560 aa19.25■□□□□ 0.67
CDK5RAP3-236ENST00000584991 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
CDK5RAP3-236ENST00000584991 NCAPD2Q15021 1401 aa19.25■□□□□ 0.67
CDK5RAP3-236ENST00000584991 FAM208AQ9UK61 1670 aaKnown RBP19.24■□□□□ 0.67
CDK5RAP3-236ENST00000584991 FAM83GA6ND36 823 aa19.24■□□□□ 0.67
CDK5RAP3-236ENST00000584991 GAS2L2Q8NHY3 880 aa19.24■□□□□ 0.67
CDK5RAP3-236ENST00000584991 THUMPD2Q9BTF0 503 aaKnown RBP19.24■□□□□ 0.67
CDK5RAP3-236ENST00000584991 IL16Q14005 1332 aa19.23■□□□□ 0.67
CDK5RAP3-236ENST00000584991 DCTN1Q14203 1278 aa19.22■□□□□ 0.67
CDK5RAP3-236ENST00000584991 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
CDK5RAP3-236ENST00000584991 DDRGK1Q96HY6 314 aa19.22■□□□□ 0.67
CDK5RAP3-236ENST00000584991 AAMPQ13685 434 aa19.21■□□□□ 0.67
CDK5RAP3-236ENST00000584991 COL5A2P05997 1499 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP3-236ENST00000584991 CALD1Q05682 793 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-236ENST00000584991 TSR2Q969E8 191 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-236ENST00000584991 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
CDK5RAP3-236ENST00000584991 PDE3AQ14432 1141 aa19.19■□□□□ 0.66
CDK5RAP3-236ENST00000584991 MCM10Q7L590 875 aa19.19■□□□□ 0.66
CDK5RAP3-236ENST00000584991 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-236ENST00000584991 VIRMAQ69YN4 1812 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-236ENST00000584991 USP35Q9P2H5 1018 aa19.18■□□□□ 0.66
CDK5RAP3-236ENST00000584991 COL14A1Q05707 1796 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-236ENST00000584991 EVA1CP58658 441 aa19.18■□□□□ 0.66
CDK5RAP3-236ENST00000584991 PLEKHO1Q53GL0 409 aaPredicted RBP19.18■□□□□ 0.66
CDK5RAP3-236ENST00000584991 C20orf194Q5TEA3 1177 aa19.18■□□□□ 0.66
CDK5RAP3-236ENST00000584991 TOM1L2Q6ZVM7 507 aa19.18■□□□□ 0.66
CDK5RAP3-236ENST00000584991 RTF1Q92541 710 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-236ENST00000584991 STRN4Q9NRL3 753 aa19.18■□□□□ 0.66
CDK5RAP3-236ENST00000584991 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
CDK5RAP3-236ENST00000584991 RAPGEF4Q8WZA2 1011 aa19.17■□□□□ 0.66
CDK5RAP3-236ENST00000584991 NUTM2BA6NNL0 878 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 NUTM2EB1AL46 878 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 GNAI1P63096 354 aa19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 AMOTQ4VCS5 1084 aa19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 NUTM2AQ8IVF1 878 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 BTG4Q9NY30 223 aa19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 MAP3K5Q99683 1374 aa19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 HTATSF1O43719 755 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 IFT57Q9NWB7 429 aa19.16■□□□□ 0.66
CDK5RAP3-236ENST00000584991 LARP1Q6PKG0 1096 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP3-236ENST00000584991 ZNF853P0CG23 659 aa19.14■□□□□ 0.65
CDK5RAP3-236ENST00000584991 TATP17735 454 aaPredicted RBP19.14■□□□□ 0.65
CDK5RAP3-236ENST00000584991 EXOSC9Q06265 439 aaKnown RBP19.14■□□□□ 0.65
CDK5RAP3-236ENST00000584991 RTL5Q5HYW3 569 aaPredicted RBP19.14■□□□□ 0.65
CDK5RAP3-236ENST00000584991 ZNF530Q6P9A1 599 aaPredicted RBP19.14■□□□□ 0.65
CDK5RAP3-236ENST00000584991 CFAP44Q96MT7 982 aa19.14■□□□□ 0.65
CDK5RAP3-236ENST00000584991 MEGF6O75095 1541 aa19.14■□□□□ 0.65
CDK5RAP3-236ENST00000584991 JCADQ9P266 1359 aa19.12■□□□□ 0.65
CDK5RAP3-236ENST00000584991 CRB1P82279 1406 aa19.12■□□□□ 0.65
CDK5RAP3-236ENST00000584991 MBIPQ9NS73 344 aa19.12■□□□□ 0.65
CDK5RAP3-236ENST00000584991 FAM161AQ3B820 660 aa19.11■□□□□ 0.65
CDK5RAP3-236ENST00000584991 AKAP4Q5JQC9 854 aa19.11■□□□□ 0.65
CDK5RAP3-236ENST00000584991 IL17REQ8NFR9 667 aa19.11■□□□□ 0.65
CDK5RAP3-236ENST00000584991 CARD10Q9BWT7 1032 aa19.11■□□□□ 0.65
CDK5RAP3-236ENST00000584991 PLCH1Q4KWH8 1693 aa19.11■□□□□ 0.65
CDK5RAP3-236ENST00000584991 DEKP35659 375 aaKnown RBP19.1■□□□□ 0.65
CDK5RAP3-236ENST00000584991 C1orf141Q5JVX7 400 aa19.1■□□□□ 0.65
CDK5RAP3-236ENST00000584991 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
CDK5RAP3-236ENST00000584991 LRRC37A3O60309 1634 aa19.1■□□□□ 0.65
CDK5RAP3-236ENST00000584991 CHL1O00533 1208 aa19.09■□□□□ 0.65
CDK5RAP3-236ENST00000584991 SPG7Q9UQ90 795 aa19.09■□□□□ 0.65
CDK5RAP3-236ENST00000584991 PARP4Q9UKK3 1724 aaKnown RBP19.08■□□□□ 0.65
CDK5RAP3-236ENST00000584991 BCAR3O75815 825 aa19.08■□□□□ 0.65
CDK5RAP3-236ENST00000584991 HSPA1LP34931 641 aa19.08■□□□□ 0.65
CDK5RAP3-236ENST00000584991 NPM2Q86SE8 214 aaKnown RBP19.08■□□□□ 0.65
CDK5RAP3-236ENST00000584991 LGR6Q9HBX8 967 aa19.08■□□□□ 0.65
CDK5RAP3-236ENST00000584991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.08■□□□□ 0.658e-10■□□□□ 11
CDK5RAP3-236ENST00000584991 PKD1L3Q7Z443 1732 aa19.08■□□□□ 0.64
CDK5RAP3-236ENST00000584991 CT47B1P0C2W7 299 aaPredicted RBP19.07■□□□□ 0.64
CDK5RAP3-236ENST00000584991 MPRIPQ6WCQ1 1025 aa19.07■□□□□ 0.64
CDK5RAP3-236ENST00000584991 MIS18AQ9NYP9 233 aa19.07■□□□□ 0.64
CDK5RAP3-236ENST00000584991 PLEKHG2Q9H7P9 1386 aa19.07■□□□□ 0.64
CDK5RAP3-236ENST00000584991 RARSP54136 660 aaKnown RBP19.07■□□□□ 0.64
CDK5RAP3-236ENST00000584991 OVOS2A0A0G2JMS6 1433 aa19.06■□□□□ 0.64
CDK5RAP3-236ENST00000584991 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
CDK5RAP3-236ENST00000584991 NRAPQ86VF7 1730 aa19.05■□□□□ 0.64
CDK5RAP3-236ENST00000584991 IL2RBP14784 551 aa19.05■□□□□ 0.64
CDK5RAP3-236ENST00000584991 NBR1Q14596 966 aa19.05■□□□□ 0.64
CDK5RAP3-236ENST00000584991 RNMTO43148 476 aaKnown RBP19.05■□□□□ 0.64
CDK5RAP3-236ENST00000584991 TSPYL4Q9UJ04 414 aa19.05■□□□□ 0.64
CDK5RAP3-236ENST00000584991 PHKG2P15735 406 aa19.04■□□□□ 0.64
CDK5RAP3-236ENST00000584991 TSPYL6Q8N831 410 aa19.04■□□□□ 0.64
CDK5RAP3-236ENST00000584991 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
CDK5RAP3-236ENST00000584991 ELL2O00472 640 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP3-236ENST00000584991 TAF7Q15545 349 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP3-236ENST00000584991 IFNL2Q8IZJ0 200 aa19.03■□□□□ 0.64
CDK5RAP3-236ENST00000584991 C8orf58Q8NAV2 365 aa19.03■□□□□ 0.64
CDK5RAP3-236ENST00000584991 BCL2L13Q9BXK5 485 aa19.03■□□□□ 0.64
CDK5RAP3-236ENST00000584991 SPATA31A6Q5VVP1 1343 aa19.03■□□□□ 0.64
CDK5RAP3-236ENST00000584991 ZCRB1Q8TBF4 217 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP3-236ENST00000584991 CYP27B1O15528 508 aa19.02■□□□□ 0.64
CDK5RAP3-236ENST00000584991 C8orf34Q49A92 452 aa19.02■□□□□ 0.64
CDK5RAP3-236ENST00000584991 SLIT2O94813 1529 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms