RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 USHBP1Q8N6Y0 703 aa24.59■■□□□ 1.53
ERBB2-221ENST00000584888 MEGF6O75095 1541 aa24.59■■□□□ 1.53
ERBB2-221ENST00000584888 RGPD2P0DJD1 1756 aa24.59■■□□□ 1.53
ERBB2-221ENST00000584888 KIF7Q2M1P5 1343 aa24.59■■□□□ 1.53
ERBB2-221ENST00000584888 KIF24Q5T7B8 1368 aa24.58■■□□□ 1.53
ERBB2-221ENST00000584888 PRIM1P49642 420 aaKnown RBP24.58■■□□□ 1.53
ERBB2-221ENST00000584888 LRRC4BQ9NT99 713 aa24.58■■□□□ 1.53
ERBB2-221ENST00000584888 ATF5Q9Y2D1 282 aaPredicted RBP24.58■■□□□ 1.53
ERBB2-221ENST00000584888 ANKRD26Q9UPS8 1709 aa24.58■■□□□ 1.52
ERBB2-221ENST00000584888 INSRP06213 1382 aa24.57■■□□□ 1.52
ERBB2-221ENST00000584888 SMG6Q86US8 1419 aaKnown RBP24.57■■□□□ 1.52
ERBB2-221ENST00000584888 MAP2P11137 1827 aaKnown RBP24.56■■□□□ 1.52
ERBB2-221ENST00000584888 PTGER2P43116 358 aa24.56■■□□□ 1.52
ERBB2-221ENST00000584888 SYTL4Q96C24 671 aaPredicted RBP24.56■■□□□ 1.52
ERBB2-221ENST00000584888 FLT4P35916 1363 aa24.55■■□□□ 1.52
ERBB2-221ENST00000584888 RAPGEF4Q8WZA2 1011 aa24.55■■□□□ 1.52
ERBB2-221ENST00000584888 SLC27A3Q5K4L6 730 aa24.53■■□□□ 1.52
ERBB2-221ENST00000584888 EMILIN1Q9Y6C2 1016 aa24.53■■□□□ 1.52
ERBB2-221ENST00000584888 TATP17735 454 aaPredicted RBP24.52■■□□□ 1.52
ERBB2-221ENST00000584888 ZNF827Q17R98 1081 aa24.52■■□□□ 1.52
ERBB2-221ENST00000584888 MTFR1LQ9H019 292 aa24.52■■□□□ 1.52
ERBB2-221ENST00000584888 PAPPAQ13219 1627 aa24.52■■□□□ 1.52
ERBB2-221ENST00000584888 SHANK3Q9BYB0 1731 aa24.5■■□□□ 1.51
ERBB2-221ENST00000584888 AKT1S1Q96B36 256 aa24.5■■□□□ 1.51
ERBB2-221ENST00000584888 POLKQ9UBT6 870 aa24.5■■□□□ 1.51
ERBB2-221ENST00000584888 NSD2O96028 1365 aa24.5■■□□□ 1.51
ERBB2-221ENST00000584888 PPM1GO15355 546 aaPredicted RBP24.49■■□□□ 1.51
ERBB2-221ENST00000584888 KCNQ4P56696 695 aa24.48■■□□□ 1.51
ERBB2-221ENST00000584888 SGIP1Q9BQI5 828 aa24.48■■□□□ 1.51
ERBB2-221ENST00000584888 DOT1LQ8TEK3 1739 aa24.47■■□□□ 1.51
ERBB2-221ENST00000584888 WASHC2AQ641Q2 1341 aa24.47■■□□□ 1.51
ERBB2-221ENST00000584888 DCAF8L1A6NGE4 600 aa24.47■■□□□ 1.51
ERBB2-221ENST00000584888 PER1O15534 1290 aaPredicted RBP24.46■■□□□ 1.51
ERBB2-221ENST00000584888 PCDH11XQ9BZA7 1347 aa24.45■■□□□ 1.5
ERBB2-221ENST00000584888 PCDH11YQ9BZA8 1340 aa24.45■■□□□ 1.5
ERBB2-221ENST00000584888 AMER1Q5JTC6 1135 aaPredicted RBP24.45■■□□□ 1.5
ERBB2-221ENST00000584888 KNSTRNQ9Y448 316 aa24.45■■□□□ 1.5
ERBB2-221ENST00000584888 FHDC1Q9C0D6 1143 aaPredicted RBP24.43■■□□□ 1.5
ERBB2-221ENST00000584888 NCAPD2Q15021 1401 aa24.43■■□□□ 1.5
ERBB2-221ENST00000584888 CYP27B1O15528 508 aa24.42■■□□□ 1.5
ERBB2-221ENST00000584888 SYT17Q9BSW7 474 aa24.42■■□□□ 1.5
ERBB2-221ENST00000584888 TFCP2L1Q9NZI6 479 aa24.42■■□□□ 1.5
ERBB2-221ENST00000584888 CCNL1Q9UK58 526 aaPredicted RBP24.42■■□□□ 1.5
ERBB2-221ENST00000584888 PNPLA7Q6ZV29 1317 aa24.41■■□□□ 1.5
ERBB2-221ENST00000584888 TNNT2P45379 298 aaPredicted RBP24.41■■□□□ 1.5
ERBB2-221ENST00000584888 ARXQ96QS3 562 aa24.41■■□□□ 1.5
ERBB2-221ENST00000584888 YY1P25490 414 aa24.4■■□□□ 1.5
ERBB2-221ENST00000584888 SLC16A10Q8TF71 515 aa24.4■■□□□ 1.5
ERBB2-221ENST00000584888 EYA1Q99502 592 aa24.4■■□□□ 1.5
ERBB2-221ENST00000584888 LY75O60449 1722 aa24.39■■□□□ 1.5
ERBB2-221ENST00000584888 MORC1Q86VD1 984 aa24.39■■□□□ 1.49
ERBB2-221ENST00000584888 MPRIPQ6WCQ1 1025 aa24.37■■□□□ 1.49
ERBB2-221ENST00000584888 SPG7Q9UQ90 795 aa24.36■■□□□ 1.49
ERBB2-221ENST00000584888 EIF4A2Q14240 407 aaKnown RBP24.34■■□□□ 1.49
ERBB2-221ENST00000584888 NKX1-1Q15270 411 aaPredicted RBP24.34■■□□□ 1.49
ERBB2-221ENST00000584888 QSER1Q2KHR3 1735 aa24.34■■□□□ 1.49
ERBB2-221ENST00000584888 NPC1L1Q9UHC9 1359 aa24.33■■□□□ 1.49
ERBB2-221ENST00000584888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.33■■□□□ 1.49
ERBB2-221ENST00000584888 PALLDQ8WX93 1383 aa24.32■■□□□ 1.48
ERBB2-221ENST00000584888 POLD1P28340 1107 aa24.32■■□□□ 1.48
ERBB2-221ENST00000584888 PKD1L3Q7Z443 1732 aa24.32■■□□□ 1.48
ERBB2-221ENST00000584888 COL23A1Q86Y22 540 aaPredicted RBP24.31■■□□□ 1.48
ERBB2-221ENST00000584888 PIGBQ92521 554 aa24.31■■□□□ 1.48
ERBB2-221ENST00000584888 MAP3K5Q99683 1374 aa24.3■■□□□ 1.48
ERBB2-221ENST00000584888 SMARCC1Q92922 1105 aaPredicted RBP24.3■■□□□ 1.48
ERBB2-221ENST00000584888 TUBGCP6Q96RT7 1819 aa24.3■■□□□ 1.48
ERBB2-221ENST00000584888 MSH5O43196 834 aa24.29■■□□□ 1.48
ERBB2-221ENST00000584888 HMGB2P26583 209 aaKnown RBP24.29■■□□□ 1.48
ERBB2-221ENST00000584888 TOGARAM1Q9Y4F4 1720 aa24.27■■□□□ 1.48
ERBB2-221ENST00000584888 PHKG2P15735 406 aa24.27■■□□□ 1.48
ERBB2-221ENST00000584888 IFNL2Q8IZJ0 200 aa24.27■■□□□ 1.48
ERBB2-221ENST00000584888 IGSF1Q8N6C5 1336 aa24.27■■□□□ 1.48
ERBB2-221ENST00000584888 ITGB4P16144 1822 aa24.26■■□□□ 1.47
ERBB2-221ENST00000584888 KLHL34Q8N239 644 aa24.26■■□□□ 1.47
ERBB2-221ENST00000584888 COL24A1Q17RW2 1714 aa24.25■■□□□ 1.47
ERBB2-221ENST00000584888 CC2D1BQ5T0F9 858 aaKnown RBP24.25■■□□□ 1.47
ERBB2-221ENST00000584888 TMOD3Q9NYL9 352 aa24.24■■□□□ 1.47
ERBB2-221ENST00000584888 PLEKHG2Q9H7P9 1386 aa24.24■■□□□ 1.47
ERBB2-221ENST00000584888 IL13P35225 146 aa24.23■■□□□ 1.47
ERBB2-221ENST00000584888 MTHFSP49914 203 aa24.23■■□□□ 1.47
ERBB2-221ENST00000584888 FLAD1Q8NFF5 587 aa24.23■■□□□ 1.47
ERBB2-221ENST00000584888 C5P01031 1676 aa24.23■■□□□ 1.47
ERBB2-221ENST00000584888 LOC102724428A0A0B4J2F2 783 aa24.21■■□□□ 1.47
ERBB2-221ENST00000584888 SIK1P57059 783 aa24.21■■□□□ 1.47
ERBB2-221ENST00000584888 MSL1Q68DK7 614 aa24.21■■□□□ 1.47
ERBB2-221ENST00000584888 ASAP1Q9ULH1 1129 aa24.21■■□□□ 1.47
ERBB2-221ENST00000584888 AK7Q96M32 723 aa24.2■■□□□ 1.46
ERBB2-221ENST00000584888 TAF1LQ8IZX4 1826 aa24.19■■□□□ 1.46
ERBB2-221ENST00000584888 GPR162Q16538 588 aa24.19■■□□□ 1.46
ERBB2-221ENST00000584888 PLEKHO1Q53GL0 409 aaPredicted RBP24.18■■□□□ 1.46
ERBB2-221ENST00000584888 AMIGO3Q86WK7 504 aa24.18■■□□□ 1.46
ERBB2-221ENST00000584888 NLGN2Q8NFZ4 835 aa24.18■■□□□ 1.46
ERBB2-221ENST00000584888 LINC00116Q8NCU8 138 aa24.17■■□□□ 1.46
ERBB2-221ENST00000584888 ATG3Q9NT62 314 aa24.17■■□□□ 1.46
ERBB2-221ENST00000584888 C4BP0C0L5 1744 aa24.17■■□□□ 1.46
ERBB2-221ENST00000584888 KDRP35968 1356 aa24.16■■□□□ 1.46
ERBB2-221ENST00000584888 SMIM5Q71RC9 77 aa24.16■■□□□ 1.46
ERBB2-221ENST00000584888 ERVV-2B6SEH9 535 aa24.15■■□□□ 1.46
ERBB2-221ENST00000584888 HSP90AB1P08238 724 aaKnown RBP24.15■■□□□ 1.46
ERBB2-221ENST00000584888 ATP6V1AP38606 617 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms