RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 HSP90AB2PQ58FF8 381 aa28.34■■■□□ 2.13
TOP3A-219ENST00000584887 RAPGEF4Q8WZA2 1011 aa28.34■■■□□ 2.13
TOP3A-219ENST00000584887 FLT4P35916 1363 aa28.34■■■□□ 2.13
TOP3A-219ENST00000584887 PRIM1P49642 420 aaKnown RBP28.32■■■□□ 2.12
TOP3A-219ENST00000584887 CCER1Q8TC90 406 aaPredicted RBP28.32■■■□□ 2.12
TOP3A-219ENST00000584887 INSRP06213 1382 aa28.32■■■□□ 2.12
TOP3A-219ENST00000584887 DOT1LQ8TEK3 1739 aa28.31■■■□□ 2.12
TOP3A-219ENST00000584887 PPM1GO15355 546 aaPredicted RBP28.3■■■□□ 2.12
TOP3A-219ENST00000584887 EMILIN1Q9Y6C2 1016 aa28.3■■■□□ 2.12
TOP3A-219ENST00000584887 SHANK3Q9BYB0 1731 aa28.29■■■□□ 2.12
TOP3A-219ENST00000584887 TATP17735 454 aaPredicted RBP28.29■■■□□ 2.12
TOP3A-219ENST00000584887 ZNF827Q17R98 1081 aa28.29■■■□□ 2.12
TOP3A-219ENST00000584887 LRRC4BQ9NT99 713 aa28.29■■■□□ 2.12
TOP3A-219ENST00000584887 PAPPAQ13219 1627 aa28.29■■■□□ 2.12
TOP3A-219ENST00000584887 CGNL1Q0VF96 1302 aa28.27■■■□□ 2.12
TOP3A-219ENST00000584887 DCAF8L1A6NGE4 600 aa28.27■■■□□ 2.12
TOP3A-219ENST00000584887 KIF24Q5T7B8 1368 aa28.26■■■□□ 2.12
TOP3A-219ENST00000584887 PTGER2P43116 358 aa28.26■■■□□ 2.11
TOP3A-219ENST00000584887 KCNQ4P56696 695 aa28.26■■■□□ 2.11
TOP3A-219ENST00000584887 MTFR1LQ9H019 292 aa28.26■■■□□ 2.11
TOP3A-219ENST00000584887 SLC27A3Q5K4L6 730 aa28.25■■■□□ 2.11
TOP3A-219ENST00000584887 EIF4G2P78344 907 aaKnown RBP eCLIP28.24■■■□□ 2.11
TOP3A-219ENST00000584887 NSD2O96028 1365 aa28.24■■■□□ 2.11
TOP3A-219ENST00000584887 HSPA5P11021 654 aaKnown RBP28.23■■■□□ 2.11
TOP3A-219ENST00000584887 PCDH11XQ9BZA7 1347 aa28.21■■■□□ 2.11
TOP3A-219ENST00000584887 PCDH11YQ9BZA8 1340 aa28.21■■■□□ 2.11
TOP3A-219ENST00000584887 TNNT2P45379 298 aaPredicted RBP28.19■■■□□ 2.1
TOP3A-219ENST00000584887 AKT1S1Q96B36 256 aa28.19■■■□□ 2.1
TOP3A-219ENST00000584887 FHDC1Q9C0D6 1143 aaPredicted RBP28.18■■■□□ 2.1
TOP3A-219ENST00000584887 TFCP2L1Q9NZI6 479 aa28.18■■■□□ 2.1
TOP3A-219ENST00000584887 CCNL1Q9UK58 526 aaPredicted RBP28.18■■■□□ 2.1
TOP3A-219ENST00000584887 YY1P25490 414 aa28.16■■■□□ 2.1
TOP3A-219ENST00000584887 SGIP1Q9BQI5 828 aa28.15■■■□□ 2.1
TOP3A-219ENST00000584887 MAP2P11137 1827 aaKnown RBP28.15■■■□□ 2.1
TOP3A-219ENST00000584887 WASHC2AQ641Q2 1341 aa28.15■■■□□ 2.1
TOP3A-219ENST00000584887 LY75O60449 1722 aa28.15■■■□□ 2.1
TOP3A-219ENST00000584887 ARXQ96QS3 562 aa28.14■■■□□ 2.1
TOP3A-219ENST00000584887 ANKRD26Q9UPS8 1709 aa28.14■■■□□ 2.1
TOP3A-219ENST00000584887 CYP27B1O15528 508 aa28.13■■■□□ 2.09
TOP3A-219ENST00000584887 PANK3Q9H999 370 aa28.13■■■□□ 2.09
TOP3A-219ENST00000584887 POLKQ9UBT6 870 aa28.13■■■□□ 2.09
TOP3A-219ENST00000584887 PNPLA7Q6ZV29 1317 aa28.13■■■□□ 2.09
TOP3A-219ENST00000584887 MPRIPQ6WCQ1 1025 aa28.12■■■□□ 2.09
TOP3A-219ENST00000584887 SYT17Q9BSW7 474 aa28.12■■■□□ 2.09
TOP3A-219ENST00000584887 EYA1Q99502 592 aa28.11■■■□□ 2.09
TOP3A-219ENST00000584887 KLHL34Q8N239 644 aa28.1■■■□□ 2.09
TOP3A-219ENST00000584887 SPG7Q9UQ90 795 aa28.1■■■□□ 2.09
TOP3A-219ENST00000584887 TUBGCP6Q96RT7 1819 aa28.09■■■□□ 2.09
TOP3A-219ENST00000584887 MSH5O43196 834 aa28.09■■■□□ 2.09
TOP3A-219ENST00000584887 SLC16A10Q8TF71 515 aa28.09■■■□□ 2.09
TOP3A-219ENST00000584887 PKD1L3Q7Z443 1732 aa28.09■■■□□ 2.09
TOP3A-219ENST00000584887 NCAPD2Q15021 1401 aa28.09■■■□□ 2.09
TOP3A-219ENST00000584887 QSER1Q2KHR3 1735 aa28.08■■■□□ 2.09
TOP3A-219ENST00000584887 PALLDQ8WX93 1383 aa28.08■■■□□ 2.09
TOP3A-219ENST00000584887 POLD1P28340 1107 aa28.07■■■□□ 2.08
TOP3A-219ENST00000584887 EIF4A2Q14240 407 aaKnown RBP28.06■■■□□ 2.08
TOP3A-219ENST00000584887 TOGARAM1Q9Y4F4 1720 aa28.05■■■□□ 2.08
TOP3A-219ENST00000584887 ITGB4P16144 1822 aa28.02■■■□□ 2.08
TOP3A-219ENST00000584887 SMARCC1Q92922 1105 aaPredicted RBP28.01■■■□□ 2.07
TOP3A-219ENST00000584887 C5P01031 1676 aa28■■■□□ 2.07
TOP3A-219ENST00000584887 MORC1Q86VD1 984 aa28■■■□□ 2.07
TOP3A-219ENST00000584887 COL23A1Q86Y22 540 aaPredicted RBP28■■■□□ 2.07
TOP3A-219ENST00000584887 PIGBQ92521 554 aa28■■■□□ 2.07
TOP3A-219ENST00000584887 NKX1-1Q15270 411 aaPredicted RBP27.99■■■□□ 2.07
TOP3A-219ENST00000584887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.99■■■□□ 2.07
TOP3A-219ENST00000584887 MAP3K5Q99683 1374 aa27.99■■■□□ 2.07
TOP3A-219ENST00000584887 MSL1Q68DK7 614 aa27.98■■■□□ 2.07
TOP3A-219ENST00000584887 TMOD3Q9NYL9 352 aa27.98■■■□□ 2.07
TOP3A-219ENST00000584887 KNSTRNQ9Y448 316 aa27.98■■■□□ 2.07
TOP3A-219ENST00000584887 IFNL2Q8IZJ0 200 aa27.97■■■□□ 2.07
TOP3A-219ENST00000584887 PHKG2P15735 406 aa27.96■■■□□ 2.07
TOP3A-219ENST00000584887 HMGB2P26583 209 aaKnown RBP27.95■■■□□ 2.06
TOP3A-219ENST00000584887 AK7Q96M32 723 aa27.95■■■□□ 2.06
TOP3A-219ENST00000584887 IGSF1Q8N6C5 1336 aa27.94■■■□□ 2.06
TOP3A-219ENST00000584887 PELP1Q8IZL8 1130 aaKnown RBP27.94■■■□□ 2.06
TOP3A-219ENST00000584887 TAF1LQ8IZX4 1826 aa27.94■■■□□ 2.06
TOP3A-219ENST00000584887 GPR162Q16538 588 aa27.93■■■□□ 2.06
TOP3A-219ENST00000584887 COL24A1Q17RW2 1714 aa27.92■■■□□ 2.06
TOP3A-219ENST00000584887 FLAD1Q8NFF5 587 aa27.91■■■□□ 2.06
TOP3A-219ENST00000584887 ASAP1Q9ULH1 1129 aa27.91■■■□□ 2.06
TOP3A-219ENST00000584887 C4BP0C0L5 1744 aa27.91■■■□□ 2.06
TOP3A-219ENST00000584887 LOC102724428A0A0B4J2F2 783 aa27.9■■■□□ 2.06
TOP3A-219ENST00000584887 PHF14O94880 888 aa27.9■■■□□ 2.06
TOP3A-219ENST00000584887 SIK1P57059 783 aa27.9■■■□□ 2.06
TOP3A-219ENST00000584887 KIF7Q2M1P5 1343 aa27.9■■■□□ 2.06
TOP3A-219ENST00000584887 NLGN2Q8NFZ4 835 aa27.89■■■□□ 2.06
TOP3A-219ENST00000584887 PLEKHO1Q53GL0 409 aaPredicted RBP27.88■■■□□ 2.05
TOP3A-219ENST00000584887 ZNF530Q6P9A1 599 aaPredicted RBP27.88■■■□□ 2.05
TOP3A-219ENST00000584887 SMIM5Q71RC9 77 aa27.87■■■□□ 2.05
TOP3A-219ENST00000584887 AEBP1Q8IUX7 1158 aa27.87■■■□□ 2.05
TOP3A-219ENST00000584887 LINC00116Q8NCU8 138 aa27.86■■■□□ 2.05
TOP3A-219ENST00000584887 PLEKHG2Q9H7P9 1386 aa27.86■■■□□ 2.05
TOP3A-219ENST00000584887 ATP6V1AP38606 617 aa27.85■■■□□ 2.05
TOP3A-219ENST00000584887 AMIGO3Q86WK7 504 aa27.85■■■□□ 2.05
TOP3A-219ENST00000584887 ATG3Q9NT62 314 aa27.85■■■□□ 2.05
TOP3A-219ENST00000584887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.84■■■□□ 2.05
TOP3A-219ENST00000584887 HSP90AB1P08238 724 aaKnown RBP27.84■■■□□ 2.05
TOP3A-219ENST00000584887 ITPK1Q13572 414 aa27.83■■■□□ 2.05
TOP3A-219ENST00000584887 AMER1Q5JTC6 1135 aaPredicted RBP27.83■■■□□ 2.05
TOP3A-219ENST00000584887 GNPATO15228 680 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms